BLASTX nr result

ID: Cheilocostus21_contig00018706 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00018706
         (485 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402460.1| PREDICTED: probable mediator of RNA polymera...   197   6e-58
ref|XP_009393098.1| PREDICTED: probable mediator of RNA polymera...   183   8e-53
ref|XP_008798351.1| PREDICTED: probable mediator of RNA polymera...   171   2e-48
ref|XP_008798349.1| PREDICTED: probable mediator of RNA polymera...   171   3e-48
ref|XP_009412194.1| PREDICTED: probable mediator of RNA polymera...   168   1e-47
ref|XP_010909059.1| PREDICTED: probable mediator of RNA polymera...   167   5e-47
ref|XP_009412192.1| PREDICTED: probable mediator of RNA polymera...   168   6e-47
ref|XP_008798350.1| PREDICTED: probable mediator of RNA polymera...   164   8e-46
ref|XP_010909060.1| PREDICTED: probable mediator of RNA polymera...   161   2e-44
ref|XP_009412193.1| PREDICTED: probable mediator of RNA polymera...   161   2e-44
ref|XP_009399947.1| PREDICTED: probable mediator of RNA polymera...   147   3e-39
ref|XP_009386944.1| PREDICTED: probable mediator of RNA polymera...   146   1e-38
ref|XP_009420970.1| PREDICTED: probable mediator of RNA polymera...   143   1e-37
ref|XP_020087522.1| probable mediator of RNA polymerase II trans...   140   2e-36
ref|XP_009391608.1| PREDICTED: probable mediator of RNA polymera...   137   1e-35
ref|XP_020585980.1| probable mediator of RNA polymerase II trans...   137   2e-35
ref|XP_020103513.1| probable mediator of RNA polymerase II trans...   132   7e-34
gb|OAY68467.1| putative mediator of RNA polymerase II transcript...   132   8e-34
gb|POO00478.1| hypothetical protein TorRG33x02_035520 [Trema ori...   124   4e-33
gb|PKA67151.1| putative mediator of RNA polymerase II transcript...   127   1e-32

>ref|XP_009402460.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
          Length = 482

 Score =  197 bits (500), Expect = 6e-58
 Identities = 96/138 (69%), Positives = 111/138 (80%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           SKPH IS  Q KSQSI+SKQ +P + ESGPGRP + +SE  +  +VKP    D A L+RK
Sbjct: 345 SKPHNISIEQAKSQSIMSKQSKPVIAESGPGRPVKYTSELNVCSKVKPGPRQDTATLRRK 404

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PPM+PQN+ +Y EEAS+RAKLE AKRKLHEGY+QAENAKKQRTIQVMELHDIPKQAHN++
Sbjct: 405 PPMIPQNEPMYFEEASVRAKLEFAKRKLHEGYRQAENAKKQRTIQVMELHDIPKQAHNSR 464

Query: 365 PPFPKSKNHFRNWANVRH 418
            P  KSKNHFRNWAN  H
Sbjct: 465 QPILKSKNHFRNWANGWH 482


>ref|XP_009393098.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
          Length = 479

 Score =  183 bits (465), Expect = 8e-53
 Identities = 92/138 (66%), Positives = 105/138 (76%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           SKPH I   Q KSQ+IL KQ  P + ESGPGRP +   E+K+  E K K P D A L+RK
Sbjct: 343 SKPHEICIGQAKSQNILPKQSNPVISESGPGRPVKIGFEQKVCNEAKFKQPPDTAALRRK 402

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PPM+P++KS Y EEA ++AKLE  KRKLHEGYQQAENAKKQRTIQVMELHDIPKQAH N+
Sbjct: 403 PPMIPRDKSKYSEEAPVQAKLEATKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAH-NR 461

Query: 365 PPFPKSKNHFRNWANVRH 418
            P  KS+NH RNWAN RH
Sbjct: 462 HPILKSRNHLRNWANGRH 479


>ref|XP_008798351.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X3 [Phoenix dactylifera]
          Length = 451

 Score =  171 bits (433), Expect = 2e-48
 Identities = 86/138 (62%), Positives = 104/138 (75%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP   S  Q K Q IL K+ +P    SGPGRPA+  SE+K   E+KPK   D + +QRK
Sbjct: 315 TKPQEASAPQAKPQRILRKESKPLSANSGPGRPAKLPSEQKAVDEMKPK-QQDLSSVQRK 373

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PP++PQ+KS Y EEA +RAKLE AKRKLHEGYQQAENAKKQRTIQVMELHDIPKQ+H+++
Sbjct: 374 PPVIPQDKSKYSEEALVRAKLEAAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQSHHHR 433

