BLASTX nr result

ID: Cheilocostus21_contig00017392 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00017392
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009381661.1| PREDICTED: chloride channel protein CLC-f [M...    73   3e-12

>ref|XP_009381661.1| PREDICTED: chloride channel protein CLC-f [Musa acuminata subsp.
           malaccensis]
          Length = 763

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 49/101 (48%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = +1

Query: 109 MSGDE--VDDHKALLPSAVAASDLDLEAVGPSSELA--SAGTGRTPMSPSKIGIKXXXXX 276
           MSG E  +DDHKALL SA AAS+LDLEA GPSS  A  SAG   TP S  K GI      
Sbjct: 1   MSGGEFELDDHKALLRSAPAASNLDLEAQGPSSGSAGTSAGATGTPSSARKSGIGDLLRH 60

Query: 277 XXXXXXXXXXXXXXXXXXXXPTLADGRSHEVLGVGAPPEWA 399
                               P   DGRSH+ L  GAPPEWA
Sbjct: 61  LDRGLSNRGHSRRHLDRGGFPLPPDGRSHDALSDGAPPEWA 101


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