BLASTX nr result
ID: Cheilocostus21_contig00020672
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00020672
(410 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009413743.1| PREDICTED: ribosome-binding factor PSRP1, ch... 135 3e-36
ref|XP_020089220.1| ribosome-binding factor PSRP1, chloroplastic... 122 5e-31
gb|OAY74691.1| Ribosome-binding factor PSRP1, chloroplastic [Ana... 122 5e-31
gb|PKA46560.1| Ribosome-binding factor PSRP1, chloroplastic [Apo... 120 2e-30
ref|XP_020592350.1| ribosome-binding factor PSRP1, chloroplastic... 117 3e-29
pdb|5X8R|YY Chain y, Structure Of The 30s Small Subunit Of Chlor... 113 2e-28
ref|XP_010666127.1| PREDICTED: ribosome-binding factor PSRP1, ch... 114 2e-28
ref|XP_021775053.1| ribosome-binding factor PSRP1, chloroplastic... 113 1e-27
ref|XP_021858263.1| ribosome-binding factor PSRP1, chloroplastic... 113 1e-27
sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PS... 113 1e-27
gb|PKU70605.1| Ribosome-binding factor PSRP1, chloroplastic [Den... 112 2e-27
gb|KHN23301.1| 30S ribosomal protein 1, chloroplastic [Glycine s... 110 2e-27
ref|XP_021763081.1| ribosome-binding factor PSRP1, chloroplastic... 112 3e-27
ref|XP_008783579.2| PREDICTED: ribosome-binding factor PSRP1, ch... 113 4e-27
ref|XP_020206896.1| ribosome-binding factor PSRP1, chloroplastic... 111 4e-27
ref|XP_016181343.1| ribosome-binding factor PSRP1, chloroplastic... 111 5e-27
ref|XP_010934070.2| PREDICTED: LOW QUALITY PROTEIN: ribosome-bin... 112 7e-27
gb|PPS19442.1| hypothetical protein GOBAR_AA01134 [Gossypium bar... 111 8e-27
ref|XP_017627003.1| PREDICTED: ribosome-binding factor PSRP1, ch... 111 8e-27
gb|OWM79680.1| hypothetical protein CDL15_Pgr023092 [Punica gran... 108 9e-27
>ref|XP_009413743.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Musa
acuminata subsp. malaccensis]
Length = 297
Score = 135 bits (339), Expect = 3e-36
Identities = 68/83 (81%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
+IVRTKYF+MPPLTVDEAK+QLENVDHSFYAFRNDE+GEINILYKRKEGGYGLIIPK DG
Sbjct: 216 RIVRTKYFDMPPLTVDEAKEQLENVDHSFYAFRNDETGEINILYKRKEGGYGLIIPKDDG 275
Query: 178 QVHNLEISSESAKESTVTEQVSG 246
Q +LE SSE +ES +TE+VSG
Sbjct: 276 QARDLETSSERTRES-ITERVSG 297
>ref|XP_020089220.1| ribosome-binding factor PSRP1, chloroplastic [Ananas comosus]
gb|OAY85982.1| Ribosome-binding factor PSRP1, chloroplastic [Ananas comosus]
Length = 313
Score = 122 bits (305), Expect = 5e-31
Identities = 62/84 (73%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
++VRTKYF+MPPLTV+EA++QLENVDH FYAFRN+E+GEINILYKRK+GGYGLIIPK DG
Sbjct: 232 KVVRTKYFDMPPLTVEEAREQLENVDHDFYAFRNEETGEINILYKRKDGGYGLIIPKDDG 291
Query: 178 QVHNLEISSESAK-ESTVTEQVSG 246
QV +I+ E AK E TV EQ+SG
Sbjct: 292 QVQ--KITEEPAKEEKTVAEQLSG 313
>gb|OAY74691.1| Ribosome-binding factor PSRP1, chloroplastic [Ananas comosus]
Length = 313
Score = 122 bits (305), Expect = 5e-31