Query: 365 PPFPKSKNHFRNWANVRH 418
            P  K +N FR+WAN RH
Sbjct: 434 QPNMKPRNQFRSWANGRH 451


>ref|XP_008798349.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X1 [Phoenix dactylifera]
          Length = 453

 Score =  171 bits (433), Expect = 3e-48
 Identities = 86/138 (62%), Positives = 104/138 (75%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP   S  Q K Q IL K+ +P    SGPGRPA+  SE+K   E+KPK   D + +QRK
Sbjct: 317 TKPQEASAPQAKPQRILRKESKPLSANSGPGRPAKLPSEQKAVDEMKPK-QQDLSSVQRK 375

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PP++PQ+KS Y EEA +RAKLE AKRKLHEGYQQAENAKKQRTIQVMELHDIPKQ+H+++
Sbjct: 376 PPVIPQDKSKYSEEALVRAKLEAAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQSHHHR 435

Query: 365 PPFPKSKNHFRNWANVRH 418
            P  K +N FR+WAN RH
Sbjct: 436 QPNMKPRNQFRSWANGRH 453


>ref|XP_009412194.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X3 [Musa acuminata subsp.
           malaccensis]
          Length = 401

 Score =  168 bits (425), Expect = 1e-47
 Identities = 85/132 (64%), Positives = 103/132 (78%)
 Frame = +2

Query: 14  HIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRKPPM 193
           H I   Q  SQSILSKQ +  +VESGPG+ A+ + E+K   E K K   D A L+RKPPM
Sbjct: 268 HEICVWQATSQSILSKQSKAVIVESGPGKSAKFAPEQKASSEAKVKQQQDTAALKRKPPM 327

Query: 194 VPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNKPPF 373
           + Q+KS Y EEAS++AKLE+ +RKLHEGY+QAENAKKQRTIQVMELHDIPKQAHN++ P 
Sbjct: 328 ILQDKSKYSEEASVQAKLEVVRRKLHEGYRQAENAKKQRTIQVMELHDIPKQAHNSQ-PV 386

Query: 374 PKSKNHFRNWAN 409
           PKS++HFRN AN
Sbjct: 387 PKSRSHFRNRAN 398


>ref|XP_010909059.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X1 [Elaeis guineensis]
          Length = 450

 Score =  167 bits (424), Expect = 5e-47
 Identities = 84/137 (61%), Positives = 103/137 (75%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP   S  Q K Q I+ K+ +P   + GPGRPAR  SE+K   E+K K   D + +QRK
Sbjct: 314 AKPQEASAFQAKPQGIMRKESKPISADFGPGRPARLPSEQKAGNEMKAK-QQDLSAIQRK 372

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PPM+PQ+KS Y EEA +RAKLE AKRKLHEGYQQAENAKKQRTIQVMELHDIPKQ+H+++
Sbjct: 373 PPMIPQDKSKYSEEALVRAKLEAAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQSHHHR 432

Query: 365 PPFPKSKNHFRNWANVR 415
            P  K +N+FR+WAN R
Sbjct: 433 QPNMKPRNNFRSWANGR 449


>ref|XP_009412192.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 477

 Score =  168 bits (425), Expect = 6e-47
 Identities = 85/132 (64%), Positives = 103/132 (78%)
 Frame = +2

Query: 14  HIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRKPPM 193
           H I   Q  SQSILSKQ +  +VESGPG+ A+ + E+K   E K K   D A L+RKPPM
Sbjct: 344 HEICVWQATSQSILSKQSKAVIVESGPGKSAKFAPEQKASSEAKVKQQQDTAALKRKPPM 403

Query: 194 VPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNKPPF 373
           + Q+KS Y EEAS++AKLE+ +RKLHEGY+QAENAKKQRTIQVMELHDIPKQAHN++ P 
Sbjct: 404 ILQDKSKYSEEASVQAKLEVVRRKLHEGYRQAENAKKQRTIQVMELHDIPKQAHNSQ-PV 462

Query: 374 PKSKNHFRNWAN 409
           PKS++HFRN AN
Sbjct: 463 PKSRSHFRNRAN 474


>ref|XP_008798350.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X2 [Phoenix dactylifera]
          Length = 452

 Score =  164 bits (416), Expect = 8e-46
 Identities = 85/138 (61%), Positives = 103/138 (74%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP   S  Q K Q IL K+ +P    SGPGRPA+  SE+K   E+KPK   D + +QRK
Sbjct: 317 TKPQEASAPQAKPQRILRKESKPLSANSGPGRPAKLPSEQKAVDEMKPK-QQDLSSVQRK 375

