BLASTX nr result

ID: Cheilocostus21_contig00018255 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00018255
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315143.2| hypothetical protein POPTR_0010s19270g [Popu...    57   2e-06
ref|XP_008811683.1| PREDICTED: protein MALE DISCOVERER 2 [Phoeni...    55   8e-06

>ref|XP_002315143.2| hypothetical protein POPTR_0010s19270g [Populus trichocarpa]
 gb|PNT17318.1| hypothetical protein POPTR_010G185300v3 [Populus trichocarpa]
          Length = 649

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = +1

Query: 277 LKMEKWLFNMLFVVPWFPLAY-LQLCASLNEDGRALLAIKEKIIVDPFGALSSW 435
           ++++ W FN L VV  F L   L LC+SLNE+G ALL ++E+I+ DP+GAL+SW
Sbjct: 1   MEIKNWKFNRLGVVILFLLYQNLILCSSLNEEGMALLRLRERIVSDPYGALNSW 54


>ref|XP_008811683.1| PREDICTED: protein MALE DISCOVERER 2 [Phoenix dactylifera]
          Length = 469

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +1

Query: 283 MEKW-LFNMLFVVPWFPLAY--LQLCASLNEDGRALLAIKEKIIVDPFGALSSW 435
           ME+W L  M   + W  L Y  L+LC S+N +GRALL  KE++ VDP GALS+W
Sbjct: 1   MERWRLLQMGSFLLWVALVYQRLELCVSINAEGRALLRFKERVEVDPHGALSNW 54


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