BLASTX nr result
ID: Cheilocostus21_contig00016090
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00016090
(1456 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage fact... 369 e-114
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact... 369 e-114
ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage fact... 314 8e-95
ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage fact... 314 1e-93
ref|XP_009404994.1| PREDICTED: polyadenylation and cleavage fact... 287 1e-83
ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage fact... 286 3e-83
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 243 3e-67
ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage fact... 238 2e-65
ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage fact... 238 3e-65
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 232 3e-63
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact... 231 5e-63
gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus] 201 1e-52
ref|XP_020103161.1| polyadenylation and cleavage factor homolog ... 201 2e-52
gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus... 184 1e-46
ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein... 184 1e-46
ref|XP_015695514.1| PREDICTED: polyadenylation and cleavage fact... 161 6e-39
ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage fact... 153 3e-36
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact... 153 4e-36
ref|XP_020674647.1| polyadenylation and cleavage factor homolog ... 152 7e-36
ref|XP_020674645.1| polyadenylation and cleavage factor homolog ... 152 7e-36
>ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 1000
Score = 369 bits (947), Expect = e-114
Identities = 216/452 (47%), Positives = 274/452 (60%), Gaps = 17/452 (3%)
Frame = +1
Query: 151 IPHQRLSSTS-QINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSG 327
+PH R+SS Q K +AQY+EYD+DQP+L PQ G+ + + S+I + G
Sbjct: 232 MPHARVSSGGLQAYGQKPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARG 291
Query: 328 PIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTT-PGRASSSHPGSAYAPGRVGN 504
+P+ + K VRS +GTS GRAS+SH GS + PGR+ +
Sbjct: 292 SVPYLKNKISVPLSPRRIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSD 351
Query: 505 GNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPEN--SSFEKFAKAQR 678
NGWL + NEDPQ EA TLY LN G G++HPRDLIDAYGNP SS+EKF+K QR
Sbjct: 352 PNGWLGRSWPSNEDPQHVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQR 411
Query: 679 LDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSP 858
LD NG S AAA +W+NSDEEEY WEDMSPTL+DRS+RNS+P GPSAGS ++TGFS P
Sbjct: 412 LDVNGIASEAAARKWKNSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRP 471
Query: 859 GPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLMMKSLDGPSVHSESLSR 1038
P+++ESDF R SWPG+AQL AD S +VEDRI + GS+ MMK LDG + S+
Sbjct: 472 DPAVLESDFGRRSWPGQAQLHAADNPSFMVEDRIAARGSRSASMMKYLDG------TTSQ 525
Query: 1039 PDTGK-SYMLRQSTQQNLSSRSQRRAAQMLPATR-----------VLNDNSIDMDLTRRS 1182
D GK SY+ Q T ++LS RS+ R QM A + + +D S D+DL
