BLASTX nr result

ID: Cheilocostus21_contig00021086 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021086
         (526 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009399015.1| PREDICTED: peroxisomal membrane protein 13 [...    74   2e-12
ref|XP_008775485.1| PREDICTED: peroxisomal membrane protein 13-l...    58   8e-07
ref|NP_001306847.1| peroxisomal membrane protein 13-like [Elaeis...    56   5e-06

>ref|XP_009399015.1| PREDICTED: peroxisomal membrane protein 13 [Musa acuminata subsp.
           malaccensis]
          Length = 278

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
 Frame = +2

Query: 2   RILGIRTKPKIQQQLAPGGPGELTAPAGQHYLEGPK---GSWDGVWGDDVKGS 151
           RILGIRT+ + QQQL   GPGEL APAGQ YLEGPK   G+WD VWG+DV+GS
Sbjct: 228 RILGIRTRSRKQQQL---GPGELPAPAGQQYLEGPKAPSGAWDSVWGNDVRGS 277


>ref|XP_008775485.1| PREDICTED: peroxisomal membrane protein 13-like [Phoenix
           dactylifera]
          Length = 283

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = +2

Query: 2   RILGIRTKPKIQQQLAPGGPGELTAPAGQHYLEGPK---GSWDGVWGDDVKGSS 154
           R+LGI+T+ +   QLAPG    L    GQ Y+EGPK   GSWD VWGDDV+G+S
Sbjct: 231 RLLGIKTRTRKHPQLAPGTLPGLDGN-GQQYIEGPKATTGSWDNVWGDDVRGAS 283


>ref|NP_001306847.1| peroxisomal membrane protein 13-like [Elaeis guineensis]
 gb|AGE46029.1| putative peroxisome biogenesis factor 13 [Elaeis guineensis]
          Length = 284

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
 Frame = +2

Query: 2   RILGIRTKPKIQQQLAPGGPGELTAPAG--QHYLEGPK---GSWDGVWGDDVKGSS 154
           R+LGI+T+ +   QL PG    L  P G  QHY+EGPK   GSWD VWG+DVK +S
Sbjct: 232 RLLGIKTRSRKHPQLEPG---RLPGPDGNGQHYIEGPKAATGSWDNVWGNDVKEAS 284


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