BLASTX nr result

ID: Cheilocostus21_contig00018415 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00018415
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018678901.1| PREDICTED: endonuclease III homolog 2, chlor...    74   1e-12
ref|XP_009393783.1| PREDICTED: endonuclease III homolog 2, chlor...    74   1e-12
ref|XP_009416017.1| PREDICTED: endonuclease III homolog 1, chlor...    61   4e-08

>ref|XP_018678901.1| PREDICTED: endonuclease III homolog 2, chloroplastic isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 378

 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 MPFALVLAINQLLQLPPAKTLMMPVTXXXXXXXXSKAKIPNSELNPGSHSFDXXXXXXXX 195
           +P +L+  I  L     A+ L MPVT        S+A+ P+S+L+PG+            
Sbjct: 8   LPRSLLARIPFLPLSSRARALTMPVTRRPSRSLASEARSPDSKLDPGTECPGGVSDREKR 67

Query: 194 XXXXXXGVN--MKADEEFMKEEAADHNVSNLFDIEDFAYEEGNISAVADGIKLSSSFSPT 21
                  V   ++ DE+  KEEAAD  V +L DIEDFAY++ N+SA+++ + L SSF  +
Sbjct: 68  AHLRKKRVKRIVEIDEKRAKEEAADRKVCDLIDIEDFAYDKVNLSAISNDVNLDSSFPAS 127

Query: 20  KRKYTH 3
           KRK TH
Sbjct: 128 KRKSTH 133


>ref|XP_009393783.1| PREDICTED: endonuclease III homolog 2, chloroplastic isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 384

 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 MPFALVLAINQLLQLPPAKTLMMPVTXXXXXXXXSKAKIPNSELNPGSHSFDXXXXXXXX 195
           +P +L+  I  L     A+ L MPVT        S+A+ P+S+L+PG+            
Sbjct: 8   LPRSLLARIPFLPLSSRARALTMPVTRRPSRSLASEARSPDSKLDPGTECPGGVSDREKR 67

Query: 194 XXXXXXGVN--MKADEEFMKEEAADHNVSNLFDIEDFAYEEGNISAVADGIKLSSSFSPT 21
                  V   ++ DE+  KEEAAD  V +L DIEDFAY++ N+SA+++ + L SSF  +
Sbjct: 68  AHLRKKRVKRIVEIDEKRAKEEAADRKVCDLIDIEDFAYDKVNLSAISNDVNLDSSFPAS 127

Query: 20  KRKYTH 3
           KRK TH
Sbjct: 128 KRKSTH 133


>ref|XP_009416017.1| PREDICTED: endonuclease III homolog 1, chloroplastic isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 389

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
 Frame = -2

Query: 371 PFALVLAINQLLQLPP----AKTLMMPVTXXXXXXXXSKAKIPNSELNP----------- 237
           P  L  A++  + L P    AKTL M VT        S+A+ P+SE +P           
Sbjct: 3   PSLLAQALSARISLLPLSSHAKTLRMSVTRRSSRSLSSEAESPSSEFDPNLDFQHLEPDK 62

Query: 236 GSHSFDXXXXXXXXXXXXXXGVNMKADEEFMKEEAADHNVSNLFDIEDFAYEEGNISAVA 57
           G    D               + +  D E  KEE+AD  VS   DIEDFAY + N+SA +
Sbjct: 63  GCDVSDGEKRFYGRKKRAKRIIEV--DGETAKEESADKKVSGPIDIEDFAYHKINLSATS 120

Query: 56  DGIKLSSSFSPTKRKYTH 3
           +GI +S+SF   K K TH
Sbjct: 121 NGINISASFPTHKTKSTH 138


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