Identities = 62/84 (73%), Positives = 74/84 (88%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
++VRTKYF+MPPLTV+EA++QLENVDH FYAFRN+E+GEINILYKRK+GGYGLIIPK DG
Sbjct: 232 KVVRTKYFDMPPLTVEEAREQLENVDHDFYAFRNEETGEINILYKRKDGGYGLIIPKDDG 291
Query: 178 QVHNLEISSESAK-ESTVTEQVSG 246
QV +I+ E AK E TV EQ+SG
Sbjct: 292 QVQ--KITEEPAKEEKTVAEQLSG 313
>gb|PKA46560.1| Ribosome-binding factor PSRP1, chloroplastic [Apostasia
shenzhenica]
Length = 314
Score = 120 bits (301), Expect = 2e-30
Identities = 60/84 (71%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
++VRTKYFEMPPLTV+EAKQQLENVDH FY FRN E+ EINILYKRK+GGYGLIIPK +G
Sbjct: 231 EVVRTKYFEMPPLTVEEAKQQLENVDHDFYGFRNVETSEINILYKRKDGGYGLIIPKEEG 290
Query: 178 QVHNLEISSE-SAKESTVTEQVSG 246
+ H E+ +E +AKE TV EQ+ G
Sbjct: 291 KEHRTEMVAEPAAKEPTVLEQMKG 314
>ref|XP_020592350.1| ribosome-binding factor PSRP1, chloroplastic [Phalaenopsis
equestris]
Length = 318
Score = 117 bits (293), Expect = 3e-29
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKD-G 177
++VRTKYFEMPPLTV+EA QQL+NVDH FY FRNDE+GEINILYKRK+GGYGLIIPKD G
Sbjct: 235 EVVRTKYFEMPPLTVEEAVQQLQNVDHDFYGFRNDETGEINILYKRKDGGYGLIIPKDGG 294
Query: 178 QVHNLE-ISSESAKESTVTEQV 240
+ LE + + S KE +V +Q+
Sbjct: 295 KEQRLESVEAPSVKEPSVLDQI 316
>pdb|5X8R|YY Chain y, Structure Of The 30s Small Subunit Of Chloroplast Ribosome
From Spinach
Length = 236
Score = 113 bits (282), Expect = 2e-28
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
++VRTKYF+MPPLT+ EA +QLENVDH FYAFRN+E+G+INILYKRKEGGYGLIIPKDG+
Sbjct: 158 EVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEGGYGLIIPKDGK 217
Query: 181 VHNLE 195
LE
Sbjct: 218 TEKLE 222
>ref|XP_010666127.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Beta
vulgaris subsp. vulgaris]
gb|KMS96293.1| hypothetical protein BVRB_000070 [Beta vulgaris subsp. vulgaris]
Length = 300
Score = 114 bits (286), Expect = 2e-28
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
+IVRTKYF+MPPLT++EA +QLENVDH FYAFRN+E+GEINILYKRKEGGYGLIIPKDG+
Sbjct: 222 EIVRTKYFDMPPLTLNEAVEQLENVDHDFYAFRNEETGEINILYKRKEGGYGLIIPKDGK 281
Query: 181 VHNLE 195
LE
Sbjct: 282 TEKLE 286
>ref|XP_021775053.1| ribosome-binding factor PSRP1, chloroplastic-like [Chenopodium
quinoa]
Length = 302
Score = 113 bits (282), Expect = 1e-27
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
++VRTKYF+MPPLTV EA +QLENVDH FYAFRN+E+GEINILYKRKEGGYGLI+PKDG+
Sbjct: 224 EVVRTKYFDMPPLTVTEAVEQLENVDHDFYAFRNEETGEINILYKRKEGGYGLIVPKDGK 283
Query: 181 VHNLE 195
L+
Sbjct: 284 TEKLD 288
>ref|XP_021858263.1| ribosome-binding factor PSRP1, chloroplastic [Spinacia oleracea]
gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]
Length = 302
Score = 113 bits (282), Expect = 1e-27
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
++VRTKYF+MPPLT+ EA +QLENVDH FYAFRN+E+G+INILYKRKEGGYGLIIPKDG+
Sbjct: 224 EVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEGGYGLIIPKDGK 283
