BLASTX nr result

ID: Cheilocostus21_contig00021048 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021048
         (1017 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009419026.1| PREDICTED: E3 ubiquitin-protein ligase RNF21...    75   3e-11
ref|XP_009406585.1| PREDICTED: ATP-dependent RNA helicase DEAH12...    72   5e-10
ref|XP_020091561.1| ATP-dependent RNA helicase DEAH12, chloropla...    70   1e-09
gb|OAY80999.1| putative E3 ubiquitin-protein ligase, partial [An...    70   1e-09
ref|XP_008806705.1| PREDICTED: ATP-dependent RNA helicase DEAH12...    68   9e-09
ref|XP_010942686.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   1e-08

>ref|XP_009419026.1| PREDICTED: E3 ubiquitin-protein ligase RNF216 [Musa acuminata
           subsp. malaccensis]
          Length = 504

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 37/46 (80%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
 Frame = -2

Query: 137 MENLHGFEDELFDNSDVEDEFQSCCTED-EWQETEESLAKGSKDDL 3
           MEN++ FE ELFDNSDVEDEFQSCCTED EWQ+TEESLA+G KD+L
Sbjct: 1   MENMNSFE-ELFDNSDVEDEFQSCCTEDEEWQDTEESLAEGFKDEL 45


>ref|XP_009406585.1| PREDICTED: ATP-dependent RNA helicase DEAH12, chloroplastic [Musa
           acuminata subsp. malaccensis]
          Length = 512

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -2

Query: 146 KLKMENLHGFEDELFDNSDVEDEFQSCCTE-DEWQETEESLAKGSKDDL 3
           KL    ++GFE  LFD+SDVEDEFQSC TE DEWQ++EESLA+GSKDDL
Sbjct: 4   KLSAGRMNGFEGGLFDDSDVEDEFQSCYTEDDEWQDSEESLAEGSKDDL 52


>ref|XP_020091561.1| ATP-dependent RNA helicase DEAH12, chloroplastic [Ananas comosus]
          Length = 512

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 33/46 (71%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = -2

Query: 137 MENLHGFEDELFDNSDVEDEFQSCCTED-EWQETEESLAKGSKDDL 3
           ME+L  FED LF NSDVE+EF+SCC ED EWQ+TEESLA+G+K+DL
Sbjct: 1   MESLGDFEDSLFYNSDVEEEFRSCCAEDEEWQDTEESLAEGAKEDL 46


>gb|OAY80999.1| putative E3 ubiquitin-protein ligase, partial [Ananas comosus]
          Length = 517

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 33/46 (71%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = -2

Query: 137 MENLHGFEDELFDNSDVEDEFQSCCTED-EWQETEESLAKGSKDDL 3
           ME+L  FED LF NSDVE+EF+SCC ED EWQ+TEESLA+G+K+DL
Sbjct: 1   MESLGDFEDSLFYNSDVEEEFRSCCAEDEEWQDTEESLAEGAKEDL 46


>ref|XP_008806705.1| PREDICTED: ATP-dependent RNA helicase DEAH12, chloroplastic
           [Phoenix dactylifera]
          Length = 511

 Score = 67.8 bits (164), Expect = 9e-09
 Identities = 31/46 (67%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = -2

Query: 137 MENLHGFEDELFDNSDVEDEFQSCCTED-EWQETEESLAKGSKDDL 3
           ME L+ FEDE  DNSD E+EF+SCC ED EWQ+TEESLA+G+K++L
Sbjct: 1   METLNYFEDEPIDNSDAEEEFRSCCAEDEEWQDTEESLAEGAKEEL 46


>ref|XP_010942686.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI9 [Elaeis
           guineensis]
          Length = 511

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 31/46 (67%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = -2

Query: 137 MENLHGFEDELFDNSDVEDEFQSCCTED-EWQETEESLAKGSKDDL 3
           ME L+ FED   DNSD E+EF+SCCTED EWQ+TEESLA+G+K++L
Sbjct: 1   METLNRFEDGPIDNSDAEEEFRSCCTEDEEWQDTEESLAEGAKEEL 46


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