BLASTX nr result

ID: Cheilocostus21_contig00019883 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00019883
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009418194.1| PREDICTED: scarecrow-like protein 6 [Musa ac...    65   2e-09
ref|XP_009407846.1| PREDICTED: scarecrow-like protein 6 [Musa ac...    60   1e-07

>ref|XP_009418194.1| PREDICTED: scarecrow-like protein 6 [Musa acuminata subsp.
           malaccensis]
          Length = 726

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 30/35 (85%), Positives = 30/35 (85%)
 Frame = +2

Query: 269 MRRGMPFAVQEKGAPLQVLEGEEGLLWCASAATVA 373
           MR GMPFAVQEKGAPLQVLEGEEGL WCASA   A
Sbjct: 1   MRGGMPFAVQEKGAPLQVLEGEEGLFWCASATAAA 35


>ref|XP_009407846.1| PREDICTED: scarecrow-like protein 6 [Musa acuminata subsp.
           malaccensis]
          Length = 718

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
 Frame = +2

Query: 269 MRRGMPFAVQEKGAPLQVLEGEEGLLWCASAATVAAEIGGA--REKER 406
           M  GMP ++QEKGAPLQVLEGEEGL WCAS++  AA+   +  R KER
Sbjct: 1   MGGGMPLSLQEKGAPLQVLEGEEGLFWCASSSATAADNSNSNTRWKER 48


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