BLASTX nr result
ID: Cheilocostus21_contig00019711
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00019711
(1031 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009392829.1| PREDICTED: RNA polymerase II transcription f... 458 e-157
ref|XP_020113269.1| RNA polymerase II transcription factor B sub... 440 e-151
ref|XP_020113268.1| RNA polymerase II transcription factor B sub... 440 e-150
ref|XP_020113267.1| RNA polymerase II transcription factor B sub... 440 e-150
ref|XP_008778436.1| PREDICTED: RNA polymerase II transcription f... 435 e-149
ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription f... 435 e-148
ref|XP_010940421.1| PREDICTED: RNA polymerase II transcription f... 431 e-148
ref|XP_010940418.1| PREDICTED: RNA polymerase II transcription f... 431 e-148
ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription f... 431 e-147
gb|OAY83764.1| General transcription factor IIH subunit 4 [Anana... 426 e-145
ref|XP_006653885.1| PREDICTED: RNA polymerase II transcription f... 426 e-145
ref|XP_012091582.1| RNA polymerase II transcription factor B sub... 425 e-144
gb|EEE61913.1| hypothetical protein OsJ_16644 [Oryza sativa Japo... 423 e-144
ref|XP_015633748.1| PREDICTED: general transcription factor IIH ... 423 e-143
ref|XP_015888991.1| PREDICTED: RNA polymerase II transcription f... 421 e-143
ref|XP_023877525.1| general transcription and DNA repair factor ... 420 e-142
ref|XP_020247553.1| RNA polymerase II transcription factor B sub... 420 e-142
ref|XP_021599929.1| RNA polymerase II transcription factor B sub... 418 e-142
ref|XP_020686246.1| RNA polymerase II transcription factor B sub... 416 e-141
ref|XP_020581220.1| RNA polymerase II transcription factor B sub... 416 e-141
>ref|XP_009392829.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X4 [Musa acuminata subsp. malaccensis]
Length = 451
Score = 458 bits (1178), Expect = e-157
Identities = 227/251 (90%), Positives = 244/251 (97%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYISTAEDRGVDP+DLISFLLELSFHTLGEAYNLNTLTDVQR AIKD
Sbjct: 198 LMDTNAQLWYIIREYISTAEDRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQRIAIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSS+KEGFVVVETNFRMYAYSTSKLYC
Sbjct: 258 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSNKEGFVVVETNFRMYAYSTSKLYC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNL+VGAITKESLYNAFENGITA+QI+ FLQQNAHPRVAQKIP VPE
Sbjct: 318 EILRLFSRIEYQLPNLLVGAITKESLYNAFENGITADQIICFLQQNAHPRVAQKIPAVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETD+NRVEITP+ LYE+FPSKEVFEAA D+AR+LG LL+EDS+ MRL+VR+
Sbjct: 378 NVTDQIRLWETDKNRVEITPSYLYEDFPSKEVFEAACDFARELGGLLFEDSRTMRLVVRV 437
Query: 721 EVYQEMRDYLR 753
EV+QEMRD+LR
Sbjct: 438 EVHQEMRDFLR 448
>ref|XP_020113269.1| RNA polymerase II transcription factor B subunit 2 isoform X3
[Ananas comosus]
Length = 379
Score = 440 bits (1131), Expect = e-151
Identities = 220/251 (87%), Positives = 237/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIST+EDRGVDP+DLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD
Sbjct: 125 LMDTNAQLWYIIREYISTSEDRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 184