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PP++PQ+ S Y EEA +RAKLE AKRKLHEGYQQAENAKKQRTIQVMELHDIPKQ+H+++
Sbjct: 376 PPVIPQD-SKYSEEALVRAKLEAAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQSHHHR 434

Query: 365 PPFPKSKNHFRNWANVRH 418
            P  K +N FR+WAN RH
Sbjct: 435 QPNMKPRNQFRSWANGRH 452


>ref|XP_010909060.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X2 [Elaeis guineensis]
          Length = 449

 Score =  161 bits (407), Expect = 2e-44
 Identities = 83/137 (60%), Positives = 102/137 (74%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP   S  Q K Q I+ K+ +P   + GPGRPAR  SE+K   E+K K   D + +QRK
Sbjct: 314 AKPQEASAFQAKPQGIMRKESKPISADFGPGRPARLPSEQKAGNEMKAK-QQDLSAIQRK 372

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           PPM+PQ+ S Y EEA +RAKLE AKRKLHEGYQQAENAKKQRTIQVMELHDIPKQ+H+++
Sbjct: 373 PPMIPQD-SKYSEEALVRAKLEAAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQSHHHR 431

Query: 365 PPFPKSKNHFRNWANVR 415
            P  K +N+FR+WAN R
Sbjct: 432 QPNMKPRNNFRSWANGR 448


>ref|XP_009412193.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 476

 Score =  161 bits (408), Expect = 2e-44
 Identities = 84/132 (63%), Positives = 102/132 (77%)
 Frame = +2

Query: 14  HIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRKPPM 193
           H I   Q  SQSILSKQ +  +VESGPG+ A+ + E+K   E K K   D A L+RKPPM
Sbjct: 344 HEICVWQATSQSILSKQSKAVIVESGPGKSAKFAPEQKASSEAKVKQQQDTAALKRKPPM 403

Query: 194 VPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNKPPF 373
           + Q+ S Y EEAS++AKLE+ +RKLHEGY+QAENAKKQRTIQVMELHDIPKQAHN++ P 
Sbjct: 404 ILQD-SKYSEEASVQAKLEVVRRKLHEGYRQAENAKKQRTIQVMELHDIPKQAHNSQ-PV 461

Query: 374 PKSKNHFRNWAN 409
           PKS++HFRN AN
Sbjct: 462 PKSRSHFRNRAN 473


>ref|XP_009399947.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
          Length = 476

 Score =  147 bits (372), Expect = 3e-39
 Identities = 74/139 (53%), Positives = 97/139 (69%)
 Frame = +2

Query: 2   PSKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQR 181
           P KP      Q + + I ++Q +P +++SGPGRP +    +   R++ PK   ++  L+R
Sbjct: 339 PGKPQDPGIGQGRCEGIANRQSKPVILDSGPGRPPKLPHTQNAGRQMNPKHHQNSGALRR 398

Query: 182 KPPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNN 361
           K  +VPQ+K+   EE+SIR KLE+AKRKLHEGYQQAENAKKQRTIQVMELHD+PKQ HN 
Sbjct: 399 KLLVVPQDKTKCSEESSIREKLELAKRKLHEGYQQAENAKKQRTIQVMELHDLPKQVHNR 458

Query: 362 KPPFPKSKNHFRNWANVRH 418
            P   KS+N  R+WAN RH
Sbjct: 459 HPVL-KSRNQIRSWANGRH 476


>ref|XP_009386944.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
          Length = 477

 Score =  146 bits (368), Expect = 1e-38
 Identities = 76/128 (59%), Positives = 92/128 (71%)
 Frame = +2

Query: 32  QVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRKPPMVPQNKS 211
           Q K++ IL+KQ +P + +SGPGRP +     K   E+KPK   D A  +RK     Q+K+
Sbjct: 350 QSKNEGILNKQSKPVIPDSGPGRPPKLVRTLKAGGEMKPKQHQDDAGPRRKQLATTQDKT 409

Query: 212 IYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNKPPFPKSKNH 391
            + EE SIR KLE+AKRKLHEGYQQAENAKKQRTIQVMELHD+P Q H NK P PKS+N+
Sbjct: 410 KFSEEVSIRTKLELAKRKLHEGYQQAENAKKQRTIQVMELHDLPAQRH-NKHPVPKSRNN 468

Query: 392 FRNWANVR 415
            RNWAN R
Sbjct: 469 IRNWANGR 476


>ref|XP_009420970.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
          Length = 469

