BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021416
         (1021 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009419842.1| PREDICTED: sigma factor binding protein 1, c...    69   1e-10
ref|XP_009391619.1| PREDICTED: sigma factor binding protein 1, c...    64   1e-08
ref|XP_009384967.1| PREDICTED: sigma factor binding protein 1, c...    62   6e-08
ref|XP_009417954.1| PREDICTED: sigma factor binding protein 1, c...    58   5e-07
ref|XP_020688252.1| sigma factor binding protein 1, chloroplasti...    56   3e-06
ref|XP_008443611.1| PREDICTED: uncharacterized protein LOC103487...    57   3e-06
ref|XP_011652185.1| PREDICTED: uncharacterized protein LOC105434...    56   7e-06
ref|XP_009393094.1| PREDICTED: uncharacterized protein LOC103978...    55   7e-06
ref|XP_022147780.1| sigma factor binding protein 2, chloroplasti...    56   7e-06
ref|XP_010056024.1| PREDICTED: uncharacterized protein LOC104444...    56   8e-06

>ref|XP_009419842.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like [Musa
           acuminata subsp. malaccensis]
          Length = 141

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 60/165 (36%), Positives = 73/165 (44%), Gaps = 24/165 (14%)
 Frame = +2

Query: 254 MERPLSSRRKCLKRSK--------PLKVVYISNPVRVTTSVATFRALVQKLTGRXXXXXX 409
           MER +   RKCLKRSK        P+KVVYISNP+RVTTS ATFRALVQKLTGR      
Sbjct: 2   MERQIV-HRKCLKRSKTIVRKKKKPIKVVYISNPMRVTTSAATFRALVQKLTGR------ 54

Query: 410 XXXXXXXXXXEQYLVDVGTTPGGIADDS------VATNGXXXXXXXXXXXXXXXXVDACN 571
                     +  + D  T    +  +S       +                   V+A N
Sbjct: 55  ----------DSLVADTNTVSASLVHESTDEPPVASAAASESPSSMLSSLTVSCTVEAYN 104

Query: 572 SL-----VFDEAFDAQTLLEDFCGLLSTA-----AAAALYDYDRI 676
           SL     VFDE        E+FCGL+S+        A L  YD +
Sbjct: 105 SLVAPTVVFDE--------ENFCGLMSSTLYHERQLAGLGSYDEV 141


>ref|XP_009391619.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like [Musa
           acuminata subsp. malaccensis]
          Length = 147

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 37/50 (74%), Positives = 40/50 (80%), Gaps = 4/50 (8%)
 Frame = +2

Query: 254 MERPLSSRRKCLKRSK----PLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           MER L   RK LKRSK    P+KVVYI+NPVRVTTS ATFR+LVQKLTGR
Sbjct: 1   MER-LGVHRKRLKRSKGKTKPIKVVYIANPVRVTTSAATFRSLVQKLTGR 49


>ref|XP_009384967.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like [Musa
           acuminata subsp. malaccensis]
          Length = 140

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +2

Query: 263 PLSSRRKCLKRSKPLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           P  ++ K  K+ KP+KVVYISNP+RVTTS A FR LVQKLTGR
Sbjct: 11  PEQAKAKATKKKKPIKVVYISNPMRVTTSAAQFRGLVQKLTGR 53


>ref|XP_009417954.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like [Musa
           acuminata subsp. malaccensis]
          Length = 112

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 49/128 (38%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
 Frame = +2

Query: 281 KCLKRSK-----PLKVVYISNPVRVTTSVATFRALVQKLTGRXXXXXXXXXXXXXXXXEQ 445
           KCLKRSK     P+KVVYIS+P+RVT + ATFR+LVQ+LTGR                  
Sbjct: 9   KCLKRSKAAKKTPIKVVYISDPMRVTATAATFRSLVQRLTGRDSV--------------- 53

Query: 446 YLVDVGTTPGGIADDSVATNGXXXXXXXXXXXXXXXXVDACNSLV-----FDEAFDAQTL 610
               + TT     D S A+                  V+  NSLV     FDEAF A+ +
Sbjct: 54  ----LETTD----DSSTASASPSAASSTPSNHGVSCNVEQENSLVAPIEAFDEAFVAR-M 104

Query: 611 LEDFCGLL 634
           LE F G +
Sbjct: 105 LESFSGFM 112


>ref|XP_020688252.1| sigma factor binding protein 1, chloroplastic-like [Dendrobium
           catenatum]
 gb|PKU76387.1| Sigma factor binding protein 1, chloroplastic [Dendrobium
           catenatum]
          Length = 125

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = +2

Query: 263 PLSSRRKCLKRSKPLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           P  S  K  K+ KPLKVVYISNP+RVTTS   FR +VQ+LTGR
Sbjct: 13  PKKSDAKPSKKQKPLKVVYISNPIRVTTSADGFRGVVQELTGR 55


>ref|XP_008443611.1| PREDICTED: uncharacterized protein LOC103487167 [Cucumis melo]
          Length = 142

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +2

Query: 239 STV*EMERPLSSRRKCLKRSKPLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           +T  + ++    R+ C +  +PLKVVYISNP+RV TS + FRALVQ+LTGR
Sbjct: 12  TTTTKKKKTTRKRKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELTGR 62


>ref|XP_011652185.1| PREDICTED: uncharacterized protein LOC105434994 [Cucumis sativus]
 gb|KGN59442.1| hypothetical protein Csa_3G820480 [Cucumis sativus]
          Length = 144

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +2

Query: 275 RRKCLKRSKPLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           R+ C +  +PLKVVYISNP+RV TS + FRALVQ+LTGR
Sbjct: 24  RKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELTGR 62


>ref|XP_009393094.1| PREDICTED: uncharacterized protein LOC103978871 [Musa acuminata
           subsp. malaccensis]
          Length = 129

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 272 SRRKCLKRSKPLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           S R+   + KP+KVVYISNP+RVTTS A FR LVQKLTGR
Sbjct: 10  SPREGKAKKKPVKVVYISNPLRVTTSPAKFRGLVQKLTGR 49


>ref|XP_022147780.1| sigma factor binding protein 2, chloroplastic-like [Momordica
           charantia]
          Length = 146

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 26/46 (56%), Positives = 37/46 (80%)
 Frame = +2

Query: 254 MERPLSSRRKCLKRSKPLKVVYISNPVRVTTSVATFRALVQKLTGR 391
           M++    R+  +++++PLKVVYISNP+RV TS + FRALVQ+LTGR
Sbjct: 13  MKKETRKRKLSVQKNQPLKVVYISNPMRVHTSASEFRALVQELTGR 58


>ref|XP_010056024.1| PREDICTED: uncharacterized protein LOC104444112 [Eucalyptus
           grandis]
 gb|KCW90039.1| hypothetical protein EUGRSUZ_A02242 [Eucalyptus grandis]
          Length = 155

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
 Frame = +2

Query: 275 RRKCLKRSKP----LKVVYISNPVRVTTSVATFRALVQKLTGR 391
           +RK  KRSKP    +KVVYISNP+RV TS + FRALVQKLTGR
Sbjct: 10  KRKPTKRSKPKSKPIKVVYISNPMRVKTSASQFRALVQKLTGR 52