Query: 181 VHNLE 195
LE
Sbjct: 284 TEKLE 288
>sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;
AltName: Full=30S ribosomal protein 1; AltName:
Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific
30S ribosomal protein 1; Short=PSrp-1; AltName:
Full=Ribosomal protein 1; AltName: Full=S22; AltName:
Full=Translation factor pY; Flags: Precursor
pdb|5MMJ|YY Chain y, Structure Of The Small Subunit Of The Chloroplast Ribosome
pdb|5MMM|YY Chain y, Structure of the 70S chloroplast ribosome
emb|CAA41960.1| chloroplast ribosomal protein S22 (chloroplast) [Spinacia oleracea]
emb|CAA33403.1| spinach S22 r-protein [Spinacia oleracea]
gb|KNA06792.1| hypothetical protein SOVF_177810 [Spinacia oleracea]
Length = 302
Score = 113 bits (282), Expect = 1e-27
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
++VRTKYF+MPPLT+ EA +QLENVDH FYAFRN+E+G+INILYKRKEGGYGLIIPKDG+
Sbjct: 224 EVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDINILYKRKEGGYGLIIPKDGK 283
Query: 181 VHNLE 195
LE
Sbjct: 284 TEKLE 288
>gb|PKU70605.1| Ribosome-binding factor PSRP1, chloroplastic [Dendrobium catenatum]
Length = 313
Score = 112 bits (281), Expect = 2e-27
Identities = 54/80 (67%), Positives = 69/80 (86%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
++VRTKYF+MPPLTV+EA +QL+NVDH FY FRNDE+GEINILYKRK+GGYGLIIPK DG
Sbjct: 234 EVVRTKYFDMPPLTVEEAVKQLQNVDHDFYGFRNDETGEINILYKRKDGGYGLIIPKEDG 293
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ +E + + SAKE++V +
Sbjct: 294 KEQRVEPVDAPSAKEASVLD 313
>gb|KHN23301.1| 30S ribosomal protein 1, chloroplastic [Glycine soja]
Length = 235
Score = 110 bits (276), Expect = 2e-27
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
Q+VRTKYF+MPPLTV EA +QLENVDH FY FRN+E+GEINI+YKRKEGGYGLIIPK DG
Sbjct: 156 QVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDG 215
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ LE + E A ES++ E
Sbjct: 216 EAEKLESVVLEPAIESSLKE 235
>ref|XP_021763081.1| ribosome-binding factor PSRP1, chloroplastic [Chenopodium quinoa]
Length = 302
Score = 112 bits (279), Expect = 3e-27
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
++VRTKYF+MPPLTV EA +QLENVDH FYAFRN+E+G+INILYKRKEGGYGLI+PKDG+
Sbjct: 224 EVVRTKYFDMPPLTVTEAVEQLENVDHDFYAFRNEETGQINILYKRKEGGYGLIVPKDGK 283
Query: 181 VHNLE 195
L+
Sbjct: 284 TEKLD 288
>ref|XP_008783579.2| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Phoenix
dactylifera]
Length = 383
Score = 113 bits (282), Expect = 4e-27
Identities = 54/88 (61%), Positives = 70/88 (79%), Gaps = 6/88 (6%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDGQ 180
++VRTKYF+MPPLTV+EAK+QLENVDH FY FRN+E+GEINILYKR+EGGYGLIIPKD
Sbjct: 296 KVVRTKYFDMPPLTVEEAKEQLENVDHDFYGFRNEETGEINILYKREEGGYGLIIPKDDD 355
Query: 181 VHNLEISSE------SAKESTVTEQVSG 246
+ E+ +A++ +V +Q+SG
Sbjct: 356 DDDDEVQKPDTEAVGAAEDPSVAKQLSG 383
