BLASTX nr result
ID: Cheilocostus21_contig00020994
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00020994
(1647 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 246 5e-67
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 246 5e-67
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 246 5e-67
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 245 2e-66
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 245 2e-66
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 243 5e-66
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 240 8e-65
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 239 2e-64
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 238 4e-64
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 223 5e-59
gb|ATZ69482.1| ORF3 polyprotein [Cacao swollen shoot Ghana M virus] 212 3e-55
gb|AIK01816.1| ORF3 [Piper yellow mottle virus] 208 5e-54
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574... 208 5e-54
gb|ASM61279.1| polyprotein, partial [Cacao swollen shoot virus] 192 1e-53
gb|AIK01824.1| ORF3 [Piper yellow mottle virus] 207 1e-53
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 207 2e-53
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus] 205 5e-53
gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus] 205 5e-53
gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus] 205 7e-53
gb|ASG91859.1| polyprotein [Cacao swollen shoot virus] 204 9e-53
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 246 bits (629), Expect = 5e-67
Identities = 129/212 (60%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDD--VPCRTTQ 740
+KK+ + + +S ++ SPYRPP DAAMG P SY + + T+
Sbjct: 487 MKKIEKLLSTSEVT---SPYRPPEDAAMGRP-SYPPARTIPGGGASSSAEPPRFDAARTR 542
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A QGFTD RDKIE
Sbjct: 543 FKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIE 602
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY+AL+ +GRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 603 YMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTV 662
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LER+SC ++K I+ ++N++MRLAA
Sbjct: 663 IQDEAYRELERMSCTDVKYIIPFLNEYMRLAA 694
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 246 bits (629), Expect = 5e-67
Identities = 129/212 (60%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDD--VPCRTTQ 740
+KK+ + + +S ++ SPYRPP DAAMG P SY + + T+
Sbjct: 487 MKKIEKLLSTSEVT---SPYRPPEDAAMGRP-SYPPARTIPGGGASSSAEPPRFDAARTR 542
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A QGFTD RDKIE
Sbjct: 543 FKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIE 602
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY+AL+ +GRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 603 YMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTV 662
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LER+SC ++K I+ ++N++MRLAA
Sbjct: 663 IQDEAYRELERMSCTDVKYIIPFLNEYMRLAA 694
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 246 bits (629), Expect = 5e-67
Identities = 129/212 (60%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDD--VPCRTTQ 740
+KK+ + + +S ++ SPYRPP DAAMG P SY + + T+
Sbjct: 487 MKKIEKLLSTSEVT---SPYRPPEDAAMGRP-SYPPARTIPGGGASSSAEPPRFDAARTR 542
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A QGFTD RDKIE
