BLASTX nr result

ID: Cheilocostus21_contig00019640 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00019640
         (738 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009399573.1| PREDICTED: protein TSS [Musa acuminata subsp...    70   8e-10
ref|XP_010914035.1| PREDICTED: protein TSS [Elaeis guineensis]         65   2e-08
ref|XP_008790119.1| PREDICTED: protein TSS isoform X2 [Phoenix d...    65   3e-08
ref|XP_008790118.1| PREDICTED: protein TSS isoform X1 [Phoenix d...    65   3e-08

>ref|XP_009399573.1| PREDICTED: protein TSS [Musa acuminata subsp. malaccensis]
 ref|XP_018682050.1| PREDICTED: protein TSS [Musa acuminata subsp. malaccensis]
          Length = 1865

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 38/85 (44%), Positives = 52/85 (61%)
 Frame = -1

Query: 696  LSSDISQSDEVVAEGNGSVNKELEESAADDNLHLAPEHSAGGEVPSVSTEPITPAQTISE 517
            + SD S S+E  AEGN ++NK LEE   DDN +   E     +   ++TE  T A+T  E
Sbjct: 1771 IPSDASHSNEAPAEGNDAINKVLEEPV-DDNQNPDTEQCNESKDAYLNTEQSTSAETTFE 1829

Query: 516  DLVQENTSPEAARSEDKHKCWADYS 442
            +++  +  PEAA+S DK KCWADYS
Sbjct: 1830 NVLPASKVPEAAKSTDKQKCWADYS 1854


>ref|XP_010914035.1| PREDICTED: protein TSS [Elaeis guineensis]
          Length = 1873

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -1

Query: 696  LSSDISQSDEVVAEGNGSVNKELEESAADDNLHLAPEHSAGGEVPSVSTEP-ITPAQTIS 520
            +SS+IS+S E  AE NG V   + E A DDN ++  E S  G+   +  E  IT   T S
Sbjct: 1778 VSSEISESSEASAEDNGDVAMVIVE-AKDDNQNVDVEQSVEGKDTKLDAEQDITSPGTNS 1836

Query: 519  EDLVQENTSPEAARSEDKHKCWADYS 442
            E+LV    SPEA R  DK KCWADYS
Sbjct: 1837 ENLVVAKESPEAGRGIDKPKCWADYS 1862


>ref|XP_008790119.1| PREDICTED: protein TSS isoform X2 [Phoenix dactylifera]
          Length = 1867

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -1

Query: 696  LSSDISQSDEVVAEGNGSVNKELEESAADDNLHLAPEHSAGGEVPSVSTEP-ITPAQTIS 520
            +SS+I +  E  AE NG+ NK + E A D+N +L  E S  GE  ++ +E  IT   TIS
Sbjct: 1773 VSSEIPEHTEASAEENGN-NKVIVE-AKDNNQNLEVEQSMEGEDTNLDSEQDITSPGTIS 1830

Query: 519  EDLVQENTSPEAARSEDKHKCWADYS 442
            E+LV    SPEA R  DK KCWADYS
Sbjct: 1831 ENLVAAEESPEAGRVTDKPKCWADYS 1856


>ref|XP_008790118.1| PREDICTED: protein TSS isoform X1 [Phoenix dactylifera]
          Length = 1881

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -1

Query: 696  LSSDISQSDEVVAEGNGSVNKELEESAADDNLHLAPEHSAGGEVPSVSTEP-ITPAQTIS 520
            +SS+I +  E  AE NG+ NK + E A D+N +L  E S  GE  ++ +E  IT   TIS
Sbjct: 1787 VSSEIPEHTEASAEENGN-NKVIVE-AKDNNQNLEVEQSMEGEDTNLDSEQDITSPGTIS 1844

Query: 519  EDLVQENTSPEAARSEDKHKCWADYS 442
            E+LV    SPEA R  DK KCWADYS
Sbjct: 1845 ENLVAAEESPEAGRVTDKPKCWADYS 1870


Top