Sbjct: 526 SDIGKLSYLFPQPTHKSLSPRSRSRVTQMPVAAKEMTSAAVQRLPIPHDYSPDIDLPHHR 585
Query: 1183 LSNARADSLKMVSSMMDRNSTQRHPATLLPVHISQSLSLRSVPPTQSPIRTL-DASEPNK 1359
LSNA AD LKM S +S+ P L +H SQ L S+P TQ PI + D S K
Sbjct: 586 LSNAHADPLKMDMSTQRPHSSA--PVILPSIHKSQPRPLLSIPQTQKPISSSPDVSLATK 643
Query: 1360 PTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
IQG+H FVPEQQY++ D+K+ DSV LL
Sbjct: 644 SIAIQGSHPTRFVPEQQYDIADRKNKDSVKLL 675
>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 1039
Score = 369 bits (947), Expect = e-114
Identities = 216/452 (47%), Positives = 274/452 (60%), Gaps = 17/452 (3%)
Frame = +1
Query: 151 IPHQRLSSTS-QINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSG 327
+PH R+SS Q K +AQY+EYD+DQP+L PQ G+ + + S+I + G
Sbjct: 271 MPHARVSSGGLQAYGQKPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARG 330
Query: 328 PIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTT-PGRASSSHPGSAYAPGRVGN 504
+P+ + K VRS +GTS GRAS+SH GS + PGR+ +
Sbjct: 331 SVPYLKNKISVPLSPRRIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSD 390
Query: 505 GNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPEN--SSFEKFAKAQR 678
NGWL + NEDPQ EA TLY LN G G++HPRDLIDAYGNP SS+EKF+K QR
Sbjct: 391 PNGWLGRSWPSNEDPQHVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQR 450
Query: 679 LDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSP 858
LD NG S AAA +W+NSDEEEY WEDMSPTL+DRS+RNS+P GPSAGS ++TGFS P
Sbjct: 451 LDVNGIASEAAARKWKNSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRP 510
Query: 859 GPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLMMKSLDGPSVHSESLSR 1038
P+++ESDF R SWPG+AQL AD S +VEDRI + GS+ MMK LDG + S+
Sbjct: 511 DPAVLESDFGRRSWPGQAQLHAADNPSFMVEDRIAARGSRSASMMKYLDG------TTSQ 564
Query: 1039 PDTGK-SYMLRQSTQQNLSSRSQRRAAQMLPATR-----------VLNDNSIDMDLTRRS 1182
D GK SY+ Q T ++LS RS+ R QM A + + +D S D+DL
Sbjct: 565 SDIGKLSYLFPQPTHKSLSPRSRSRVTQMPVAAKEMTSAAVQRLPIPHDYSPDIDLPHHR 624
Query: 1183 LSNARADSLKMVSSMMDRNSTQRHPATLLPVHISQSLSLRSVPPTQSPIRTL-DASEPNK 1359
LSNA AD LKM S +S+ P L +H SQ L S+P TQ PI + D S K
Sbjct: 625 LSNAHADPLKMDMSTQRPHSSA--PVILPSIHKSQPRPLLSIPQTQKPISSSPDVSLATK 682
Query: 1360 PTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
IQG+H FVPEQQY++ D+K+ DSV LL
Sbjct: 683 SIAIQGSHPTRFVPEQQYDIADRKNKDSVKLL 714
>ref|XP_018683567.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X4 [Musa acuminata subsp. malaccensis]
Length = 838
Score = 314 bits (805), Expect = 8e-95
Identities = 198/461 (42%), Positives = 256/461 (55%), Gaps = 26/461 (5%)
Frame = +1
Query: 151 IPHQRLSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSGP 330
IPH +SS+ + K + QY+E D D P+L PQ T G+G + V S IG+ G
Sbjct: 74 IPHTSVSSSLHVYEQKPSKQYSESDFDLPELLPQDLGTSGAGPPQTAMVHVSSAIGAGGS 133
Query: 331 IPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTT-PGRASSSHPGSAYAPGRVGNG 507
+P + K +R +G S G AS SH G Y PGRV +
Sbjct: 134 MPHLKNKISLSSSPPRIGVRRHVSPPNMRFYNGISARKIGGMASPSHSGFVYGPGRVSDP 193
Query: 508 NGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPEN--SSFEKFAKAQRL 681
