BLASTX nr result

ID: Cheilocostus21_contig00018514 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00018514
         (1185 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018682715.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...    44   1e-07
ref|XP_009410221.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...    46   1e-07
ref|XP_009410222.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...    46   1e-07
ref|XP_009403041.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...    44   1e-07
ref|XP_009381596.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...    44   4e-06

>ref|XP_018682715.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X1
            [Musa acuminata subsp. malaccensis]
          Length = 419

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 26/38 (68%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 1041 KLSKTA-TLASFAEFSALLPPLPVLSDAAFLIRKPLPE 1151
            KLSK   TLASF E S LLPP PVL DA FLI K  PE
Sbjct: 85   KLSKNPRTLASFPESSDLLPPFPVLGDAGFLIDKIQPE 122



 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 823 MSSC--PSGGRTFSIDLDIVRXXXXXXXXXXXXXXXXXXXXXXXRTISFKKARSPRKRPN 996
           MSSC    GGR +  DLDIV+                        TIS K+AR+PRKRPN
Sbjct: 1   MSSCLGGGGGRAYGFDLDIVKPSSPSSGRSSDSSSPSSTLSESSNTISIKRARTPRKRPN 60


>ref|XP_009410221.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X1
            [Musa acuminata subsp. malaccensis]
          Length = 418

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 26/38 (68%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 1041 KLSK-TATLASFAEFSALLPPLPVLSDAAFLIRKPLPE 1151
            KLSK T    SF E S LLPP PVLSDAAFLI  P PE
Sbjct: 89   KLSKDTKPFDSFPETSDLLPPFPVLSDAAFLIHNPQPE 126



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = +1

Query: 823 MSSCPSGG---RTFSIDLDIVRXXXXXXXXXXXXXXXXXXXXXXX---RTISFKKARSPR 984
           MSSC SGG   RT+  DLDIV+                          R IS KKAR+PR
Sbjct: 1   MSSCLSGGGGGRTYGFDLDIVKPSSSSSGRSLHSSSPSSTLSESSNSPRAISIKKARTPR 60

Query: 985 KRPN 996
           KRPN
Sbjct: 61  KRPN 64


>ref|XP_009410222.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X2
            [Musa acuminata subsp. malaccensis]
          Length = 416

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 26/38 (68%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 1041 KLSK-TATLASFAEFSALLPPLPVLSDAAFLIRKPLPE 1151
            KLSK T    SF E S LLPP PVLSDAAFLI  P PE
Sbjct: 89   KLSKDTKPFDSFPETSDLLPPFPVLSDAAFLIHNPQPE 126



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = +1

Query: 823 MSSCPSGG---RTFSIDLDIVRXXXXXXXXXXXXXXXXXXXXXXX---RTISFKKARSPR 984
           MSSC SGG   RT+  DLDIV+                          R IS KKAR+PR
Sbjct: 1   MSSCLSGGGGGRTYGFDLDIVKPSSSSSGRSLHSSSPSSTLSESSNSPRAISIKKARTPR 60

Query: 985 KRPN 996
           KRPN
Sbjct: 61  KRPN 64


>ref|XP_009403041.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X2
            [Musa acuminata subsp. malaccensis]
          Length = 416

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 26/38 (68%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +3

Query: 1041 KLSKTA-TLASFAEFSALLPPLPVLSDAAFLIRKPLPE 1151
            KLSK   TLASF E S LLPP PVL DA FLI K  PE
Sbjct: 85   KLSKNPRTLASFPESSDLLPPFPVLGDAGFLIDKIQPE 122



 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 823 MSSC--PSGGRTFSIDLDIVRXXXXXXXXXXXXXXXXXXXXXXXRTISFKKARSPRKRPN 996
           MSSC    GGR +  DLDIV+                        TIS K+AR+PRKRPN
Sbjct: 1   MSSCLGGGGGRAYGFDLDIVKPSSPSSGRSSDSSSPSSTLSESSNTISIKRARTPRKRPN 60


>ref|XP_009381596.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 [Musa acuminata
            subsp. malaccensis]
          Length = 355

 Score = 43.9 bits (102), Expect(2) = 4e-06
 Identities = 25/38 (65%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 1041 KLSK-TATLASFAEFSALLPPLPVLSDAAFLIRKPLPE 1151
            KLSK T    SF EFS LLPP PVL DAA LI KP  E
Sbjct: 89   KLSKNTRPFDSFPEFSELLPPFPVLGDAAVLIHKPQSE 126



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = +1

Query: 823 MSSCPSGG---RTFSIDLDIVRXXXXXXXXXXXXXXXXXXXXXXXR---TISFKKARSPR 984
           MS+C SGG   RT+  DLDIV+                            IS KKAR+PR
Sbjct: 1   MSACLSGGGGGRTYGFDLDIVKPSSSSSGRSLHSSSPSSTLSESSNLPLAISIKKARTPR 60

Query: 985 KRPN 996
           KRPN
Sbjct: 61  KRPN 64


Top