 Score =  143 bits (361), Expect = 1e-37
 Identities = 73/138 (52%), Positives = 96/138 (69%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP  +   Q K Q ++++Q    + +SGPGR +  SSE+K   E       + A LQRK
Sbjct: 329 TKPQELCVVQEKPQVMINRQNNRVIPDSGPGRSSTLSSEQKNGNETNHSKQQEVAALQRK 388

Query: 185 PPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNK 364
           P ++ Q+KS Y EEAS+RAKLE++KRKLHEGYQQA+NAK+QRTIQVMEL DIP+QAHN+ 
Sbjct: 389 PRIILQDKSKYSEEASVRAKLEVSKRKLHEGYQQADNAKRQRTIQVMELQDIPRQAHNSG 448

Query: 365 PPFPKSKNHFRNWANVRH 418
               KS+N  R+ AN RH
Sbjct: 449 QSVMKSRNLIRSSANSRH 466


>ref|XP_020087522.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Ananas comosus]
 gb|OAY64769.1| putative mediator of RNA polymerase II transcription subunit 26b
           [Ananas comosus]
          Length = 467

 Score =  140 bits (352), Expect = 2e-36
 Identities = 76/139 (54%), Positives = 93/139 (66%)
 Frame = +2

Query: 2   PSKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQR 181
           P+KP   S++Q + Q  + K  +P   ESGPGRP + + E        PK     A  QR
Sbjct: 337 PTKPLEASSSQQRPQGHMIKPTKPLNTESGPGRPQKSTFE--------PKQSQTLAADQR 388

Query: 182 KPPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNN 361
           +  + P +K    EEAS+RAKLE+AKRKLHEGYQQAENAKKQRTIQVMEL DIPKQ+++N
Sbjct: 389 RSAIPPTDKPNCSEEASVRAKLELAKRKLHEGYQQAENAKKQRTIQVMELQDIPKQSNHN 448

Query: 362 KPPFPKSKNHFRNWANVRH 418
           +    K KNHFRNWAN RH
Sbjct: 449 RQFNMKPKNHFRNWANGRH 467


>ref|XP_009391608.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
 ref|XP_009391609.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
 ref|XP_009391610.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Musa acuminata subsp. malaccensis]
          Length = 439

 Score =  137 bits (346), Expect = 1e-35
 Identities = 75/139 (53%), Positives = 97/139 (69%)
 Frame = +2

Query: 2   PSKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQR 181
           P+KP      + K + I++KQ +P  V SGPGR  + +S++K   E+K     D A +QR
Sbjct: 304 PAKPQEHLVREAKHEIIVNKQSKP--VMSGPGRQLKLASDQKAHSEMKTTQHQDNAGVQR 361

Query: 182 KPPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNN 361
           KP +V  +K+   EEA I+AKLE+AKRKLHEGYQ AEN KKQRTIQVMELHD+PKQAH N
Sbjct: 362 KPSVVSLDKTRNSEEALIQAKLEVAKRKLHEGYQLAENTKKQRTIQVMELHDLPKQAH-N 420

Query: 362 KPPFPKSKNHFRNWANVRH 418
           + P  KS+N  R+WA+ RH
Sbjct: 421 RHPILKSRNQSRSWASGRH 439


>ref|XP_020585980.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Phalaenopsis equestris]
 ref|XP_020585981.1| probable mediator of RNA polymerase II transcription subunit 26b
           [Phalaenopsis equestris]
          Length = 450

 Score =  137 bits (345), Expect = 2e-35
 Identities = 73/138 (52%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
 Frame = +2

Query: 5   SKPHIISTTQVKS-QSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQR 181
           +KPH I +TQ K  Q+I+ K  +P+  +SGPGRP + SSE+K   ++          +QR
Sbjct: 320 AKPHAIPSTQSKPHQTIVDKPSKPSTADSGPGRPLKLSSEQKSNTQLSN--------VQR 371

Query: 182 KPPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNN 361
           K    PQ+K    +EAS+ AKLE AKR+LHE YQQAENAK+QRTIQVME++D+PKQ+HN 
Sbjct: 372 KLSNGPQDKLKNSDEASVDAKLEQAKRRLHERYQQAENAKRQRTIQVMEINDLPKQSHNQ 431

Query: 362 KPPFPKSKNHFRNWANVR 415
           +P   K KN FRNWAN R
Sbjct: 432 RPSNMKPKNQFRNWANAR 449


>ref|XP_020103513.1| probable mediator of RNA polymerase II transcription subunit 26b
           isoform X1 [Ananas comosus]
          Length = 429

 Score =  132 bits (333), Expect = 7e-34
 Identities = 77/143 (53%), Positives = 91/143 (63%), Gaps = 15/143 (10%)
 Frame = +2