N D+ R NEDP E +N GYG++HPRDLIDAYGNP SS+EKF K QRL
Sbjct: 194 NSRADRSRPSNEDPYHVEVSMQHNHKYGYGKQHPRDLIDAYGNPRGRVSSYEKFPKVQRL 253
Query: 682 DGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSPG 861
D NG S AA +W+NSDEEEY WE MSPTLAD+S+RNS+PPFGPS+GS + +TG S
Sbjct: 254 DVNGIASEAATRKWKNSDEEEYVWESMSPTLADQSRRNSLPPFGPSSGSISNRTGISISN 313
Query: 862 PSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLMMKSLDGPS------VHS 1023
P+++E+DF RHSWP + Q S P MMK LDG + H
Sbjct: 314 PAMLETDFQRHSWPVQTQ-------------------SHPGSMMKYLDGTTSQTGSPPHH 354
Query: 1024 ESLSRP-DTGK-SYMLRQSTQQNLSSRSQRRA----------AQMLPATRVLNDNSIDMD 1167
+ L+R D+GK S + QST+Q+LS RS+ A Q LP V +D+ D++
Sbjct: 355 QKLNRTRDSGKFSCLFPQSTRQSLSPRSRSTALALGGVAPSIGQKLP---VAHDSLPDIE 411
Query: 1168 LTRRSLSNARADSLKMVSSMMDRNSTQR---HPATLLP-VHISQSLSLRSVPPTQSPIR- 1332
L RSLSNA D LK+ ++++DR ST R P +LP H SQSL S+PP Q +
Sbjct: 412 LPLRSLSNAHDDPLKINTAVIDRQSTLRPYSPPQDMLPSAHKSQSLPCLSIPPNQKLVNG 471
Query: 1333 TLDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
LD SEPNK + QG IFVPE+QY++ DK S+SV +
Sbjct: 472 QLDISEPNKLLMNQGADPRIFVPEKQYDIVDKYSSESVKFI 512
>ref|XP_009404992.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 991
Score = 314 bits (805), Expect = 1e-93
Identities = 198/461 (42%), Positives = 256/461 (55%), Gaps = 26/461 (5%)
Frame = +1
Query: 151 IPHQRLSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSGP 330
IPH +SS+ + K + QY+E D D P+L PQ T G+G + V S IG+ G
Sbjct: 227 IPHTSVSSSLHVYEQKPSKQYSESDFDLPELLPQDLGTSGAGPPQTAMVHVSSAIGAGGS 286
Query: 331 IPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTT-PGRASSSHPGSAYAPGRVGNG 507
+P + K +R +G S G AS SH G Y PGRV +
Sbjct: 287 MPHLKNKISLSSSPPRIGVRRHVSPPNMRFYNGISARKIGGMASPSHSGFVYGPGRVSDP 346
Query: 508 NGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPEN--SSFEKFAKAQRL 681
N D+ R NEDP E +N GYG++HPRDLIDAYGNP SS+EKF K QRL
Sbjct: 347 NSRADRSRPSNEDPYHVEVSMQHNHKYGYGKQHPRDLIDAYGNPRGRVSSYEKFPKVQRL 406
Query: 682 DGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSPG 861
D NG S AA +W+NSDEEEY WE MSPTLAD+S+RNS+PPFGPS+GS + +TG S
Sbjct: 407 DVNGIASEAATRKWKNSDEEEYVWESMSPTLADQSRRNSLPPFGPSSGSISNRTGISISN 466
Query: 862 PSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLMMKSLDGPS------VHS 1023
P+++E+DF RHSWP + Q S P MMK LDG + H
Sbjct: 467 PAMLETDFQRHSWPVQTQ-------------------SHPGSMMKYLDGTTSQTGSPPHH 507
Query: 1024 ESLSRP-DTGK-SYMLRQSTQQNLSSRSQRRA----------AQMLPATRVLNDNSIDMD 1167
+ L+R D+GK S + QST+Q+LS RS+ A Q LP V +D+ D++
Sbjct: 508 QKLNRTRDSGKFSCLFPQSTRQSLSPRSRSTALALGGVAPSIGQKLP---VAHDSLPDIE 564
Query: 1168 LTRRSLSNARADSLKMVSSMMDRNSTQR---HPATLLP-VHISQSLSLRSVPPTQSPIR- 1332
L RSLSNA D LK+ ++++DR ST R P +LP H SQSL S+PP Q +
Sbjct: 565 LPLRSLSNAHDDPLKINTAVIDRQSTLRPYSPPQDMLPSAHKSQSLPCLSIPPNQKLVNG 624
Query: 1333 TLDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
LD SEPNK + QG IFVPE+QY++ DK S+SV +
Sbjct: 625 QLDISEPNKLLMNQGADPRIFVPEKQYDIVDKYSSESVKFI 665
>ref|XP_009404994.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 287 bits (734), Expect = 1e-83