Sbjct: 543 FKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIE 602
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY+AL+ +GRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 603 YMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTV 662
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LER+SC ++K I+ ++N++MRLAA
Sbjct: 663 IQDEAYRELERMSCTDVKYIIPFLNEYMRLAA 694
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 245 bits (625), Expect = 2e-66
Identities = 128/212 (60%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDD--VPCRTTQ 740
+KK+ + + +S ++ SPYRPP DAAMG P SY + + T+
Sbjct: 487 MKKIEKLLSTSEVT---SPYRPPEDAAMGRP-SYPPARTIPGGGASSSAEPPRFDAARTR 542
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A QGFTD RDKI+
Sbjct: 543 FKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIK 602
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY+AL+ +GRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 603 YMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTV 662
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LER+SC ++K I+ ++N++MRLAA
Sbjct: 663 IQDEAYRELERMSCTDVKYIIPFLNEYMRLAA 694
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 245 bits (625), Expect = 2e-66
Identities = 128/212 (60%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDD--VPCRTTQ 740
+KK+ + + +S ++ SPYRPP DAAMG P SY + + T+
Sbjct: 487 MKKIEKLLSTSEVT---SPYRPPEDAAMGRP-SYPPARTIPGGGASSSAEPPRFDAARTR 542
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A QGFTD RDKI+
Sbjct: 543 FKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIK 602
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY+AL+ +GRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 603 YMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTV 662
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LER+SC ++K I+ ++N++MRLAA
Sbjct: 663 IQDEAYRELERMSCTDVKYIIPFLNEYMRLAA 694
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 243 bits (621), Expect = 5e-66
Identities = 128/212 (60%), Positives = 157/212 (74%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDD--VPCRTTQ 740
+KK+ + + +S ++ SPYRPP DAAM P SY + + T+
Sbjct: 487 MKKIEKLLSTSEVT---SPYRPPEDAAMRRP-SYPPARTIPGGGASSSAEPPRFDAARTR 542
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A QGFTD RDKIE
Sbjct: 543 FKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIE 602
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY+AL+ +GRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 603 YMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTV 662
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LER+SC ++K I+ ++N++MRLAA
Sbjct: 663 IQDEAYRELERMSCTDVKYIIPFLNEYMRLAA 694
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 240 bits (612), Expect = 8e-65
Identities = 129/212 (60%), Positives = 155/212 (73%), Gaps = 4/212 (1%)
Frame = -3
Query: 907 KLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDDVPCR----TTQ 740
K E++ S+ S PYRPP DAAMG P SY + + P R T+
Sbjct: 503 KAIEKLLST--SEVTGPYRPPDDAAMGRP-SYPPARAISEEG--MSSSNYPSRFDTARTR 557
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A Q FTD RDK+E
Sbjct: 558 FKGGYNDEMWTLPSAQQKNGAMFVLPEQLGLFNDAFSRWESVTKNHVATQSFTDVRDKME 617
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI I+WRM Y EY++LI DGRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 618 YMENLLGEIEKLIWIRWRMTYVAEYESLIAIGDGRDGTQNILSQMRRVFSLEDPAQGSTV 677