Query: 32  QVKSQSILSKQGQPAVVESGPGRPARDSSERKMRR----------EVKPKLPHDAALLQR 181
           Q K Q I +K   P   E    R  + +SE+K  +          E + K P D++ +QR
Sbjct: 286 QAKPQCIANKPIMPRKAEFELRRAPKVASEQKALKLASEQKAAFGESRFKKPQDSSTVQR 345

Query: 182 KPPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAH-- 355
           K PMVP +KS   EEAS+RAKLE+AKRKLHEGYQQAENAKKQRTIQVMEL DIPKQAH  
Sbjct: 346 KQPMVPTDKSKLSEEASVRAKLELAKRKLHEGYQQAENAKKQRTIQVMELQDIPKQAHQN 405

Query: 356 ---NNKPPFPKSKNHFRNWANVR 415
               N+ P  K KNH R+WAN R
Sbjct: 406 RVQQNRQPNVKPKNHIRSWANGR 428


>gb|OAY68467.1| putative mediator of RNA polymerase II transcription subunit 26b
           [Ananas comosus]
          Length = 430

 Score =  132 bits (333), Expect = 8e-34
 Identities = 77/143 (53%), Positives = 91/143 (63%), Gaps = 15/143 (10%)
 Frame = +2

Query: 32  QVKSQSILSKQGQPAVVESGPGRPARDSSERKMRR----------EVKPKLPHDAALLQR 181
           Q K Q I +K   P   E    R  + +SE+K  +          E + K P D++ +QR
Sbjct: 287 QAKPQCIANKPIMPRKAEFELRRAPKVASEQKALKLASEQKAAFGESRFKKPQDSSTVQR 346

Query: 182 KPPMVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAH-- 355
           K PMVP +KS   EEAS+RAKLE+AKRKLHEGYQQAENAKKQRTIQVMEL DIPKQAH  
Sbjct: 347 KQPMVPTDKSKLSEEASVRAKLELAKRKLHEGYQQAENAKKQRTIQVMELQDIPKQAHQN 406

Query: 356 ---NNKPPFPKSKNHFRNWANVR 415
               N+ P  K KNH R+WAN R
Sbjct: 407 RVQQNRQPNVKPKNHIRSWANGR 429


>gb|POO00478.1| hypothetical protein TorRG33x02_035520 [Trema orientalis]
          Length = 179

 Score =  124 bits (312), Expect = 4e-33
 Identities = 65/135 (48%), Positives = 86/135 (63%)
 Frame = +2

Query: 11  PHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRKPP 190
           P      Q+K Q  + K  +P+  ESGPGRP + S+E+K   ++K +   D   LQ++P 
Sbjct: 44  PRESKNQQMKKQEAVIKPTRPSNTESGPGRPPKISNEQKASNDMKFEKKSDKPALQKRPF 103

Query: 191 MVPQNKSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNNKPP 370
            VPQNK    +E +++ KLE  KRKL E YQQAENAK+QRTIQVMELHD+PKQ   N+ P
Sbjct: 104 SVPQNKFKSSDEDAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQGLVNRNP 163

Query: 371 FPKSKNHFRNWANVR 415
             K  NH R+W + R
Sbjct: 164 HLKPGNHNRHWGHGR 178


>gb|PKA67151.1| putative mediator of RNA polymerase II transcription subunit 26b
           [Apostasia shenzhenica]
          Length = 321

 Score =  127 bits (319), Expect = 1e-32
 Identities = 72/139 (51%), Positives = 93/139 (66%), Gaps = 2/139 (1%)
 Frame = +2

Query: 5   SKPHIISTTQVKSQSILSKQGQPAVVESGPGRPARDSSERKMRREVKPKLPHDAALLQRK 184
           +KP ++S+ Q K+Q +++K  +    + GPGRP++ + E+K+  EV          + RK
Sbjct: 190 TKPPVVSSEQPKAQGVVNKLSKLPSSDFGPGRPSKLAPEQKLSTEVSG--------VHRK 241

Query: 185 PPMVPQN-KSIYPEEASIRAKLEIAKRKLHEGYQQAENAKKQRTIQVMELHDIPKQAHNN 361
               PQ+ KS   EEAS+RAKLEIAKRKL EGYQ AENAKKQRTIQVMELHD+PKQ H  
Sbjct: 242 SSNTPQDVKSKNMEEASVRAKLEIAKRKLQEGYQLAENAKKQRTIQVMELHDLPKQPHAY 301

Query: 362 KPPF-PKSKNHFRNWANVR 415
           +P    K KN F+NWAN R
Sbjct: 302 RPTSGMKPKNQFKNWANQR 320


Top