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S TDSSS KEGFVVVETNFRMYAYSTS+L+
Sbjct: 185 LADLGLVKLQQGRKESWFIPTKLATNLSVSLTDSSSRKEGFVVVETNFRMYAYSTSRLHS 244
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVA+KIPTVPE
Sbjct: 245 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAEKIPTVPE 304
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+AR+ LL+EDSK MRLIVR
Sbjct: 305 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKDLFEACCDFAREYNCLLWEDSKKMRLIVRG 364
Query: 721 EVYQEMRDYLR 753
E +Q+MRD+LR
Sbjct: 365 EFHQQMRDFLR 375
>ref|XP_020113268.1| RNA polymerase II transcription factor B subunit 2 isoform X2
[Ananas comosus]
Length = 429
Score = 440 bits (1131), Expect = e-150
Identities = 220/251 (87%), Positives = 237/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIST+EDRGVDP+DLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD
Sbjct: 175 LMDTNAQLWYIIREYISTSEDRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 234
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S TDSSS KEGFVVVETNFRMYAYSTS+L+
Sbjct: 235 LADLGLVKLQQGRKESWFIPTKLATNLSVSLTDSSSRKEGFVVVETNFRMYAYSTSRLHS 294
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVA+KIPTVPE
Sbjct: 295 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAEKIPTVPE 354
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+AR+ LL+EDSK MRLIVR
Sbjct: 355 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKDLFEACCDFAREYNCLLWEDSKKMRLIVRG 414
Query: 721 EVYQEMRDYLR 753
E +Q+MRD+LR
Sbjct: 415 EFHQQMRDFLR 425
>ref|XP_020113267.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Ananas comosus]
Length = 452
Score = 440 bits (1131), Expect = e-150
Identities = 220/251 (87%), Positives = 237/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIST+EDRGVDP+DLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD
Sbjct: 198 LMDTNAQLWYIIREYISTSEDRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S TDSSS KEGFVVVETNFRMYAYSTS+L+
Sbjct: 258 LADLGLVKLQQGRKESWFIPTKLATNLSVSLTDSSSRKEGFVVVETNFRMYAYSTSRLHS 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVA+KIPTVPE
Sbjct: 318 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAEKIPTVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+AR+ LL+EDSK MRLIVR
Sbjct: 378 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKDLFEACCDFAREYNCLLWEDSKKMRLIVRG 437
Query: 721 EVYQEMRDYLR 753
E +Q+MRD+LR
Sbjct: 438 EFHQQMRDFLR 448
>ref|XP_008778436.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Phoenix dactylifera]
Length = 401
Score = 435 bits (1119), Expect = e-149
Identities = 214/251 (85%), Positives = 235/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS++EDRGVDP+DLISFLLELSFHTLGEAYNLNTLTDVQ++AIKD
Sbjct: 148 LMDTNAQLWYIIREYISSSEDRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQKHAIKD 207
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGL+KLQQGRKESWFIPTKLATNLS S +DSSS KEGFVVVETNFRMYAYS+SKL+C
Sbjct: 208 LADLGLIKLQQGRKESWFIPTKLATNLSVSLSDSSSRKEGFVVVETNFRMYAYSSSKLHC 267
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQN HPRVA K P +PE
Sbjct: 268 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNVHPRVATKTPVIPE 327
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVEI P+ LYE+FPSKE+FEA D+AR++G LL+EDSK MRLIVR
