BLASTX nr result
ID: Cheilocostus21_contig00018839
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00018839
(449 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009385680.1| PREDICTED: U3 small nucleolar RNA-associated... 93 5e-19
ref|XP_010934832.1| PREDICTED: U3 small nucleolar RNA-associated... 79 3e-14
gb|OAY77254.1| putative pentatricopeptide repeat-containing prot... 77 2e-13
ref|XP_020104733.1| U3 small nucleolar RNA-associated protein 4-... 76 3e-13
ref|XP_008810458.1| PREDICTED: U3 small nucleolar RNA-associated... 72 7e-12
ref|XP_008778534.1| PREDICTED: U3 small nucleolar RNA-associated... 67 4e-10
ref|XP_008778528.1| PREDICTED: U3 small nucleolar RNA-associated... 67 4e-10
ref|XP_008778520.1| PREDICTED: U3 small nucleolar RNA-associated... 67 4e-10
ref|XP_020276646.1| LOW QUALITY PROTEIN: U3 small nucleolar RNA-... 65 2e-09
gb|ONK63970.1| uncharacterized protein A4U43_C07F20780 [Asparagu... 65 2e-09
gb|PKA55771.1| Guanine nucleotide-binding protein subunit beta-l... 65 3e-09
ref|XP_002301144.1| transducin-related family protein [Populus t... 64 8e-09
dbj|BAF13099.2| Os03g0735100 [Oryza sativa Japonica Group] 62 2e-08
gb|EEC76134.1| hypothetical protein OsI_13420 [Oryza sativa Indi... 62 2e-08
ref|XP_015632246.1| PREDICTED: cirhin [Oryza sativa Japonica Gro... 62 2e-08
gb|AAT78790.1| expressed protein [Oryza sativa Japonica Group] >... 62 2e-08
ref|XP_006650549.1| PREDICTED: cirhin [Oryza brachyantha] 62 4e-08
ref|XP_011017102.1| PREDICTED: U3 small nucleolar RNA-associated... 60 1e-07
ref|XP_011017100.1| PREDICTED: U3 small nucleolar RNA-associated... 60 1e-07
ref|XP_020702863.1| U3 small nucleolar RNA-associated protein 4 ... 60 2e-07
>ref|XP_009385680.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
[Musa acuminata subsp. malaccensis]
Length = 806
Score = 92.8 bits (229), Expect = 5e-19
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +3
Query: 3 DEVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNS 182
DE P +DL L+KND +K+ G KRKRK ++Q+ +K+NFD FRDPALFVSH SDNS
Sbjct: 721 DESPIHSDLPLEKNDYNKIFGGKRKRKYLEQKSKPFNKKNFDFFAFRDPALFVSHMSDNS 780
Query: 183 LLLIEKQWM 209
LLLIEKQWM
Sbjct: 781 LLLIEKQWM 789
>ref|XP_010934832.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
[Elaeis guineensis]
Length = 818
Score = 79.3 bits (194), Expect = 3e-14
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +3
Query: 3 DEVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNS 182
DE P ++L L+K D SK AKRKRK+ Q++ K+NFD FRDP LFV H S+NS
Sbjct: 733 DEYPNGSELLLEKYDSSKHARAKRKRKNFDQQFKPNKKKNFDFCAFRDPVLFVGHLSENS 792
Query: 183 LLLIEKQWM 209
+L++EK+WM
Sbjct: 793 VLILEKRWM 801
>gb|OAY77254.1| putative pentatricopeptide repeat-containing protein [Ananas
comosus]
Length = 1190
Score = 77.0 bits (188), Expect = 2e-13
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +3
Query: 3 DEVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNS 182
+E+P +D L+ ND K+ +KRKRK+ ++E K+NFD+ FRDP LFV H S+NS
Sbjct: 593 NELPNGSDTFLENNDAIKITRSKRKRKNPEEESKRTTKRNFDICSFRDPVLFVGHLSENS 652
Query: 183 LLLIEKQWM 209
LL++EK+WM
Sbjct: 653 LLIVEKRWM 661
>ref|XP_020104733.1| U3 small nucleolar RNA-associated protein 4-like [Ananas comosus]
Length = 809
Score = 76.3 bits (186), Expect = 3e-13
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +3
Query: 3 DEVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNS 182
+E+P +D L+ ND K+ +KRKRK+ ++E K+NFD+ FRDP LFV H S+NS
Sbjct: 724 NELPNGSDPFLENNDAIKITRSKRKRKNPEEESKRTTKRNFDICSFRDPVLFVGHLSENS 783
Query: 183 LLLIEKQWM 209
LL++EK+WM
Sbjct: 784 LLIVEKRWM 792
>ref|XP_008810458.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
[Phoenix dactylifera]
Length = 817
Score = 72.4 bits (176), Expect = 7e-12
Identities = 37/69 (53%), Positives = 46/69 (66%)
Frame = +3
