BLASTX nr result

ID: Cheilocostus21_contig00021205 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021205
         (668 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009388809.1| PREDICTED: protein O-linked-mannose beta-1,4...    84   3e-15
ref|XP_009398144.1| PREDICTED: EGF domain-specific O-linked N-ac...    66   1e-13
ref|XP_009410138.1| PREDICTED: uncharacterized protein LOC103992...    58   3e-06

>ref|XP_009388809.1| PREDICTED: protein O-linked-mannose
           beta-1,4-N-acetylglucosaminyltransferase 2-like [Musa
           acuminata subsp. malaccensis]
          Length = 464

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 60/186 (32%), Positives = 87/186 (46%)
 Frame = +1

Query: 109 RADSQKLKSALLRGCFLISMVLFVVYTIYAISFSCADLTMIKSSISFSCCSGRRKDGKFP 288
           R + Q+L+SALL GCFL+SM+L VVYT Y +SF         S+++F             
Sbjct: 9   RGEPQRLRSALLGGCFLLSMILLVVYTSYVVSF---------SNLTF------------- 46

Query: 289 SGMAEERETISSP*LA*KKRNLLHVWMNSQSEFPL*YQIPIRVLVSD*SVTHRCIKLKRC 468
                                    W ++Q+  P+  +   ++  SD + T         
Sbjct: 47  -------------------------WRSNQAAPPVPKE-EHKITASDPAETR-------- 72

Query: 469 *LPKVETAKQQSFI*FLKQKK*IL*MEVAIRIHGNSSAISFVVPSNTNASKLKESWKFKP 648
             P+ E   +  F  F  ++     ME  IRIHGNSS+I FV  SNTN + ++ESW+ KP
Sbjct: 73  --PQKEKLPRNPFCDFSDRRNDYCEMEGDIRIHGNSSSILFVTSSNTNGTNIQESWQLKP 130

Query: 649 HPQKGD 666
           HP+KGD
Sbjct: 131 HPRKGD 136


>ref|XP_009398144.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine
           transferase [Musa acuminata subsp. malaccensis]
          Length = 464

 Score = 65.9 bits (159), Expect(2) = 1e-13
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 544 MEVAIRIHGNSSAISFVVPSNTNASKLKESWKFKPHPQKGD 666
           ME  IRIHGNSS+I FV  SN NA+KL+ESWK KPHP+KGD
Sbjct: 96  MEGDIRIHGNSSSIFFVASSNVNATKLQESWKLKPHPRKGD 136



 Score = 38.5 bits (88), Expect(2) = 1e-13
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +2

Query: 464 DASYQKSKLQSSNPLYDSSNKRNEYCE 544
           D SYQK KL S NP  D SN+RN+YCE
Sbjct: 70  DVSYQKEKLPS-NPFCDFSNRRNDYCE 95


>ref|XP_009410138.1| PREDICTED: uncharacterized protein LOC103992231 [Musa acuminata
           subsp. malaccensis]
          Length = 469

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +1

Query: 544 MEVAIRIHGNSSAISFVVPSNTNASKLKESWKFKPHPQKGD 666
           ME  IRIH NSS+I F+  SN N ++L+ESW+ KPHP+KGD
Sbjct: 99  MEGDIRIHANSSSIFFITSSNRNTTELQESWRVKPHPRKGD 139


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