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LERLSC ++K I+ ++N+++RLAA
Sbjct: 678 IQDEAYRELERLSCTDVKYIIPFLNEYLRLAA 709
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 239 bits (609), Expect = 2e-64
Identities = 128/212 (60%), Positives = 155/212 (73%), Gaps = 4/212 (1%)
Frame = -3
Query: 907 KLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDDVPCR----TTQ 740
K E++ S+ S PYRPP DAAMG P SY + + P + T+
Sbjct: 467 KAIEKLLST--SEVTGPYRPPDDAAMGRP-SYPPARSISEEGV--SSSNYPSKFNAARTR 521
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
F+ G N+EMWTLPSAQ + GAMFV+PEQLGLF+DAF WESVTKNH+A Q FTD RDK+E
Sbjct: 522 FRGGYNDEMWTLPSAQQKNGAMFVLPEQLGLFNDAFSRWESVTKNHVATQSFTDVRDKME 581
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGEIEKLI IQWRM Y EY++LI DGRDGT NILSQMRRVF+LEDP QGST+
Sbjct: 582 YMENLLGEIEKLIWIQWRMTYVAEYESLIAIGDGRDGTQNILSQMRRVFSLEDPAQGSTV 641
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQD AY +LERLSC ++K I+ ++N+++RLAA
Sbjct: 642 IQDEAYRELERLSCTDVKYIIPFLNEYLRLAA 673
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 238 bits (607), Expect = 4e-64
Identities = 121/212 (57%), Positives = 153/212 (72%), Gaps = 2/212 (0%)
Frame = -3
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDDVPC--RTTQ 740
V K E+VYS+ S S Y PP DA MG P SY ++ P R
Sbjct: 468 VMKKLEKVYST--SEVTSRYTPPTDAVMGPP-SYPPARNINGAGTSYAAASPPNFNRRVN 524
Query: 739 FKRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIE 560
FK G N+E+W+LP AQ +GGAMFV+PEQ+G+F D F WES+TKNH+++QGFTD RDK+E
Sbjct: 525 FKAGYNDELWSLPPAQQKGGAMFVIPEQIGMFHDVFSRWESITKNHVSSQGFTDVRDKLE 584
Query: 559 YMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTM 380
YMENLLGE+EKL+ IQWRM Y EY+ L+ + +GR+GT NI+SQMRRVF+LEDP QGST+
Sbjct: 585 YMENLLGEVEKLLWIQWRMQYNAEYEELVRTGEGREGTQNIISQMRRVFSLEDPAQGSTV 644
Query: 379 IQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
IQ+ AY DLE+LSCDNIK I+ Y+N ++RLAA
Sbjct: 645 IQEEAYRDLEKLSCDNIKYIVQYLNQYLRLAA 676
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 223 bits (568), Expect = 5e-59
Identities = 118/209 (56%), Positives = 146/209 (69%), Gaps = 1/209 (0%)
Frame = -3
Query: 907 KLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQT-DDVPCRTTQFKR 731
K E+V+S+ S VS YRPP D AM P Y + R QFK+
Sbjct: 512 KNEEKVFSTQQS-EVSSYRPPQDTAM-TPAGYAPARGEASSSTHQPMFEGYMPRRPQFKQ 569
Query: 730 GMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYME 551
+ E W P+AQ Q GAMFV+P Q+GLF DAF WES+TKN++A+QGFTD +DK E+ME
Sbjct: 570 DRSTEYWQFPTAQGQTGAMFVIPRQIGLFHDAFNRWESITKNYVASQGFTDSKDKAEFME 629
Query: 550 NLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQD 371
NLLGE EKL +QWRMN+ EYQ ++N+ DGR+GT NILSQMRRVFTLEDPT GST +QD
Sbjct: 630 NLLGETEKLTWVQWRMNFPTEYQEMVNAADGREGTQNILSQMRRVFTLEDPTTGSTAVQD 689
Query: 370 IAY*DLERLSCDNIKNILAYINDFMRLAA 284
AY DLERLSC NIK+I++++ND+ RLAA
Sbjct: 690 EAYRDLERLSCTNIKDIVSFLNDYARLAA 718
>gb|ATZ69482.1| ORF3 polyprotein [Cacao swollen shoot Ghana M virus]
Length = 1831
Score = 212 bits (539), Expect = 3e-55
Identities = 137/319 (42%), Positives = 171/319 (53%), Gaps = 10/319 (3%)
Frame = -3
Query: 1210 YSTNPPSDQPI----WDSDTDESPIFDTSEEEINMTESDTHNPXXXXXXXXXXXCITHGC 1043
Y+ P +D I WD D E PI+D S E+ + D +P
Sbjct: 375 YTPPPENDTQIVATGWDDD--EPPIWDKSSEDEDEGNEDDDDPNTYML------------ 420
Query: 1042 SQKHSREKSKEEILLQLANIIXXXXXXXXXXXXXXXXXXXXXAVKK-LAERVYSSAISIA 866
Q E +EI ++A VKK L E V S +
