BLASTX nr result
ID: Cheilocostus21_contig00021230
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00021230
(505 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018675394.1| PREDICTED: probable mediator of RNA polymera... 108 4e-25
ref|XP_018675368.1| PREDICTED: probable mediator of RNA polymera... 108 4e-25
ref|XP_009403499.1| PREDICTED: probable mediator of RNA polymera... 108 4e-25
ref|XP_009403491.1| PREDICTED: probable mediator of RNA polymera... 108 4e-25
ref|XP_020107512.1| probable mediator of RNA polymerase II trans... 105 2e-24
ref|XP_009404348.1| PREDICTED: probable mediator of RNA polymera... 105 4e-24
ref|XP_008781431.1| PREDICTED: probable mediator of RNA polymera... 105 4e-24
gb|OVA03327.1| Transcription elongation factor [Macleaya cordata] 105 7e-24
ref|XP_019708190.1| PREDICTED: LOW QUALITY PROTEIN: probable med... 105 8e-24
gb|OAY74023.1| putative mediator of RNA polymerase II transcript... 105 1e-23
ref|XP_008781432.2| PREDICTED: probable mediator of RNA polymera... 105 1e-23
ref|XP_010912441.1| PREDICTED: probable mediator of RNA polymera... 104 2e-23
gb|ABA95891.2| transcription elongation factor, putative, expres... 100 4e-23
gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japo... 100 5e-23
ref|XP_008784173.1| PREDICTED: probable mediator of RNA polymera... 101 2e-22
ref|XP_015620788.1| PREDICTED: probable mediator of RNA polymera... 100 3e-22
ref|XP_015698815.1| PREDICTED: probable mediator of RNA polymera... 98 5e-22
ref|XP_009414836.1| PREDICTED: probable mediator of RNA polymera... 100 6e-22
ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymera... 99 9e-22
ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera... 99 2e-21
>ref|XP_018675394.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X4 [Musa acuminata subsp.
malaccensis]
Length = 345
Score = 108 bits (270), Expect = 4e-25
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +2
Query: 11 ASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGFVR 190
++P K KE+KD L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPK KN F R
Sbjct: 277 SAPPPKPKEEKDGLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKQKNTFTR 336
Query: 191 KGGIQGKH 214
KGG QGKH
Sbjct: 337 KGGFQGKH 344
>ref|XP_018675368.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Musa acuminata subsp.
malaccensis]
Length = 346
Score = 108 bits (270), Expect = 4e-25
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +2
Query: 11 ASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGFVR 190
++P K KE+KD L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPK KN F R
Sbjct: 278 SAPPPKPKEEKDGLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKQKNTFTR 337
Query: 191 KGGIQGKH 214
KGG QGKH
Sbjct: 338 KGGFQGKH 345
>ref|XP_009403499.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 346
Score = 108 bits (270), Expect = 4e-25
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +2
Query: 11 ASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGFVR 190
++P K KE+KD L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPK KN F R
Sbjct: 278 SAPPPKPKEEKDGLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKQKNTFTR 337
Query: 191 KGGIQGKH 214
KGG QGKH
Sbjct: 338 KGGFQGKH 345
>ref|XP_009403491.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 347
Score = 108 bits (270), Expect = 4e-25
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +2
Query: 11 ASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGFVR 190
++P K KE+KD L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPK KN F R
Sbjct: 279 SAPPPKPKEEKDGLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKQKNTFTR 338
Query: 191 KGGIQGKH 214
KGG QGKH
Sbjct: 339 KGGFQGKH 346
>ref|XP_020107512.1| probable mediator of RNA polymerase II transcription subunit 26c,
partial [Ananas comosus]
Length = 268
Score = 105 bits (261), Expect = 2e-24
Identities = 54/71 (76%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMD-AERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