Sbjct: 328 NVTDQIRLWETDRNRVEIIPSHLYEDFPSKEIFEAVCDFAREIGGLLWEDSKKMRLIVRG 387
Query: 721 EVYQEMRDYLR 753
E +Q MRD+LR
Sbjct: 388 EYHQHMRDFLR 398
>ref|XP_008778431.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Phoenix dactylifera]
Length = 451
Score = 435 bits (1119), Expect = e-148
Identities = 214/251 (85%), Positives = 235/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS++EDRGVDP+DLISFLLELSFHTLGEAYNLNTLTDVQ++AIKD
Sbjct: 198 LMDTNAQLWYIIREYISSSEDRGVDPTDLISFLLELSFHTLGEAYNLNTLTDVQKHAIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGL+KLQQGRKESWFIPTKLATNLS S +DSSS KEGFVVVETNFRMYAYS+SKL+C
Sbjct: 258 LADLGLIKLQQGRKESWFIPTKLATNLSVSLSDSSSRKEGFVVVETNFRMYAYSSSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQN HPRVA K P +PE
Sbjct: 318 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNVHPRVATKTPVIPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVEI P+ LYE+FPSKE+FEA D+AR++G LL+EDSK MRLIVR
Sbjct: 378 NVTDQIRLWETDRNRVEIIPSHLYEDFPSKEIFEAVCDFAREIGGLLWEDSKKMRLIVRG 437
Query: 721 EVYQEMRDYLR 753
E +Q MRD+LR
Sbjct: 438 EYHQHMRDFLR 448
>ref|XP_010940421.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Elaeis guineensis]
Length = 390
Score = 431 bits (1109), Expect = e-148
Identities = 212/251 (84%), Positives = 234/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS++EDRGVDP+DLI FLLELSFHTLGEAYNLNTLTDVQ++AIKD
Sbjct: 137 LMDTNAQLWYIIREYISSSEDRGVDPTDLICFLLELSFHTLGEAYNLNTLTDVQKHAIKD 196
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S +DSSS KEGFVVVETNFRMYAYS+SKL+C
Sbjct: 197 LADLGLVKLQQGRKESWFIPTKLATNLSVSLSDSSSRKEGFVVVETNFRMYAYSSSKLHC 256
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQN HPRVA K P VPE
Sbjct: 257 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNVHPRVATKTPAVPE 316
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+AR++G LL+EDSK MRL+VR
Sbjct: 317 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRG 376
Query: 721 EVYQEMRDYLR 753
E +Q MRD+LR
Sbjct: 377 EYHQHMRDFLR 387
>ref|XP_010940418.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Elaeis guineensis]
ref|XP_010940419.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Elaeis guineensis]
Length = 403
Score = 431 bits (1109), Expect = e-148
Identities = 212/251 (84%), Positives = 234/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS++EDRGVDP+DLI FLLELSFHTLGEAYNLNTLTDVQ++AIKD
Sbjct: 150 LMDTNAQLWYIIREYISSSEDRGVDPTDLICFLLELSFHTLGEAYNLNTLTDVQKHAIKD 209
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S +DSSS KEGFVVVETNFRMYAYS+SKL+C
Sbjct: 210 LADLGLVKLQQGRKESWFIPTKLATNLSVSLSDSSSRKEGFVVVETNFRMYAYSSSKLHC 269
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQN HPRVA K P VPE
Sbjct: 270 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNVHPRVATKTPAVPE 329
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+AR++G LL+EDSK MRL+VR
Sbjct: 330 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRG 389
Query: 721 EVYQEMRDYLR 753
E +Q MRD+LR
Sbjct: 390 EYHQHMRDFLR 400
>ref|XP_010940415.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
ref|XP_010940416.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Elaeis guineensis]
Length = 451
