BLASTX nr result

ID: Cheilocostus21_contig00020760 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00020760
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009417043.1| PREDICTED: F-box/kelch-repeat protein At2g44...    72   4e-17
ref|XP_009405095.1| PREDICTED: F-box/kelch-repeat protein SKIP20...    56   5e-06

>ref|XP_009417043.1| PREDICTED: F-box/kelch-repeat protein At2g44130-like [Musa
           acuminata subsp. malaccensis]
          Length = 331

 Score = 72.4 bits (176), Expect(2) = 4e-17
 Identities = 35/54 (64%), Positives = 38/54 (70%)
 Frame = +1

Query: 1   VSGGRMWRVGCGGEAGDAREYEGNGRGSREVASLPRGTAPG*ISCAAAAVEGSG 162
           V+GGRMW VGCGG  G  REYEG+GRG +EVA LP G  PG   CAAAAV   G
Sbjct: 222 VAGGRMWSVGCGGGTGGVREYEGSGRGWKEVAPLPVGMRPGPSPCAAAAVALGG 275



 Score = 43.1 bits (100), Expect(2) = 4e-17
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 227 LEVGPRRWTPVDTPMEFTGFVFSA 298
           LEVG RRWT V+TP+ FTGFVFSA
Sbjct: 303 LEVGSRRWTHVETPIGFTGFVFSA 326


>ref|XP_009405095.1| PREDICTED: F-box/kelch-repeat protein SKIP20-like [Musa acuminata
           subsp. malaccensis]
          Length = 386

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
 Frame = +1

Query: 1   VSGGRMWRVGCGGEAGDAREYEGNGRGSREVASLPRGTAPG*ISCAAAAVEGSGDVRVFA 180
           V+ GRMW V CGG     REY G+GRG +EVA LP G     +S   AA  G G+ RVF 
Sbjct: 286 VARGRMWSVECGGGRRGVREYAGSGRGWKEVAPLPEGA----MSRPCAAAMGGGE-RVFL 340

Query: 181 MVGL--GVGRWRPQGVVPGGGS-------TAVDACGYTDGVHGVRI 291
           M     G G    +G +   GS       T V   G+     GVR+
Sbjct: 341 MAATAEGNGSGPHRGWILEAGSANWARVETPVRFSGFAYSAAGVRL 386