Identities = 190/460 (41%), Positives = 246/460 (53%), Gaps = 25/460 (5%)
Frame = +1
Query: 151 IPHQRLSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSGP 330
IPH +SS+ + K + QY+E D D P+L PQ T G+G + V S IG+ G
Sbjct: 227 IPHTSVSSSLHVYEQKPSKQYSESDFDLPELLPQDLGTSGAGPPQTAMVHVSSAIGAGGS 286
Query: 331 IPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTTPGRASSSHPGSAYAPGRVGNGN 510
+P + K SSS P RV + N
Sbjct: 287 MPHLKNKISL--------------------------------SSSPPRIGVR--RVSDPN 312
Query: 511 GWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPEN--SSFEKFAKAQRLD 684
D+ R NEDP E +N GYG++HPRDLIDAYGNP SS+EKF K QRLD
Sbjct: 313 SRADRSRPSNEDPYHVEVSMQHNHKYGYGKQHPRDLIDAYGNPRGRVSSYEKFPKVQRLD 372
Query: 685 GNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSPGP 864
NG S AA +W+NSDEEEY WE MSPTLAD+S+RNS+PPFGPS+GS + +TG S P
Sbjct: 373 VNGIASEAATRKWKNSDEEEYVWESMSPTLADQSRRNSLPPFGPSSGSISNRTGISISNP 432
Query: 865 SLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLMMKSLDGPS------VHSE 1026
+++E+DF RHSWP + Q S P MMK LDG + H +
Sbjct: 433 AMLETDFQRHSWPVQTQ-------------------SHPGSMMKYLDGTTSQTGSPPHHQ 473
Query: 1027 SLSRP-DTGK-SYMLRQSTQQNLSSRSQRRA----------AQMLPATRVLNDNSIDMDL 1170
L+R D+GK S + QST+Q+LS RS+ A Q LP V +D+ D++L
Sbjct: 474 KLNRTRDSGKFSCLFPQSTRQSLSPRSRSTALALGGVAPSIGQKLP---VAHDSLPDIEL 530
Query: 1171 TRRSLSNARADSLKMVSSMMDRNSTQR---HPATLLP-VHISQSLSLRSVPPTQSPIR-T 1335
RSLSNA D LK+ ++++DR ST R P +LP H SQSL S+PP Q +
Sbjct: 531 PLRSLSNAHDDPLKINTAVIDRQSTLRPYSPPQDMLPSAHKSQSLPCLSIPPNQKLVNGQ 590
Query: 1336 LDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
LD SEPNK + QG IFVPE+QY++ DK S+SV +
Sbjct: 591 LDISEPNKLLMNQGADPRIFVPEKQYDIVDKYSSESVKFI 630
>ref|XP_009404993.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 956
Score = 286 bits (731), Expect = 3e-83
Identities = 183/424 (43%), Positives = 235/424 (55%), Gaps = 26/424 (6%)
Frame = +1
Query: 262 TVGSGARRNNRVGAGSVIGSSGPIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTT 441
T G+G + V S IG+ G +P + K +R +G S
Sbjct: 229 TSGAGPPQTAMVHVSSAIGAGGSMPHLKNKISLSSSPPRIGVRRHVSPPNMRFYNGISAR 288
Query: 442 T-PGRASSSHPGSAYAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDL 618
G AS SH G Y PGRV + N D+ R NEDP E +N GYG++HPRDL
Sbjct: 289 KIGGMASPSHSGFVYGPGRVSDPNSRADRSRPSNEDPYHVEVSMQHNHKYGYGKQHPRDL 348
Query: 619 IDAYGNPEN--SSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKR 792
IDAYGNP SS+EKF K QRLD NG S AA +W+NSDEEEY WE MSPTLAD+S+R
Sbjct: 349 IDAYGNPRGRVSSYEKFPKVQRLDVNGIASEAATRKWKNSDEEEYVWESMSPTLADQSRR 408
Query: 793 NSIPPFGPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHG 972
NS+PPFGPS+GS + +TG S P+++E+DF RHSWP + Q
Sbjct: 409 NSLPPFGPSSGSISNRTGISISNPAMLETDFQRHSWPVQTQ------------------- 449
Query: 973 SQPRLMMKSLDGPS------VHSESLSRP-DTGK-SYMLRQSTQQNLSSRSQRRA----- 1113
S P MMK LDG + H + L+R D+GK S + QST+Q+LS RS+ A
Sbjct: 450 SHPGSMMKYLDGTTSQTGSPPHHQKLNRTRDSGKFSCLFPQSTRQSLSPRSRSTALALGG 509
Query: 1114 -----AQMLPATRVLNDNSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQR---HPATLL 1269