Sbjct: 421 -QLQKEEDEWQEIKEEIA---------------AGWQENLEYPVKKPLTETVLSEVVD-- 462
Query: 865 VSPYRPPADAAM---GNPLSYXXXXXXXXXXXTF--QTDDVPCRTTQFKRGMNNEMWTLP 701
Y PP D M G P + F Q+ VP +FK+ +E W LP
Sbjct: 463 ---YNPPGDTLMTPVGYPPASTTRSQVPDKPPLFEGQSSHVP----RFKKDNYSEWWQLP 515
Query: 700 SAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMENLLGEIEKLI 521
S+Q GA+FVMP+Q+GLF D F WESVTKN++AAQGFTDP +K+E+MENLLGE EKL
Sbjct: 516 SSQGTTGALFVMPKQIGLFHDVFSRWESVTKNYVAAQGFTDPVEKVEFMENLLGETEKLT 575
Query: 520 *IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDIAY*DLERLS 341
IQWRMNY EYQ LI DGR GT NILSQ++RVF+LEDP GST +QD AY DLERL+
Sbjct: 576 WIQWRMNYEAEYQQLITQADGRQGTQNILSQIKRVFSLEDPASGSTRVQDAAYRDLERLT 635
Query: 340 CDNIKNILAYINDFMRLAA 284
C NIK+I+ ++ND+ RLAA
Sbjct: 636 CHNIKDIVQFLNDYGRLAA 654
>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 208 bits (530), Expect = 5e-54
Identities = 108/196 (55%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
Frame = -3
Query: 865 VSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQT--DDVPCRTTQFKRGMNNEMWTLPSAQ 692
+S YRPP D AMG P SY + + +FK + WTLPSAQ
Sbjct: 580 ISQYRPPQDTAMG-PSSYPPAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQ 638
Query: 691 LQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMENLLGEIEKLI*IQ 512
Q GA+FV+P QLGLFD F WES+TKN +AAQGFTDP DK++++ENLLGE EKL IQ
Sbjct: 639 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVDFIENLLGEAEKLTWIQ 698
Query: 511 WRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDIAY*DLERLSCDN 332
WR Y+ EYQ ++NS DGR GT NILSQ+RR+F LEDP+ GST IQD AY DLE+L+C N
Sbjct: 699 WRSTYQAEYQQMMNSADGRAGTENILSQVRRIFALEDPSTGSTKIQDEAYRDLEQLTCSN 758
Query: 331 IKNILAYINDFMRLAA 284
IK+++ ++ND++RLAA
Sbjct: 759 IKDLVPFLNDYLRLAA 774
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 208 bits (530), Expect = 5e-54
Identities = 108/196 (55%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
Frame = -3
Query: 865 VSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQT--DDVPCRTTQFKRGMNNEMWTLPSAQ 692
+S YRPP D AMG P SY + + +FK + WTLPSAQ
Sbjct: 580 ISQYRPPQDTAMG-PSSYPPAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQ 638
Query: 691 LQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMENLLGEIEKLI*IQ 512
Q GA+FV+P QLGLFD F WES+TKN +AAQGFTDP DK++++ENLLGE EKL IQ
Sbjct: 639 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVDFIENLLGEAEKLTWIQ 698
Query: 511 WRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDIAY*DLERLSCDN 332
WR Y+ EYQ ++NS DGR GT NILSQ+RR+F LEDP+ GST IQD AY DLE+L+C N
Sbjct: 699 WRSTYQAEYQQMMNSADGRAGTENILSQVRRIFALEDPSTGSTKIQDEAYRDLEQLTCSN 758
Query: 331 IKNILAYINDFMRLAA 284
IK+++ ++ND++RLAA
Sbjct: 759 IKDLVPFLNDYLRLAA 774
>gb|ASM61279.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 263
Score = 192 bits (488), Expect = 1e-53
Identities = 102/194 (52%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Frame = -3
Query: 898 ERVYSSAISIAVSPYRPPADAAM---GNPLSYXXXXXXXXXXXTFQTDDVPCRTTQFKRG 728
E V+S + Y PP D M G P + + P +FKR
Sbjct: 75 ETVFSETVD-----YTPPGDTMMTPVGYPPASSSRSTVTTPSRPPLFEGRPTHMPRFKRD 129
Query: 727 MNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMEN 548
E W LPS+Q GA+FVMP+Q+GLF D F WES+TKN++AAQGFTDP +KIE+MEN
Sbjct: 130 DYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKIEFMEN 189
Query: 547 LLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDI 368
