BLASTX nr result
ID: Cheilocostus21_contig00019682
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00019682 (635 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009405492.1| PREDICTED: SWI/SNF complex component SNF12 h... 81 4e-14 ref|XP_009415926.1| PREDICTED: SWI/SNF complex component SNF12 h... 78 5e-13 ref|XP_010929776.1| PREDICTED: SWI/SNF complex component SNF12 h... 57 4e-06 ref|XP_008788860.1| PREDICTED: SWI/SNF complex component SNF12 h... 57 8e-06 >ref|XP_009405492.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Musa acuminata subsp. malaccensis] ref|XP_009405493.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Musa acuminata subsp. malaccensis] Length = 517 Score = 80.9 bits (198), Expect = 4e-14 Identities = 46/79 (58%), Positives = 48/79 (60%) Frame = -3 Query: 351 MASNSNNQPRAVGGLPSLISPGMVSPASAXXXXXXXXXXXXXXXXXXXXXXSQTQSQGQP 172 MASNSNNQPRAVGG PSL + GM PASA SQTQSQ QP Sbjct: 1 MASNSNNQPRAVGGSPSLANSGMGLPASANPPSHLRPPPAPGPSPFQGLFHSQTQSQAQP 60 Query: 171 QVHSPFQIQMGAQSQLGHL 115 QVHSPFQI MG+QS LG L Sbjct: 61 QVHSPFQIHMGSQSHLGPL 79 >ref|XP_009415926.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1 [Musa acuminata subsp. malaccensis] ref|XP_009415927.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1 [Musa acuminata subsp. malaccensis] Length = 519 Score = 77.8 bits (190), Expect = 5e-13 Identities = 43/79 (54%), Positives = 47/79 (59%) Frame = -3 Query: 351 MASNSNNQPRAVGGLPSLISPGMVSPASAXXXXXXXXXXXXXXXXXXXXXXSQTQSQGQP 172 MASN+NNQPR VGG P L +PGM SPASA SQ Q QP Sbjct: 1 MASNNNNQPRGVGGPPPLGNPGMASPASANQPPHLRPPPPPGSSPFQGLFHSQAHPQAQP 60 Query: 171 QVHSPFQIQMGAQSQLGHL 115 QVHSPFQIQMG+QSQ+G L Sbjct: 61 QVHSPFQIQMGSQSQVGLL 79 >ref|XP_010929776.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Elaeis guineensis] Length = 521 Score = 57.4 bits (137), Expect = 4e-06 Identities = 33/75 (44%), Positives = 40/75 (53%) Frame = -3 Query: 351 MASNSNNQPRAVGGLPSLISPGMVSPASAXXXXXXXXXXXXXXXXXXXXXXSQTQSQGQP 172 MASNSNNQ RA+GG P L +PGM SPA+ QT Q Sbjct: 1 MASNSNNQSRAIGGPPPLGNPGMASPAANQPSHLRPPSLPQASGGSPFQGLFQTPPQS-- 58 Query: 171 QVHSPFQIQMGAQSQ 127 QVHSPFQ+Q+ +Q+Q Sbjct: 59 QVHSPFQVQLSSQTQ 73 >ref|XP_008788860.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Phoenix dactylifera] ref|XP_008788861.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Phoenix dactylifera] Length = 521 Score = 56.6 bits (135), Expect = 8e-06 Identities = 33/75 (44%), Positives = 40/75 (53%) Frame = -3 Query: 351 MASNSNNQPRAVGGLPSLISPGMVSPASAXXXXXXXXXXXXXXXXXXXXXXSQTQSQGQP 172 MASNSNNQ RA+GG L +PGM SPA+ QT Q Sbjct: 1 MASNSNNQSRAIGGPSPLGNPGMASPATNQPSHLRPPSLPQASGGSPFQGLFQTPPQS-- 58 Query: 171 QVHSPFQIQMGAQSQ 127 QVHSPFQ+Q+G+Q+Q Sbjct: 59 QVHSPFQVQLGSQAQ 73