Score = 431 bits (1109), Expect = e-147
Identities = 212/251 (84%), Positives = 234/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS++EDRGVDP+DLI FLLELSFHTLGEAYNLNTLTDVQ++AIKD
Sbjct: 198 LMDTNAQLWYIIREYISSSEDRGVDPTDLICFLLELSFHTLGEAYNLNTLTDVQKHAIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S +DSSS KEGFVVVETNFRMYAYS+SKL+C
Sbjct: 258 LADLGLVKLQQGRKESWFIPTKLATNLSVSLSDSSSRKEGFVVVETNFRMYAYSSSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQN HPRVA K P VPE
Sbjct: 318 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNVHPRVATKTPAVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+AR++G LL+EDSK MRL+VR
Sbjct: 378 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRG 437
Query: 721 EVYQEMRDYLR 753
E +Q MRD+LR
Sbjct: 438 EYHQHMRDFLR 448
>gb|OAY83764.1| General transcription factor IIH subunit 4 [Ananas comosus]
Length = 418
Score = 426 bits (1095), Expect = e-145
Identities = 219/272 (80%), Positives = 236/272 (86%), Gaps = 21/272 (7%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGE----------------- 129
LMDT+AQLWYIIREYIST+EDRGVDP+DLISFLLELSFHTLGE
Sbjct: 143 LMDTNAQLWYIIREYISTSEDRGVDPTDLISFLLELSFHTLGELLLVAVLCCANCKFFMF 202
Query: 130 ----AYNLNTLTDVQRNAIKDLADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKE 297
YNLNTLTDVQRNAIKDLADLGLVKLQQGRKESWFIPTKLATNLS S TDSSS KE
Sbjct: 203 LAIITYNLNTLTDVQRNAIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSLTDSSSRKE 262
Query: 298 GFVVVETNFRMYAYSTSKLYCEILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI 477
GFVVVETNFRMYAYSTS+L+ EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI
Sbjct: 263 GFVVVETNFRMYAYSTSRLHSEILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQI 322
Query: 478 VSFLQQNAHPRVAQKIPTVPENVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDY 657
VSFLQQNAHPRVA+KIPTVPENVTDQIRLWETDRNRVE+ P+ LYE+FPSK++FEA D+
Sbjct: 323 VSFLQQNAHPRVAEKIPTVPENVTDQIRLWETDRNRVEMIPSHLYEDFPSKDLFEACCDF 382
Query: 658 ARDLGALLYEDSKNMRLIVRLEVYQEMRDYLR 753
AR+ LL+EDSK MRLIVR E +Q+MRD+LR
Sbjct: 383 AREYNCLLWEDSKKMRLIVRGEFHQQMRDFLR 414
>ref|XP_006653885.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Oryza brachyantha]
Length = 451
Score = 426 bits (1095), Expect = e-145
Identities = 209/251 (83%), Positives = 237/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LM+T+AQLWYI+REYIS++E+RGVDP++LISFLLELSFHTLGEAY+LNTLTDVQRNAI+D
Sbjct: 198 LMETNAQLWYIMREYISSSEERGVDPTELISFLLELSFHTLGEAYSLNTLTDVQRNAIRD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LA+LGLVKLQQGRK+SWFIPTKLATNLSAS +DSSSSKEGFVVVETNFRMYAYSTSKL+C
Sbjct: 258 LAELGLVKLQQGRKDSWFIPTKLATNLSASLSDSSSSKEGFVVVETNFRMYAYSTSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSR+EYQLPNLIVG+ITKESLY AFENGITAEQI+SFLQQNAHPRVA KIP VPE
Sbjct: 318 EILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRVADKIPAVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+T + LYE+FPSK++FE DYARD G LL+ED+K MRLIVR+
Sbjct: 378 NVTDQIRLWETDRNRVEMTLSHLYEDFPSKDMFEQCCDYARDHGCLLWEDAKKMRLIVRV 437
Query: 721 EVYQEMRDYLR 753
E + EMR++LR
Sbjct: 438 EFHPEMREFLR 448
>ref|XP_012091582.1| RNA polymerase II transcription factor B subunit 2 [Jatropha
curcas]
gb|KDP20952.1| hypothetical protein JCGZ_21423 [Jatropha curcas]