LLGE EKL IQWRM+Y EYQ LI DGR GT N+LSQ++RVF+LEDP GST +QD
Sbjct: 190 LLGETEKLTWIQWRMSYEAEYQQLITQADGRQGTQNVLSQIKRVFSLEDPASGSTKVQDA 249
Query: 367 AY*DLERLSCDNIK 326
AY DLERL+C NIK
Sbjct: 250 AYRDLERLTCHNIK 263
>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 207 bits (527), Expect = 1e-53
Identities = 107/196 (54%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Frame = -3
Query: 865 VSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQT--DDVPCRTTQFKRGMNNEMWTLPSAQ 692
+S YRPP D AMG P SY + + +FK + WTLPSAQ
Sbjct: 581 ISQYRPPQDTAMG-PSSYPPAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADSWTLPSAQ 639
Query: 691 LQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMENLLGEIEKLI*IQ 512
Q GA+FV+P QLGLFD F WES+TKN +AAQGFTDP DK+ ++ENLLGE EKL IQ
Sbjct: 640 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVGFIENLLGEAEKLTWIQ 699
Query: 511 WRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDIAY*DLERLSCDN 332
WR Y+EEYQ ++NS DGR GT NILSQ+RR+F LEDP GST +QD AY DLE+L+C N
Sbjct: 700 WRSTYQEEYQQMMNSADGRAGTENILSQVRRIFALEDPATGSTKMQDEAYRDLEQLTCSN 759
Query: 331 IKNILAYINDFMRLAA 284
+K+++ ++ND++RLAA
Sbjct: 760 LKDLVPFLNDYLRLAA 775
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 207 bits (526), Expect = 2e-53
Identities = 107/196 (54%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Frame = -3
Query: 865 VSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQT--DDVPCRTTQFKRGMNNEMWTLPSAQ 692
+S YRPP D AMG P SY + + +FK + WTLPSAQ
Sbjct: 581 ISQYRPPQDTAMG-PSSYPPAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQ 639
Query: 691 LQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMENLLGEIEKLI*IQ 512
Q GA+FV+P QLGLFD F WES+TKN +AAQGFTDP DK+ ++ENLLGE EKL IQ
Sbjct: 640 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVGFIENLLGEAEKLTWIQ 699
Query: 511 WRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDIAY*DLERLSCDN 332
WR Y+EEYQ ++NS DGR GT NILSQ+RR+F LEDP GST +QD AY DLE+L+C N
Sbjct: 700 WRSTYQEEYQQMMNSADGRAGTENILSQVRRIFALEDPATGSTKMQDEAYRDLEQLTCSN 759
Query: 331 IKNILAYINDFMRLAA 284
+K+++ ++ND++RLAA
Sbjct: 760 LKDLVPFLNDYLRLAA 775
>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
Length = 1770
Score = 205 bits (522), Expect = 5e-53
Identities = 137/341 (40%), Positives = 169/341 (49%), Gaps = 22/341 (6%)
Frame = -3
Query: 1240 STNPPSDHQPYSTNPPSDQ-------PIWDSDTDES----PIFDTSEEEINMTESDTHNP 1094
+T P SD Q +T SD P WD DE I+D EEE E D ++P
Sbjct: 301 TTPPTSDEQIIATGWGSDDNYDDEIPPKWDESPDEEGSSKTIWDQEEEE----EEDEYDP 356
Query: 1093 XXXXXXXXXXXCITHGCSQKHSREKSKEEILLQLANIIXXXXXXXXXXXXXXXXXXXXXA 914
+ E +EI L +
Sbjct: 357 NIYM-------------AYLQKEEDEWQEIAASLQEEMEMEYPRR--------------- 388
Query: 913 VKKLAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDDVPCRTTQF- 737
+ E V+S + Y PP D M P+ Y T P R F
Sbjct: 389 -RPQTETVFSETVD-----YTPPGDTLM-TPVGYPPASSSR------STVTTPSRPPLFE 435
Query: 736 ----------KRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQG 587
KR E W LPS+Q GA+FVMP+Q+GLF D F WES+TKN++AAQG
Sbjct: 436 GRVTHVPRFLKRDDYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQG 495
Query: 586 FTDPRDKIEYMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTL 407
FTDP +K+E+MENLLGE EKL IQWRMNY EYQ L+ DGR GT NILSQ++RVF+L
Sbjct: 496 FTDPTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRVFSL 555