>ref|XP_020206896.1| ribosome-binding factor PSRP1, chloroplastic [Cajanus cajan]
gb|KYP34680.1| hypothetical protein KK1_044350 [Cajanus cajan]
Length = 289
Score = 111 bits (277), Expect = 4e-27
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
++VRTKYF+MPPLTV EA +QLENVDH FY FRN+E+GEINI+YKRKEGGYGLIIPK DG
Sbjct: 210 EVVRTKYFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDG 269
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ LE + E AKE ++ E
Sbjct: 270 EAEKLEPLVVEPAKEPSLKE 289
>ref|XP_016181343.1| ribosome-binding factor PSRP1, chloroplastic [Arachis ipaensis]
Length = 295
Score = 111 bits (277), Expect = 5e-27
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
++VRTKYF+MPPLTV EA +QLENVDH FYAFRN+E+GEINI+YKRKEGGYGLIIPK DG
Sbjct: 216 EVVRTKYFDMPPLTVAEAIEQLENVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGDG 275
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ LE + E A+E ++ E
Sbjct: 276 EAQKLEPLVIEQAREHSLKE 295
>ref|XP_010934070.2| PREDICTED: LOW QUALITY PROTEIN: ribosome-binding factor PSRP1,
chloroplastic [Elaeis guineensis]
Length = 378
Score = 112 bits (280), Expect = 7e-27
Identities = 54/84 (64%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPKDG- 177
++VRTKYF+MPPLTV+EAK+QLENVDH FY FRN+E+GE+NILYKRKEGGYGLIIPK+G
Sbjct: 295 KVVRTKYFDMPPLTVEEAKEQLENVDHDFYGFRNEETGEVNILYKRKEGGYGLIIPKNGD 354
Query: 178 QVHNLEISSESAKES-TVTEQVSG 246
+V + + A E +V +++SG
Sbjct: 355 EVQRPDTEAVGAAEDPSVAKRLSG 378
>gb|PPS19442.1| hypothetical protein GOBAR_AA01134 [Gossypium barbadense]
Length = 323
Score = 111 bits (277), Expect = 8e-27
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
+IVRTKYFEMPPLTV EA +QLENVDH FY FRN+E+GEINILYKRK GGYGLIIPK +G
Sbjct: 244 EIVRTKYFEMPPLTVSEAVEQLENVDHDFYGFRNEETGEINILYKRKAGGYGLIIPKGNG 303
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ LE + ESAKE + E
Sbjct: 304 KAEKLEPLVVESAKEHSYVE 323
>ref|XP_017627003.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Gossypium
arboreum]
gb|KHG05123.1| 30S ribosomal 1, chloroplastic [Gossypium arboreum]
Length = 323
Score = 111 bits (277), Expect = 8e-27
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
+IVRTKYFEMPPLTV EA +QLENVDH FY FRN+E+GEINILYKRK GGYGLIIPK +G
Sbjct: 244 EIVRTKYFEMPPLTVSEAVEQLENVDHDFYGFRNEETGEINILYKRKAGGYGLIIPKGNG 303
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ LE + ESAKE + E
Sbjct: 304 KAEKLEPLVVESAKEHSYVE 323
>gb|OWM79680.1| hypothetical protein CDL15_Pgr023092 [Punica granatum]
Length = 213
Score = 108 bits (270), Expect = 9e-27
Identities = 53/80 (66%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 QIVRTKYFEMPPLTVDEAKQQLENVDHSFYAFRNDESGEINILYKRKEGGYGLIIPK-DG 177
+IVRTKYF+MPPLTV EA +QLEN+DH+FYAFRN+E+GEINILY+RK GGYGLIIPK +G
Sbjct: 133 EIVRTKYFDMPPLTVSEAIEQLENIDHAFYAFRNEETGEINILYRRKAGGYGLIIPKGNG 192
Query: 178 QVHNLE-ISSESAKESTVTE 234
+ +E ++ E AKE + E
Sbjct: 193 RAQKVEPVAVEPAKEPSFAE 212