Query: 3 DEVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNS 182
DE P +D+ L K D SK AKRKRK+ QE K+NFD FRDP LFV H S+NS
Sbjct: 733 DEYPNGSDILL-KYDSSKNARAKRKRKNFDQEPRPNKKKNFDFCAFRDPVLFVGHASENS 791
Query: 183 LLLIEKQWM 209
+L++EK+WM
Sbjct: 792 VLILEKRWM 800
>ref|XP_008778534.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
isoform X3 [Phoenix dactylifera]
Length = 683
Score = 67.4 bits (163), Expect = 4e-10
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +3
Query: 6 EVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSL 185
E P +DL K D SK AKRKRK+ QE S +NFD F DP LFV H S+N+L
Sbjct: 601 EYPNGSDLL--KYDSSKNARAKRKRKNFDQESSPNKNKNFDFCAFGDPVLFVGHLSENNL 658
Query: 186 LLIEKQWM 209
L++EK+WM
Sbjct: 659 LILEKRWM 666
>ref|XP_008778528.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
isoform X2 [Phoenix dactylifera]
Length = 699
Score = 67.4 bits (163), Expect = 4e-10
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +3
Query: 6 EVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSL 185
E P +DL K D SK AKRKRK+ QE S +NFD F DP LFV H S+N+L
Sbjct: 617 EYPNGSDLL--KYDSSKNARAKRKRKNFDQESSPNKNKNFDFCAFGDPVLFVGHLSENNL 674
Query: 186 LLIEKQWM 209
L++EK+WM
Sbjct: 675 LILEKRWM 682
>ref|XP_008778520.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
isoform X1 [Phoenix dactylifera]
Length = 815
Score = 67.4 bits (163), Expect = 4e-10
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +3
Query: 6 EVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSL 185
E P +DL K D SK AKRKRK+ QE S +NFD F DP LFV H S+N+L
Sbjct: 733 EYPNGSDLL--KYDSSKNARAKRKRKNFDQESSPNKNKNFDFCAFGDPVLFVGHLSENNL 790
Query: 186 LLIEKQWM 209
L++EK+WM
Sbjct: 791 LILEKRWM 798
>ref|XP_020276646.1| LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 4
homolog [Asparagus officinalis]
Length = 806
Score = 65.5 bits (158), Expect = 2e-09
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 11/78 (14%)
Frame = +3
Query: 6 EVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYS-----------SRHKQNFDLIVFRDPA 152
E+P +LSL+K D SK AKRKRK I QE S++K NFD FRD A
Sbjct: 712 ELPNGPNLSLEKYDSSKNIKAKRKRKIIDQEVKPLSIDQEVKPLSKNK-NFDFFAFRDQA 770
Query: 153 LFVSHFSDNSLLLIEKQW 206
LFVSH S+ SLL++EK W
Sbjct: 771 LFVSHLSETSLLVVEKSW 788
>gb|ONK63970.1| uncharacterized protein A4U43_C07F20780 [Asparagus officinalis]
Length = 918
Score = 65.5 bits (158), Expect = 2e-09
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 11/78 (14%)
Frame = +3
Query: 6 EVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYS-----------SRHKQNFDLIVFRDPA 152
E+P +LSL+K D SK AKRKRK I QE S++K NFD FRD A
Sbjct: 824 ELPNGPNLSLEKYDSSKNIKAKRKRKIIDQEVKPLSIDQEVKPLSKNK-NFDFFAFRDQA 882
Query: 153 LFVSHFSDNSLLLIEKQW 206
LFVSH S+ SLL++EK W
Sbjct: 883 LFVSHLSETSLLVVEKSW 900
>gb|PKA55771.1| Guanine nucleotide-binding protein subunit beta-like protein B
[Apostasia shenzhenica]
Length = 817
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 DEVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSS-RHKQNFDLIVFRDPALFVSHFSDN 179
D++ D S K DC K+KRK EY + K+NFD F+DP LFV H SDN
Sbjct: 731 DDLQVGADQSPGKQDCPNNTMPKKKRKKAYFEYCKPQKKRNFDFCAFKDPVLFVGHLSDN 790
Query: 180 SLLLIEKQWM 209
SL +IEK W+
Sbjct: 791 SLFVIEKPWL 800
>ref|XP_002301144.1| transducin-related family protein [Populus trichocarpa]
gb|PNT49235.1| hypothetical protein POPTR_002G117500v3 [Populus trichocarpa]
Length = 819
Score = 63.5 bits (153), Expect = 8e-09
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +3
Query: 30 SLDKNDCSKLNGA-KRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQW 206
SL K + LNG KRK K Q E ++H++NF+L+ FRDP LF SH S+NS+L+++K W
Sbjct: 743 SLKKLQATTLNGGLKRKLKEYQPE--AKHRKNFELLAFRDPVLFFSHLSENSILILDKPW 800
Query: 207 M 209
M
Sbjct: 801 M 801
>dbj|BAF13099.2| Os03g0735100 [Oryza sativa Japonica Group]
Length = 444