Query: 406 EDPTQGSTMIQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
EDP GST IQD AY DLERL+C NIK+I+ ++ND+ RLAA
Sbjct: 556 EDPASGSTRIQDAAYRDLERLTCHNIKDIVQFLNDYGRLAA 596
>gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus]
Length = 1881
Score = 205 bits (522), Expect = 5e-53
Identities = 111/208 (53%), Positives = 138/208 (66%), Gaps = 3/208 (1%)
Frame = -3
Query: 898 ERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXT---FQTDDVPCRTTQFKRG 728
ERV+SS V Y PP D M P+ Y +P +T +F+R
Sbjct: 504 ERVFSSE----VVDYTPPGDTLM-TPVGYPPASTSRQPQPVRPPLYEGRIP-QTPKFRRD 557
Query: 727 MNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMEN 548
E W LPS+Q GA+FVMP+Q+GLF + F WES+TKN+IA Q FTDP DK+E++EN
Sbjct: 558 DYTEWWQLPSSQATTGALFVMPKQIGLFHEVFSRWESITKNYIALQEFTDPADKVEFIEN 617
Query: 547 LLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDI 368
LLGE EKL IQWRMNY EYQ LI DGR GT NILSQ++RVF+LEDP GST +QD
Sbjct: 618 LLGETEKLTWIQWRMNYVAEYQQLIAQADGRQGTQNILSQLKRVFSLEDPASGSTRVQDA 677
Query: 367 AY*DLERLSCDNIKNILAYINDFMRLAA 284
AY DLERL+C+NIK+I+ ++ND+ RLAA
Sbjct: 678 AYRDLERLTCNNIKDIVQFLNDYGRLAA 705
>gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]
Length = 1881
Score = 205 bits (521), Expect = 7e-53
Identities = 107/201 (53%), Positives = 134/201 (66%), Gaps = 3/201 (1%)
Frame = -3
Query: 877 ISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQT---DDVPCRTTQFKRGMNNEMWT 707
+S V Y PPAD M P+ Y + + + +FK +E W
Sbjct: 468 LSSEVVDYNPPADTLM-TPVGYPPASIAGPSNRPARPPLFEGYSPQVPKFKAEKYSEWWQ 526
Query: 706 LPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTDPRDKIEYMENLLGEIEK 527
LPS+Q GAMFVMP Q+G+F D F WES+TKN++AAQGFTD +K E++ENLLGE EK
Sbjct: 527 LPSSQGTTGAMFVMPRQIGMFHDVFSRWESITKNYVAAQGFTDTTEKAEFIENLLGETEK 586
Query: 526 LI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDPTQGSTMIQDIAY*DLER 347
L IQWRMNY +EYQ L+ DGR GT NILSQM+RVF+LEDP GST +QD AY DLER
Sbjct: 587 LTWIQWRMNYAQEYQQLLTQSDGRQGTQNILSQMKRVFSLEDPASGSTRVQDDAYRDLER 646
Query: 346 LSCDNIKNILAYINDFMRLAA 284
LSC+NIK+I+ ++ND+ RLAA
Sbjct: 647 LSCNNIKDIIQFLNDYGRLAA 667
>gb|ASG91859.1| polyprotein [Cacao swollen shoot virus]
Length = 1592
Score = 204 bits (520), Expect = 9e-53
Identities = 136/338 (40%), Positives = 167/338 (49%), Gaps = 22/338 (6%)
Frame = -3
Query: 1231 PPSDHQPYSTNPPSDQ-------PIWDSDTDES----PIFDTSEEEINMTESDTHNPXXX 1085
P SD Q +T SD P WD DE PI+D EEE D ++P
Sbjct: 381 PTSDEQIIATGWGSDDDYDDKIPPKWDESPDEEGSSEPIWDQEEEE-----EDEYDPNIY 435
Query: 1084 XXXXXXXXCITHGCSQKHSREKSKEEILLQLANIIXXXXXXXXXXXXXXXXXXXXXAVKK 905
+ E +EI L + +
Sbjct: 436 M-------------AYLQKEEDEWQEIAASLQEEMEMEYPRR----------------RP 466
Query: 904 LAERVYSSAISIAVSPYRPPADAAMGNPLSYXXXXXXXXXXXTFQTDDVPCRTTQF---- 737
E V+S + Y PP D M P+ Y T P R F
Sbjct: 467 QTETVFSETVD-----YTPPGDTMM-TPVGYPPASTSR------STVTTPSRPPLFEGRV 514
Query: 736 -------KRGMNNEMWTLPSAQLQGGAMFVMPEQLGLFDDAFFCWESVTKNHIAAQGFTD 578
KR E W LPS+Q GA+FVMP+Q+GLF D F WES+TKN++AAQGFTD
Sbjct: 515 THVPRFLKRDDYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTD 574
Query: 577 PRDKIEYMENLLGEIEKLI*IQWRMNYREEYQALINSVDGRDGT*NILSQMRRVFTLEDP 398
P +K+E+MENLLGE EKL IQWRMNY EYQ L+ DGR GT NILSQ++RVF+LEDP
Sbjct: 575 PTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRVFSLEDP 634
Query: 397 TQGSTMIQDIAY*DLERLSCDNIKNILAYINDFMRLAA 284
GST IQD AY DLERL+C NIK+I+ ++ND+ RLAA
Sbjct: 635 ASGSTRIQDAAYRDLERLTCHNIKDIVQFLNDYGRLAA 672