BLASTX nr result

ID: Cheilocostus21_contig00016326 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00016326
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009413582.1| PREDICTED: transcription factor bHLH143-like...    73   2e-12
ref|XP_009383577.1| PREDICTED: transcription factor bHLH143 [Mus...    62   2e-08

>ref|XP_009413582.1| PREDICTED: transcription factor bHLH143-like [Musa acuminata subsp.
           malaccensis]
 ref|XP_018686411.1| PREDICTED: transcription factor bHLH143-like [Musa acuminata subsp.
           malaccensis]
          Length = 303

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
 Frame = -2

Query: 246 MGRDSSPQANLQHACWQFSNINSTSSNLQFGVSPQNFNSVMFPANVNRY-------AASP 88
           MG+D +P  + QH  W+FS++NS S+  +F + PQN NS++ PA VN Y       AA  
Sbjct: 1   MGKDITPHFDSQHPSWRFSHMNSASNIQRFDIGPQNDNSMLLPACVNPYGCVFSVNAAKQ 60

Query: 87  LPGVYTNKSGQ----MMPLLFPSHKPPE 16
            PGV TNKS Q    ++P L PS +PPE
Sbjct: 61  FPGVCTNKSLQKISSLIPPLTPSQRPPE 88


>ref|XP_009383577.1| PREDICTED: transcription factor bHLH143 [Musa acuminata subsp.
           malaccensis]
          Length = 297

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
 Frame = -2

Query: 246 MGRDSSPQANLQHACWQFSNINSTSSNLQFGVSPQNFNSVMFPANV------NRYAASPL 85
           M +D +P+  +QH+ WQFSN+N  S+  QF +  QN NS++ PA V      +    +P 
Sbjct: 1   MEKDMNPRTGMQHSPWQFSNMNPASNIQQFDIGYQNTNSMLSPAYVPHGCVFSVNTPTPF 60

Query: 84  PGVYTN----KSGQMMPLLFPSHKPPELVGS 4
           PG+ T+    ++  ++P LFPS + PE  GS
Sbjct: 61  PGINTDNPFQQTSSLIPPLFPSCRHPEFDGS 91


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