Score = 62.4 bits (150), Expect = 2e-08
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3
Query: 36 DKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
+K D K + K KRK+ ++E + NFD F+DP LFV H SDNS+L++EK+WM
Sbjct: 370 EKIDSQKGSNKKLKRKAREEELRQEIRNNFDFFAFKDPVLFVGHLSDNSVLMVEKRWM 427
>gb|EEC76134.1| hypothetical protein OsI_13420 [Oryza sativa Indica Group]
Length = 807
Score = 62.4 bits (150), Expect = 2e-08
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3
Query: 36 DKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
+K D K + K KRK+ ++E + NFD F+DP LFV H SDNS+L++EK+WM
Sbjct: 733 EKIDSQKGSNKKLKRKAREEELRQEIRNNFDFFAFKDPVLFVGHLSDNSVLMVEKRWM 790
>ref|XP_015632246.1| PREDICTED: cirhin [Oryza sativa Japonica Group]
dbj|BAH01145.1| unnamed protein product [Oryza sativa Japonica Group]
gb|EEE59879.1| hypothetical protein OsJ_12479 [Oryza sativa Japonica Group]
dbj|BAS86253.1| Os03g0735100 [Oryza sativa Japonica Group]
Length = 807
Score = 62.4 bits (150), Expect = 2e-08
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3
Query: 36 DKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
+K D K + K KRK+ ++E + NFD F+DP LFV H SDNS+L++EK+WM
Sbjct: 733 EKIDSQKGSNKKLKRKAREEELRQEIRNNFDFFAFKDPVLFVGHLSDNSVLMVEKRWM 790
>gb|AAT78790.1| expressed protein [Oryza sativa Japonica Group]
gb|ABF98732.1| retrotransposon, putative, centromere-specific, expressed [Oryza
sativa Japonica Group]
Length = 982
Score = 62.4 bits (150), Expect = 2e-08
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3
Query: 36 DKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
+K D K + K KRK+ ++E + NFD F+DP LFV H SDNS+L++EK+WM
Sbjct: 908 EKIDSQKGSNKKLKRKAREEELRQEIRNNFDFFAFKDPVLFVGHLSDNSVLMVEKRWM 965
>ref|XP_006650549.1| PREDICTED: cirhin [Oryza brachyantha]
Length = 696
Score = 61.6 bits (148), Expect = 4e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +3
Query: 6 EVPADTDLSLDKNDCSKLNGAKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSL 185
++P + +K D K + K KRK ++E + NFD F+DP LFV H DNS+
Sbjct: 612 QLPNGALVPAEKTDSQKSSNKKLKRKGREEEPRQEIRNNFDFFAFKDPVLFVGHLLDNSV 671
Query: 186 LLIEKQWM 209
L++EK+WM
Sbjct: 672 LMVEKRWM 679
>ref|XP_011017102.1| PREDICTED: U3 small nucleolar RNA-associated protein 4-like isoform
X2 [Populus euphratica]
ref|XP_011013749.1| PREDICTED: U3 small nucleolar RNA-associated protein 4-like isoform
X2 [Populus euphratica]
Length = 704
Score = 60.1 bits (144), Expect = 1e-07
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 39 KNDCSKLNGA-KRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
K + LNG KRK K Q E S+H++NF+ FRDP LF+SH S+NS+L++++ WM
Sbjct: 631 KLQATTLNGGLKRKLKEYQPE--SKHRKNFEFFAFRDPVLFISHLSENSILILDRPWM 686
>ref|XP_011017100.1| PREDICTED: U3 small nucleolar RNA-associated protein 4-like isoform
X1 [Populus euphratica]
ref|XP_011013748.1| PREDICTED: U3 small nucleolar RNA-associated protein 4-like isoform
X1 [Populus euphratica]
Length = 819
Score = 60.1 bits (144), Expect = 1e-07
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 39 KNDCSKLNGA-KRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
K + LNG KRK K Q E S+H++NF+ FRDP LF+SH S+NS+L++++ WM
Sbjct: 746 KLQATTLNGGLKRKLKEYQPE--SKHRKNFEFFAFRDPVLFISHLSENSILILDRPWM 801
>ref|XP_020702863.1| U3 small nucleolar RNA-associated protein 4 homolog [Dendrobium
catenatum]
ref|XP_020702864.1| U3 small nucleolar RNA-associated protein 4 homolog [Dendrobium
catenatum]
gb|PKU85760.1| Guanine nucleotide-binding protein subunit beta-like protein B
[Dendrobium catenatum]
Length = 803
Score = 59.7 bits (143), Expect = 2e-07
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 66 AKRKRKSIQQEYSSRHKQNFDLIVFRDPALFVSHFSDNSLLLIEKQWM 209
A RKRK I QE S K+NF+ F+DP FV H S+NS+ ++EKQW+
Sbjct: 739 ANRKRKKIDQEISFHKKRNFEFCAFKDPVFFVGHLSENSVFVLEKQWV 786