Length = 450
Score = 425 bits (1093), Expect = e-144
Identities = 206/252 (81%), Positives = 232/252 (92%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS +E+RG+DP DLISFLLELSFHT GEAYN+NTLTD+QRN IKD
Sbjct: 197 LMDTNAQLWYIIREYISNSEERGIDPPDLISFLLELSFHTPGEAYNMNTLTDIQRNTIKD 256
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGL+KLQQGRKESWFIPTKLATNLS S TDSSS K+GFVVVETNFRMYAYS SKL+C
Sbjct: 257 LADLGLIKLQQGRKESWFIPTKLATNLSVSLTDSSSRKQGFVVVETNFRMYAYSQSKLHC 316
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSR+EYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQNAHPRVA+KIPTVPE
Sbjct: 317 EILRLFSRVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVAEKIPTVPE 376
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWE+D NRVE+TPA Y+EFPS++VFEAA D+AR+ LL+EDSK MR+ V+
Sbjct: 377 NVTDQIRLWESDLNRVEMTPAHFYDEFPSRDVFEAACDFAREWSGLLWEDSKKMRMAVKA 436
Query: 721 EVYQEMRDYLRG 756
E++ MR++LRG
Sbjct: 437 ELHMNMREFLRG 448
>gb|EEE61913.1| hypothetical protein OsJ_16644 [Oryza sativa Japonica Group]
Length = 427
Score = 423 bits (1087), Expect = e-144
Identities = 206/251 (82%), Positives = 237/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LM+T+AQLWYI+REYIS+AE+RGVDP++LISFLLELSFHTLGEAY+LNTLTDVQRNAI+D
Sbjct: 174 LMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHTLGEAYSLNTLTDVQRNAIRD 233
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LA+LGLVKLQQGRK+SWFIPTKLATNLSAS +DSSS+KEGFVVVETNFRMYAYSTS+L+C
Sbjct: 234 LAELGLVKLQQGRKDSWFIPTKLATNLSASLSDSSSNKEGFVVVETNFRMYAYSTSRLHC 293
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSR+EYQLPNLIVG+ITKESLY AFENGITAEQI+SFLQQNAHPRVA KIP VPE
Sbjct: 294 EILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRVADKIPAVPE 353
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRV++T + LYE+FPSK++F+ DYARD G LL+ED+K MRLIVR+
Sbjct: 354 NVTDQIRLWETDRNRVDMTLSHLYEDFPSKDMFDQCCDYARDHGCLLWEDAKKMRLIVRV 413
Query: 721 EVYQEMRDYLR 753
E + EMR++LR
Sbjct: 414 EFHSEMREFLR 424
>ref|XP_015633748.1| PREDICTED: general transcription factor IIH subunit 4 [Oryza sativa
Japonica Group]
emb|CAE05735.1| OSJNBb0017I01.15 [Oryza sativa Japonica Group]
dbj|BAS91663.1| Os04g0680000 [Oryza sativa Japonica Group]
Length = 451
Score = 423 bits (1087), Expect = e-143
Identities = 206/251 (82%), Positives = 237/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LM+T+AQLWYI+REYIS+AE+RGVDP++LISFLLELSFHTLGEAY+LNTLTDVQRNAI+D
Sbjct: 198 LMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHTLGEAYSLNTLTDVQRNAIRD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LA+LGLVKLQQGRK+SWFIPTKLATNLSAS +DSSS+KEGFVVVETNFRMYAYSTS+L+C
Sbjct: 258 LAELGLVKLQQGRKDSWFIPTKLATNLSASLSDSSSNKEGFVVVETNFRMYAYSTSRLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSR+EYQLPNLIVG+ITKESLY AFENGITAEQI+SFLQQNAHPRVA KIP VPE
Sbjct: 318 EILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRVADKIPAVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRV++T + LYE+FPSK++F+ DYARD G LL+ED+K MRLIVR+
Sbjct: 378 NVTDQIRLWETDRNRVDMTLSHLYEDFPSKDMFDQCCDYARDHGCLLWEDAKKMRLIVRV 437
Query: 721 EVYQEMRDYLR 753
E + EMR++LR
Sbjct: 438 EFHSEMREFLR 448
>ref|XP_015888991.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
