BLASTX nr result

ID: Cheilocostus21_contig00018813 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00018813
         (468 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009394798.1| PREDICTED: CASP-like protein 4A3 [Musa acumi...    75   3e-13
ref|XP_018680993.1| PREDICTED: CASP-like protein 4A3 [Musa acumi...    64   4e-09
gb|PNT00945.1| hypothetical protein POPTR_015G075100v3 [Populus ...    57   1e-06
gb|PNT00944.1| hypothetical protein POPTR_015G075100v3 [Populus ...    57   2e-06
ref|XP_002321591.2| hypothetical protein POPTR_0015s08630g [Popu...    57   2e-06

>ref|XP_009394798.1| PREDICTED: CASP-like protein 4A3 [Musa acuminata subsp.
           malaccensis]
          Length = 252

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
 Frame = +2

Query: 56  MTSSRRSPPRDPEKPVPSAPPLE-ASSRPQSTAPEVGLTLTPIRSPPPPDGSAEESAPPS 232
           M+S  RSP  DPE P+P   P E ASSRPQ+ A    L  +PIRSP     S     PP 
Sbjct: 1   MSSPCRSPKLDPENPIPPPLPSEKASSRPQTPARVDALAGSPIRSPLRHADST--IPPPV 58

Query: 233 MAIVIADRLDKEDGPLPQDVIGNGGRTTEREQRVDTRSVXXXXXXXXXXXXXXXXXXVLC 412
           + +  A+R+ ++D      + G  G            ++                  +LC
Sbjct: 59  VTVAKANRMSRDDASAVARLDGTSGVRAGERGLGTASAIVRRQRVTRADPVLRVAAVLLC 118

Query: 413 MIAFSLVTSDKTEGWAGD 466
           MI+FS++ SDKTEGWAGD
Sbjct: 119 MISFSVMASDKTEGWAGD 136


>ref|XP_018680993.1| PREDICTED: CASP-like protein 4A3 [Musa acuminata subsp.
           malaccensis]
          Length = 279

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
 Frame = +2

Query: 59  TSSRRSPPRDPEKPVPS------APPLEASSRPQSTAPEVGLTLTPIRSP-------PPP 199
           T SR   P   ++PV S      + P +  SRPQ+ A E G    P+RSP        PP
Sbjct: 25  TPSRPQTPAREDRPVASPLRSLVSSPAKTPSRPQTPAREDGPVAYPLRSPLRRAELPTPP 84

Query: 200 DGSAEESAPPSMAIVIADRLDKEDGPLPQDVIGNGGRTTEREQRVDTRSVXXXXXXXXXX 379
               +E APP  A+ IA+RL ++     +  I  GG      +    R            
Sbjct: 85  RTPPDEPAPPP-AVTIANRLTRDGVSPAEKEISEGGGGVRAGEGGSVRGALGLRVAAF-- 141

Query: 380 XXXXXXXXVLCMIAFSLVTSDKTEGWAGD 466
                   VL MIAFS++ +DKT+GWAGD
Sbjct: 142 --------VLSMIAFSVMAADKTDGWAGD 162


>gb|PNT00945.1| hypothetical protein POPTR_015G075100v3 [Populus trichocarpa]
          Length = 234

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
 Frame = +2

Query: 74  SPPRDPEKPVPSAPPLEASSRPQSTAPEVGLTLTPIRSPPPPDGSAEESAPPSMAIVIAD 253
           SP   PEKP    PPL+ S      + +    L+PI    PPD  A  + P  M  V+ +
Sbjct: 59  SPSASPEKP---QPPLQKSVAVTDKSTQYSPALSPI----PPDNLA--APPQGMPAVVLN 109

Query: 254 RLDKEDGPLPQ-DVIGNGGRTTEREQRVDTRSVXXXXXXXXXXXXXXXXXXVLCMIAFSL 430
           R  +E GP      +G  GR+T    R   +                    VLC+I+FS+
Sbjct: 110 RAVREQGPAAGVKQVGPEGRSTASVMRGSRKE----EKMKIGELGFRVSEIVLCLISFSV 165

Query: 431 VTSDKTEGWAGD 466
           + +DKT+GW+GD
Sbjct: 166 MAADKTKGWSGD 177


>gb|PNT00944.1| hypothetical protein POPTR_015G075100v3 [Populus trichocarpa]
          Length = 295

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
 Frame = +2

Query: 74  SPPRDPEKPVPSAPPLEASSRPQSTAPEVGLTLTPIRSPPPPDGSAEESAPPSMAIVIAD 253
           SP   PEKP    PPL+ S      + +    L+PI    PPD  A  + P  M  V+ +
Sbjct: 59  SPSASPEKP---QPPLQKSVAVTDKSTQYSPALSPI----PPDNLA--APPQGMPAVVLN 109

Query: 254 RLDKEDGPLPQ-DVIGNGGRTTEREQRVDTRSVXXXXXXXXXXXXXXXXXXVLCMIAFSL 430
           R  +E GP      +G  GR+T    R   +                    VLC+I+FS+
Sbjct: 110 RAVREQGPAAGVKQVGPEGRSTASVMRGSRKE----EKMKIGELGFRVSEIVLCLISFSV 165

Query: 431 VTSDKTEGWAGD 466
           + +DKT+GW+GD
Sbjct: 166 MAADKTKGWSGD 177


>ref|XP_002321591.2| hypothetical protein POPTR_0015s08630g [Populus trichocarpa]
          Length = 355

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
 Frame = +2

Query: 74  SPPRDPEKPVPSAPPLEASSRPQSTAPEVGLTLTPIRSPPPPDGSAEESAPPSMAIVIAD 253
           SP   PEKP    PPL+ S      + +    L+PI    PPD  A  + P  M  V+ +
Sbjct: 119 SPSASPEKP---QPPLQKSVAVTDKSTQYSPALSPI----PPDNLA--APPQGMPAVVLN 169

Query: 254 RLDKEDGPLPQ-DVIGNGGRTTEREQRVDTRSVXXXXXXXXXXXXXXXXXXVLCMIAFSL 430
           R  +E GP      +G  GR+T    R   +                    VLC+I+FS+
Sbjct: 170 RAVREQGPAAGVKQVGPEGRSTASVMRGSRKE----EKMKIGELGFRVSEIVLCLISFSV 225

Query: 431 VTSDKTEGWAGD 466
           + +DKT+GW+GD
Sbjct: 226 MAADKTKGWSGD 237


Top