BLASTX nr result

ID: Cheilocostus21_contig00021434 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021434
         (592 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009385907.1| PREDICTED: probable E3 ubiquitin-protein lig...   105   7e-23
ref|XP_009414799.1| PREDICTED: E3 ubiquitin-protein ligase MBR2-...   103   2e-22
ref|XP_009414783.1| PREDICTED: E3 ubiquitin-protein ligase MBR2-...   103   2e-22

>ref|XP_009385907.1| PREDICTED: probable E3 ubiquitin-protein ligase RHG1A [Musa
           acuminata subsp. malaccensis]
 ref|XP_018676868.1| PREDICTED: probable E3 ubiquitin-protein ligase RHG1A [Musa
           acuminata subsp. malaccensis]
          Length = 548

 Score =  105 bits (262), Expect = 7e-23
 Identities = 74/185 (40%), Positives = 102/185 (55%), Gaps = 16/185 (8%)
 Frame = -1

Query: 592 GCSITLEDQKHHDRNTRYCSRLGCCASLYSMKST-----NRAE------EXXXXXXXXXX 446
           GC ITL +Q +HDR+ R CSRLGC ASLY+MK T     +RA       +          
Sbjct: 19  GCIITLREQNYHDRSIRCCSRLGCSASLYAMKGTQVGKQDRASFHSGPCQSLSANGFRKP 78

Query: 445 XXXXXXXXSNEENDEAESSHRQGDNHKLKCSDKYLDKKDSVSKRRLDKKEKSHAIGLRPL 266
                   S EE + AES + + D+ K K   ++   KDS S R ++ K+  H++ L PL
Sbjct: 79  QRGQRSSCSREEANVAESRNTRRDSDKPKSGRRFTGIKDSDSNRSVENKKDLHSVPLSPL 138

Query: 265 VESAKVHRFSD-ATGELGSCRTRLSSSTRASGEVTKQPRYCYRENSGA----TVSNSDAS 101
           V SAK+   SD ATG +GS R +L + T  S E  +QPRY Y ENS A    ++S+ DAS
Sbjct: 139 VGSAKLRCSSDSATGGVGSSRMKLRAIT--SKEAARQPRYRYIENSSASGCTSMSHGDAS 196

Query: 100 NFLSS 86
           + ++S
Sbjct: 197 HDMAS 201


>ref|XP_009414799.1| PREDICTED: E3 ubiquitin-protein ligase MBR2-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 452

 Score =  103 bits (257), Expect = 2e-22
 Identities = 75/204 (36%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
 Frame = -1

Query: 592 GCSITLEDQKHHDRNTRYCSRLGCCASLYSMKSTNRAEEXXXXXXXXXXXXXXXXXXSN- 416
           GCSIT  +Q HH R+ R CSRLGC A+ YSMK T   E+                     
Sbjct: 19  GCSITFREQNHHARSIRSCSRLGCGANFYSMKGTKVGEQDKAPFHTGSSKLLPASSFRRP 78

Query: 415 ----------EENDEAESSHRQGDNHKLKCSDKYLDKKDSVSKRRLDKKEKSHAIGLRPL 266
                     EE D AESS+ Q ++ K+KC+ + LD KDS S+R L KKE SH+      
Sbjct: 79  QRGGRTRRSPEEADVAESSNSQRESDKIKCTSRSLDIKDSDSRRGLGKKEDSHS------ 132

Query: 265 VESAKVHRFSDATGELGSCRTRLSSSTRASGEVTKQPRYCYRENSGATVSNSDA------ 104
                       TGE  SC  +L S T  S EVT+Q RY Y++N     S S A      
Sbjct: 133 -----------TTGEEESCSNKLRSKT--SKEVTRQSRYHYKDNLSTFASTSMAHAYGLE 179

Query: 103 -------SNFLSSGFHYAGSGIGR 53
                  SN   SGF+   SG  R
Sbjct: 180 NPTRAGVSNVRPSGFNSPNSGSSR 203


>ref|XP_009414783.1| PREDICTED: E3 ubiquitin-protein ligase MBR2-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 468

 Score =  103 bits (257), Expect = 2e-22
 Identities = 75/204 (36%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
 Frame = -1

Query: 592 GCSITLEDQKHHDRNTRYCSRLGCCASLYSMKSTNRAEEXXXXXXXXXXXXXXXXXXSN- 416
           GCSIT  +Q HH R+ R CSRLGC A+ YSMK T   E+                     
Sbjct: 19  GCSITFREQNHHARSIRSCSRLGCGANFYSMKGTKVGEQDKAPFHTGSSKLLPASSFRRP 78

Query: 415 ----------EENDEAESSHRQGDNHKLKCSDKYLDKKDSVSKRRLDKKEKSHAIGLRPL 266
                     EE D AESS+ Q ++ K+KC+ + LD KDS S+R L KKE SH+      
Sbjct: 79  QRGGRTRRSPEEADVAESSNSQRESDKIKCTSRSLDIKDSDSRRGLGKKEDSHS------ 132

Query: 265 VESAKVHRFSDATGELGSCRTRLSSSTRASGEVTKQPRYCYRENSGATVSNSDA------ 104
                       TGE  SC  +L S T  S EVT+Q RY Y++N     S S A      
Sbjct: 133 -----------TTGEEESCSNKLRSKT--SKEVTRQSRYHYKDNLSTFASTSMAHAYGLE 179

Query: 103 -------SNFLSSGFHYAGSGIGR 53
                  SN   SGF+   SG  R
Sbjct: 180 NPTRAGVSNVRPSGFNSPNSGSSR 203


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