BLASTX nr result
ID: Cheilocostus21_contig00016178
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00016178
(856 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OWF55176.1| DNA repair protein RAD50 [Mizuhopecten yessoensis] 45 1e-07
gb|OWF46826.1| DNA repair protein RAD50 [Mizuhopecten yessoensis] 49 7e-07
gb|OWF55178.1| DNA repair protein RAD50 [Mizuhopecten yessoensis] 49 2e-06
>gb|OWF55176.1| DNA repair protein RAD50 [Mizuhopecten yessoensis]
Length = 141
Score = 45.4 bits (106), Expect(2) = 1e-07
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD ++S+Y T ++YD +VS+YD I ++Y + IYD ++ D +
Sbjct: 9 YDTVVSMYDTVVSMYGTVVNMYDTVVSMYDAIVSMYDTVVIIYDTVVSMDDTV 61
Score = 40.0 bits (92), Expect(2) = 1e-07
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 156 NIGSSYDILVSIYETKGSIYDNLVSIYDII 245
N+ S YD +VSIY+T S+YDN+VS+YD +
Sbjct: 67 NVVSMYDTVVSIYDTVVSMYDNVVSMYDTV 96
>gb|OWF46826.1| DNA repair protein RAD50 [Mizuhopecten yessoensis]
Length = 719
Score = 47.8 bits (112), Expect(2) = 7e-07
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 219 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 271
Score = 34.7 bits (78), Expect(2) = 7e-07
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD L S+Y+T S+YD + S+YD +
Sbjct: 306 VASMYDTLASMYDTLASMYDTVASMYDTV 334
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 226 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 278
Score = 34.3 bits (77), Expect(2) = 9e-07
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD L S+Y+T S+YD + S+YD +
Sbjct: 313 LASMYDTLASMYDTVASMYDTVASMYDTV 341
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD L S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 408 YDTVASMYDTLASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 460
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD L S+Y T S+YD + S+YD +
Sbjct: 495 VASMYDTLASMYVTVASMYDTVASMYDTL 523
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 44 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 96
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 135 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 187
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 240 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 292
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 338 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 390
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD + S+Y+T S+YD + S+YD +
Sbjct: 124 VASMYDTVASMYDTVASMYDTVASMYDTV 152
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD + S+Y+T S+YD + S+YD +
Sbjct: 222 VASMYDTVASMYDTVASMYDTVASMYDTV 250
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD + S+Y+T S+YD + S+YD +
Sbjct: 327 VASMYDTVASMYDTVASMYDTVASMYDTV 355
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD + S+Y+T S+YD + S+YD +
Sbjct: 425 VASMYDTVASMYDTVASMYDTVASMYDTV 453
Score = 47.8 bits (112), Expect(2) = 2e-06
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD + S+Y+T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 233 YDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTVASMYDTV 285
Score = 33.1 bits (74), Expect(2) = 2e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD + S+Y+T S+YD + S+YD +
Sbjct: 320 LASMYDTVASMYDTVASMYDTVASMYDTV 348
Score = 46.6 bits (109), Expect(2) = 2e-06
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD L S+Y T S+YD L S+YD + ++Y + ++YD + +D +
Sbjct: 548 YDTVASMYDTLASMYVTVASMYDTLASMYDTLASMYVTVASMYDTLASMYDTL 600
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDIIGYL 254
+ S YD L S+Y T S+YD L S+YD + +
Sbjct: 635 LASMYDTLASMYVTVASMYDTLASMYDTLAIM 666
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD L S+Y T S+YD L S+YD + ++Y + ++YD + +D +
Sbjct: 569 YDTLASMYDTLASMYVTVASMYDTLASMYDTLASMYVTVASMYDTLASMYDTL 621
Score = 45.8 bits (107), Expect(2) = 4e-06
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + S+YD L S+Y T S+YD + S+YD + ++Y + ++YD + +D +
Sbjct: 471 YDTVASMYDTLASMYVTVASMYDTVASMYDTLASMYVTVASMYDTVASMYDTL 523
Score = 33.9 bits (76), Expect(2) = 4e-06
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD L S+Y T S+YD L S+YD +
Sbjct: 551 VASMYDTLASMYVTVASMYDTLASMYDTL 579
Score = 33.5 bits (75), Expect(2) = 4e-06
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+ S YD L S+Y T S+YD L S+YD +
Sbjct: 614 LASMYDTLASMYVTVASMYDTLASMYDTL 642
>gb|OWF55178.1| DNA repair protein RAD50 [Mizuhopecten yessoensis]
Length = 120
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 17/53 (32%), Positives = 38/53 (71%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + +YD ++S+Y+T S+YD++VS+YD + ++Y + ++YD +++ +D +
Sbjct: 16 YETVVRMYDTVVSMYDTVVSMYDVVVSMYDAVVSMYDAVGSMYDTVVRMYDAV 68
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = +1
Query: 1 YHDIWSIYDILISIYETKGSIYDILVSIYDIIGTIYHNIRTIYDIILQYHDII 159
Y + IYD ++S+YET +YD +VS+YD + ++Y + ++YD ++ +D +
Sbjct: 2 YDTVVRIYDTVVSLYETVVRMYDTVVSMYDTVVSMYDVVVSMYDAVVSMYDAV 54
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 159 IGSSYDILVSIYETKGSIYDNLVSIYDII 245
+GS YD +V +Y+ S+YD +VSIYD +
Sbjct: 54 VGSMYDTVVRMYDAVVSMYDTVVSIYDAV 82
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 171 YDILVSIYETKGSIYDNLVSIYD 239
YD +VS+Y+T SIYD +VS+YD
Sbjct: 65 YDAVVSMYDTVVSIYDAVVSMYD 87