[Ziziphus jujuba]
Length = 451
Score = 421 bits (1081), Expect = e-143
Identities = 205/252 (81%), Positives = 230/252 (91%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS +E+RGVDP+DLISFLLELSFH GEAYN+NTLTDVQ N IKD
Sbjct: 198 LMDTNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYNMNTLTDVQSNTIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
L+DLGLVKLQQGRKESWFIPTKLATNLS S DSSS K+GFVVVETNFRMYAYSTSKL+C
Sbjct: 258 LSDLGLVKLQQGRKESWFIPTKLATNLSVSLADSSSRKQGFVVVETNFRMYAYSTSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLY AFENGITAEQI+SF+QQNAHPRVA++IP+VPE
Sbjct: 318 EILRLFSRIEYQLPNLIVGAITKESLYTAFENGITAEQIISFIQQNAHPRVAERIPSVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWE+D NR+E+TPA Y+EFPSKEVFEAA D+AR+ LL+EDSK RL+V+
Sbjct: 378 NVTDQIRLWESDLNRIEMTPAHHYDEFPSKEVFEAACDFAREWNGLLWEDSKKKRLVVKA 437
Query: 721 EVYQEMRDYLRG 756
E++ MRD+LRG
Sbjct: 438 EIHMHMRDFLRG 449
>ref|XP_023877525.1| general transcription and DNA repair factor IIH subunit TFB2
[Quercus suber]
gb|POF23264.1| rna polymerase ii transcription factor b subunit 2 [Quercus suber]
Length = 451
Score = 420 bits (1080), Expect = e-142
Identities = 204/252 (80%), Positives = 231/252 (91%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS +E+RGVDP+DLISFLLELSFH GEAYN NTLT+VQRN IKD
Sbjct: 198 LMDTNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYNSNTLTEVQRNTIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
L DLGLVKLQQGRKESWFIPTKLATNLS S TDS+S K+GFVVVETNFR+YAYSTSKL+C
Sbjct: 258 LTDLGLVKLQQGRKESWFIPTKLATNLSVSLTDSTSRKQGFVVVETNFRLYAYSTSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSR+EYQLPNLIVGAITKESLYNAFENGI A+QI+SFLQQNAHPRVA++IPTVPE
Sbjct: 318 EILRLFSRVEYQLPNLIVGAITKESLYNAFENGIAADQIISFLQQNAHPRVAERIPTVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWE+D NRVE+TPA Y+EFPS+E+FEAA D+AR+ LL+EDSK MRL+V+
Sbjct: 378 NVTDQIRLWESDLNRVEMTPAHYYDEFPSREIFEAACDHAREWNGLLWEDSKRMRLVVKA 437
Query: 721 EVYQEMRDYLRG 756
E++ MRD+LRG
Sbjct: 438 EIHIHMRDHLRG 449
>ref|XP_020247553.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
ref|XP_020247554.1| RNA polymerase II transcription factor B subunit 2 isoform X1
[Asparagus officinalis]
Length = 451
Score = 420 bits (1080), Expect = e-142
Identities = 203/251 (80%), Positives = 236/251 (94%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYI+REYIS++EDRGVDP++LISFLLELSFHT+G+AYNL+TLTDVQRNAIKD
Sbjct: 198 LMDTNAQLWYIVREYISSSEDRGVDPTELISFLLELSFHTMGKAYNLSTLTDVQRNAIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LA LGLVKLQQGRKESWFIPTKLATNLS S +D+S+ K+G+VVVETNFRMYAYSTSKL+C
Sbjct: 258 LASLGLVKLQQGRKESWFIPTKLATNLSVSLSDTSARKQGYVVVETNFRMYAYSTSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVG+ITKESLYNAFENGIT++QI+SFLQQNAHPRVA+K P +PE
Sbjct: 318 EILRLFSRIEYQLPNLIVGSITKESLYNAFENGITSDQIISFLQQNAHPRVAEKTPAIPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWE DRNRV++ P+ LYE+FPSK+VFEAA D+AR+LG LL+EDSK MRLIV
Sbjct: 378 NVTDQIRLWEGDRNRVDLIPSHLYEDFPSKDVFEAACDFARELGGLLWEDSKKMRLIVDG 437
Query: 721 EVYQEMRDYLR 753
+++Q MRD+LR
Sbjct: 438 DLHQHMRDFLR 448
>ref|XP_021599929.1| RNA polymerase II transcription factor B subunit 2 [Manihot
esculenta]