SSA+PA KEQK++L+D E+LASAR+RL ENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 197 SSAAPAKLIKEQKESLLDDPEKLASARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNT 256
Query: 182 FVRKGGIQGKH 214
FVRK GIQ KH
Sbjct: 257 FVRKSGIQAKH 267
>ref|XP_009404348.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Musa acuminata subsp. malaccensis]
Length = 347
Score = 105 bits (263), Expect = 4e-24
Identities = 55/71 (77%), Positives = 58/71 (81%)
Frame = +2
Query: 2 PSSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
PSSASPA K KE KD+L+D ERLASARKRLHENY EAQNAKK RTIQVMDIH+IPKPK
Sbjct: 279 PSSASPAHKLKEHKDSLLDPERLASARKRLHENYQEAQNAKKQRTIQVMDIHQIPKPK-- 336
Query: 182 FVRKGGIQGKH 214
RKGG KH
Sbjct: 337 IPRKGGSMWKH 347
>ref|XP_008781431.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Phoenix dactylifera]
ref|XP_008781433.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Phoenix dactylifera]
Length = 354
Score = 105 bits (263), Expect = 4e-24
Identities = 53/73 (72%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 PSSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
PS+ASP A EQ+ +L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 281 PSAASPPANANEQRHSLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNS 340
Query: 182 FVRK--GGIQGKH 214
FVR G Q KH
Sbjct: 341 FVRNKGSGFQAKH 353
>gb|OVA03327.1| Transcription elongation factor [Macleaya cordata]
Length = 339
Score = 105 bits (261), Expect = 7e-24
Identities = 52/72 (72%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGF 184
SS++P + ++QKDNLMD ERLASAR+RLHENY EAQNAKK RTIQVMDIH+IPKPKN F
Sbjct: 267 SSSAPNKQREQQKDNLMDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNSF 326
Query: 185 V--RKGGIQGKH 214
KGG Q KH
Sbjct: 327 FAKNKGGFQAKH 338
>ref|XP_019708190.1| PREDICTED: LOW QUALITY PROTEIN: probable mediator of RNA polymerase
II transcription subunit 26c [Elaeis guineensis]
Length = 354
Score = 105 bits (261), Expect = 8e-24
Identities = 53/73 (72%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 PSSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
PS+ SP A EQK +L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 281 PSALSPPANANEQKHSLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNS 340
Query: 182 FVRK--GGIQGKH 214
FVR G Q KH
Sbjct: 341 FVRNKGSGFQAKH 353
>gb|OAY74023.1| putative mediator of RNA polymerase II transcription subunit 26c
[Ananas comosus]
Length = 367
Score = 105 bits (261), Expect = 1e-23
Identities = 54/71 (76%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMD-AERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
SSA+PA KEQK++L+D E+LASAR+RL ENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 296 SSATPAKLIKEQKESLLDDPEKLASARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNT 355
Query: 182 FVRKGGIQGKH 214
FVRK GIQ KH
Sbjct: 356 FVRKSGIQAKH 366
>ref|XP_008781432.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Phoenix dactylifera]
Length = 438
Score = 105 bits (263), Expect = 1e-23
Identities = 53/73 (72%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 PSSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
PS+ASP A EQ+ +L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 365 PSAASPPANANEQRHSLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNS 424
Query: 182 FVRK--GGIQGKH 214
FVR G Q KH
Sbjct: 425 FVRNKGSGFQAKH 437
>ref|XP_010912441.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Elaeis guineensis]
Length = 350
Score = 104 bits (259), Expect = 2e-23
Identities = 54/72 (75%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 PSSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
PS+ SPA K +D+L+DAERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 282 PSAPSPAAK----EDSLLDAERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNS 337
Query: 182 FVR-KGGIQGKH 214
F+R KGG Q KH
Sbjct: 338 FMRNKGGFQAKH 349
>gb|ABA95891.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 229
