BLASTX nr result

ID: Cheilocostus21_contig00018004 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00018004
         (549 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_101974884.1| LysM peptidoglycan-binding domain-containing...    58   2e-06

>ref|WP_101974884.1| LysM peptidoglycan-binding domain-containing protein [Facklamia
           hominis]
 gb|PKY93412.1| hypothetical protein CYJ56_02970 [Facklamia hominis]
          Length = 732

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 51/136 (37%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = -2

Query: 539 EKSKHSKPSQEGKCGRKKKTELPVPYQECNSEPSSKSKH-EENGILEPSHVGNSGHKEEG 363
           E+SK  KPS++    +K+ TE   P      EPS   K  EE+  +EPS        EE 
Sbjct: 262 EESKPVKPSED----KKETTEESKPV-----EPSEDKKTTEESKPVEPSKEDKKT-TEES 311

Query: 362 KPLEPSQEDKSGPGQSKVSEPPQEGKFGNEESKLSEPSDEGXXXXXXXXXXXSVPSEIDK 183
           KP+EPS+EDK    +SK  EP +E K   +ESK  EPS E              PSE DK
Sbjct: 312 KPVEPSKEDKKTTDESKPVEPSKEDKKTTDESKPVEPSKE--DKKTTEEDKPVTPSEEDK 369

Query: 182 SAQKKKSKPTQADAPL 135
                  K T+ D P+
Sbjct: 370 -------KTTEEDKPV 378



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
 Frame = -2

Query: 545 QKEKSKHSKPSQEGKCGRKKKTELPVPYQECNSEPSSKSKH--EENGILEPSHVGNSGHK 372
           +KE ++ SKP +  +   KK TE   P      EPS + K   EE+  +EPS        
Sbjct: 273 KKETTEESKPVEPSE--DKKTTEESKPV-----EPSKEDKKTTEESKPVEPSKEDKKT-T 324

Query: 371 EEGKPLEPSQEDKSGPGQSKVSEPPQEGKFGNEESKLSEPSDEGXXXXXXXXXXXSVPSE 192
           +E KP+EPS+EDK    +SK  EP +E K   EE K   PS+E                E
Sbjct: 325 DESKPVEPSKEDKKTTDESKPVEPSKEDKKTTEEDKPVTPSEEDKKTTEEDKPVTPSEDE 384

Query: 191 IDKSAQKKKSKPTQAD 144
            + + + K  +P++ D
Sbjct: 385 KETTEESKPVEPSEED 400


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