gb|OAY24793.1| hypothetical protein MANES_17G044000 [Manihot esculenta]
Length = 451
Score = 418 bits (1075), Expect = e-142
Identities = 201/252 (79%), Positives = 233/252 (92%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYIS +E+R +D +DLISFLLELSFH GEAYN+NTLT+++R+ IKD
Sbjct: 198 LMDTNAQLWYIIREYISNSEERDIDSADLISFLLELSFHITGEAYNMNTLTEIERHMIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLGLVKLQQGRKESWFIPTKLATNLS S TDSSS K+GFVVVETNFRMYAYSTSKL+C
Sbjct: 258 LADLGLVKLQQGRKESWFIPTKLATNLSVSLTDSSSRKQGFVVVETNFRMYAYSTSKLHC 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSR+EYQLPNLIVGAITKESLYNAFENGITAEQI+SFLQQNAHPRVA++IPTVPE
Sbjct: 318 EILRLFSRVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVAERIPTVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWE+D NRVE+TPA Y+EFPS++VFEAA D+AR+ LL+EDSK MR++V+
Sbjct: 378 NVTDQIRLWESDLNRVEMTPAHFYDEFPSRDVFEAACDFAREWSGLLWEDSKKMRMVVKA 437
Query: 721 EVYQEMRDYLRG 756
E++ +MR++LRG
Sbjct: 438 EIHMQMREFLRG 449
>ref|XP_020686246.1| RNA polymerase II transcription factor B subunit 2 [Dendrobium
catenatum]
gb|PKU79818.1| hypothetical protein MA16_Dca024391 [Dendrobium catenatum]
Length = 451
Score = 416 bits (1070), Expect = e-141
Identities = 201/251 (80%), Positives = 235/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYI+T+EDRG++P+DLISFLLELSFH+LGEAYN+N+LTDVQ AIKD
Sbjct: 198 LMDTNAQLWYIIREYITTSEDRGIEPTDLISFLLELSFHSLGEAYNMNSLTDVQCKAIKD 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLG+VKLQQGRKESWFIPTKLA+NLS S +DSSS ++GFVVVETNFRMYAYSTSKL+
Sbjct: 258 LADLGVVKLQQGRKESWFIPTKLASNLSISLSDSSSRRQGFVVVETNFRMYAYSTSKLHS 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIV AITKESLY AFENGITA+QI+SFLQQNAHPR+ +++PTVPE
Sbjct: 318 EILRLFSRIEYQLPNLIVAAITKESLYTAFENGITADQIISFLQQNAHPRIVERVPTVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ +YE+FPSKEVFE A+D+AR++G LL+EDS MRLIVR
Sbjct: 378 NVTDQIRLWETDRNRVEMIPSHIYEDFPSKEVFEGAADFAREVGGLLWEDSNKMRLIVRG 437
Query: 721 EVYQEMRDYLR 753
E++Q+MRD+LR
Sbjct: 438 ELHQQMRDFLR 448
>ref|XP_020581220.1| RNA polymerase II transcription factor B subunit 2-like isoform X2
[Phalaenopsis equestris]
Length = 451
Score = 416 bits (1070), Expect = e-141
Identities = 200/251 (79%), Positives = 235/251 (93%)
Frame = +1
Query: 1 LMDTSAQLWYIIREYISTAEDRGVDPSDLISFLLELSFHTLGEAYNLNTLTDVQRNAIKD 180
LMDT+AQLWYIIREYI+T+E+RGVDP+DLISFLLELSFH+LGEAYN+N+LT++Q +K+
Sbjct: 198 LMDTNAQLWYIIREYITTSEERGVDPTDLISFLLELSFHSLGEAYNMNSLTELQSRTVKE 257
Query: 181 LADLGLVKLQQGRKESWFIPTKLATNLSASFTDSSSSKEGFVVVETNFRMYAYSTSKLYC 360
LADLG+VKLQQGRKESWFIPTKLATNLS S +DSSS KEGF+VVETNFR+YAYSTSKL+
Sbjct: 258 LADLGVVKLQQGRKESWFIPTKLATNLSISLSDSSSRKEGFMVVETNFRLYAYSTSKLHS 317
Query: 361 EILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIVSFLQQNAHPRVAQKIPTVPE 540
EILRLFSRIEYQLPNLIVGAITKESLY AFENGITA+QI+SFLQQNAHPR+A+++PTVPE
Sbjct: 318 EILRLFSRIEYQLPNLIVGAITKESLYTAFENGITADQIISFLQQNAHPRIAERVPTVPE 377
Query: 541 NVTDQIRLWETDRNRVEITPASLYEEFPSKEVFEAASDYARDLGALLYEDSKNMRLIVRL 720
NVTDQIRLWETDRNRVE+ P+ LYE+FPSKE+FE A+D+AR+ G L+EDSK MRLIVR
Sbjct: 378 NVTDQIRLWETDRNRVEMIPSHLYEDFPSKELFEGAADFAREFGGFLWEDSKKMRLIVRG 437
Query: 721 EVYQEMRDYLR 753
E++Q+MRD+LR
Sbjct: 438 ELHQQMRDFLR 448