Score = 100 bits (250), Expect = 4e-23
Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPK--N 178
SS++P +EQKDNLMD E+L SARKRL ENY EAQNAKK RTIQVMDIH+IPKPK N
Sbjct: 155 SSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRN 214
Query: 179 GFVRK--GGIQGKH 214
F+RK GG+ GKH
Sbjct: 215 AFIRKGGGGLPGKH 228
>gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japonica Group]
Length = 241
Score = 100 bits (250), Expect = 5e-23
Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPK--N 178
SS++P +EQKDNLMD E+L SARKRL ENY EAQNAKK RTIQVMDIH+IPKPK N
Sbjct: 167 SSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRN 226
Query: 179 GFVRK--GGIQGKH 214
F+RK GG+ GKH
Sbjct: 227 AFIRKGGGGLPGKH 240
>ref|XP_008784173.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Phoenix dactylifera]
Length = 350
Score = 101 bits (251), Expect = 2e-22
Identities = 53/72 (73%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 PSSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNG 181
PS+ SPA K +D+L+D ERLASAR+RLHENY EAQNAKK RTIQVMDIHEIPKPKN
Sbjct: 282 PSAPSPAAK----EDSLLDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNT 337
Query: 182 FVR-KGGIQGKH 214
F R KGG Q KH
Sbjct: 338 FTRNKGGFQAKH 349
>ref|XP_015620788.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Oryza sativa Japonica Group]
gb|ABA95889.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
dbj|BAF29263.1| Os12g0165700 [Oryza sativa Japonica Group]
gb|EAY82385.1| hypothetical protein OsI_37597 [Oryza sativa Indica Group]
dbj|BAT16027.1| Os12g0165700 [Oryza sativa Japonica Group]
Length = 340
Score = 100 bits (250), Expect = 3e-22
Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPK--N 178
SS++P +EQKDNLMD E+L SARKRL ENY EAQNAKK RTIQVMDIH+IPKPK N
Sbjct: 266 SSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRN 325
Query: 179 GFVRK--GGIQGKH 214
F+RK GG+ GKH
Sbjct: 326 AFIRKGGGGLPGKH 339
>ref|XP_015698815.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Oryza brachyantha]
Length = 241
Score = 98.2 bits (243), Expect = 5e-22
Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPK--N 178
SS++P +EQKD LMD E+L SARKRL ENY EAQNAKK RTIQVMDIH+IPKPK N
Sbjct: 167 SSSAPVRTMREQKDTLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRN 226
Query: 179 GFVRK--GGIQGKH 214
F+RK GG+ GKH
Sbjct: 227 AFIRKGGGGLPGKH 240
>ref|XP_009414836.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Musa acuminata subsp.
malaccensis]
Length = 325
Score = 99.8 bits (247), Expect = 6e-22
Identities = 50/69 (72%), Positives = 55/69 (79%)
Frame = +2
Query: 8 SASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGFV 187
SA+P+ K L+D E+LASAR+RLHENY EAQNAKK RTIQVMDIHEIPKPKN FV
Sbjct: 261 SAAPSTSQK-----LLDPEKLASARRRLHENYREAQNAKKQRTIQVMDIHEIPKPKNSFV 315
Query: 188 RKGGIQGKH 214
RKGG Q KH
Sbjct: 316 RKGGFQAKH 324
>ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Vitis vinifera]
ref|XP_010665135.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Vitis vinifera]
emb|CBI18212.3| unnamed protein product, partial [Vitis vinifera]
Length = 332
Score = 99.4 bits (246), Expect = 9e-22
Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Frame = +2
Query: 2 PSSASPAL-KAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKN 178
P S AL K +EQKD+L+D E+LASAR+RLHENY EAQNAKK RTIQVMDIH+IPKPKN
Sbjct: 258 PIPTSVALNKQREQKDSLVDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKN 317
Query: 179 GFVRK--GGIQGKH 214
F K GG+Q KH
Sbjct: 318 TFFAKNRGGVQAKH 331
>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nelumbo nucifera]
Length = 349
Score = 99.0 bits (245), Expect = 2e-21
Identities = 49/72 (68%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = +2
Query: 5 SSASPALKAKEQKDNLMDAERLASARKRLHENYLEAQNAKKNRTIQVMDIHEIPKPKNGF 184
S++ P K +EQKD+ +D ERLASAR+RLHENY EAQNAKK RTIQVMDIH+IPKPKN F
Sbjct: 277 STSVPPNKQREQKDSSIDPERLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNSF 336
Query: 185 V--RKGGIQGKH 214
KGG Q +H
Sbjct: 337 FAKNKGGFQARH 348