Q LP V +D+ D++L RSLSNA D LK+ ++++DR ST R P +L
Sbjct: 510 VAPSIGQKLP---VAHDSLPDIELPLRSLSNAHDDPLKINTAVIDRQSTLRPYSPPQDML 566
Query: 1270 P-VHISQSLSLRSVPPTQSPIR-TLDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDS 1443
P H SQSL S+PP Q + LD SEPNK + QG IFVPE+QY++ DK S+S
Sbjct: 567 PSAHKSQSLPCLSIPPNQKLVNGQLDISEPNKLLMNQGADPRIFVPEKQYDIVDKYSSES 626
Query: 1444 VDLL 1455
V +
Sbjct: 627 VKFI 630
>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 243 bits (621), Expect = 3e-67
Identities = 171/469 (36%), Positives = 237/469 (50%), Gaps = 34/469 (7%)
Frame = +1
Query: 151 IPHQR-LSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSG 327
I H R +SS+ Q+ K + Q NEYDID P++ P V +G+ A S++ G
Sbjct: 282 IEHARGVSSSLQVYGQKSSLQCNEYDIDHPEVLPSRRGIVRTGSPLTAATRATSIVEVEG 341
Query: 328 PIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTTPGRASSSHPGSAYAPGRVGNG 507
P + K R + TS P R S GR N
Sbjct: 342 PTRHSKSKFSRFSPPPIIGPRKSVSPPTDRFSRRTS---PRRVLKRTSPSHSEAGRGTNQ 398
Query: 508 NGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGN--PENSSFEKFAKAQRL 681
NG ++ ++ + ++ ++LN GY ++H RDLIDAYGN +++S EK K QRL
Sbjct: 399 NGRFERSWPCDDATEQVKSSMAFSLNSGYAKQHSRDLIDAYGNCRGKSTSLEKLPKVQRL 458
Query: 682 DGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSPG 861
D NG S AA +W+NS+EEEY WEDMSPTL+DRS+R S PP GPS G+ +++ G + P
Sbjct: 459 DVNGIASEAATRKWKNSEEEEYVWEDMSPTLSDRSRRKSQPPLGPSTGNLSIRGGLTRPD 518
Query: 862 PSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI----VSHGSQPRLMMKSLDGPSVHSES 1029
SL+E DF RHSWPG+AQL D + VEDRI +HGS R K LDG V+
Sbjct: 519 ASLLEHDFGRHSWPGQAQLPAIDDPAYTVEDRIHFFGNAHGSMNR---KYLDG-IVNQHK 574
Query: 1030 LSRPDTGK---------SYMLRQSTQQNLSSRSQRRAAQMLPATR-----------VLND 1149
L G YM QS+QQ+LS R + RA+QM A L +
Sbjct: 575 LLADSQGSHHTHEPRKLPYMFPQSSQQSLSPRLRGRASQMPVAASGITPSIGNKLPNLYE 634
Query: 1150 NSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQR------HPATLLPVHISQSLSLRSVP 1311
N+ DM++ ++LS++ +D + +S ++R QR P PVH SQ L L VP
Sbjct: 635 NTPDMEVAFQTLSSSHSDPFNVDTSTLERYLPQRPHSPPHAPTVWPPVHKSQPLPLLPVP 694
Query: 1312 PTQSPIRT-LDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
P Q ++ D E NKP L QG + + Q + D+K+ +S LL
Sbjct: 695 PNQKQCKSPFDFLEANKPLLNQGPESSFYFSQHQNDTADRKNLNSNKLL 743
>ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Phoenix dactylifera]
Length = 977
Score = 238 bits (606), Expect = 2e-65
Identities = 160/466 (34%), Positives = 233/466 (50%), Gaps = 31/466 (6%)
Frame = +1
Query: 151 IPHQR-LSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSG 327
I H R +SS+ Q+ K + Q +EY+ID P++ P +G+ + S++ G
Sbjct: 199 IEHVRGVSSSLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEG 258
Query: 328 PIPFPEEKXXXXXXXXXXXXXXXXXXXXVR-SADGTSTTTPGRASSSHPGSAYAPGRVGN 504
P + K R S D + RAS SH G Y PGR +
Sbjct: 259 PTRQLKIKISRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTS 318
Query: 505 GNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPENSSF--EKFAKAQR 678
NGWL++RR ++ Q +A +NLN GY ++ R+LIDAYGN SF EK K R
Sbjct: 319 QNGWLERRRPFDDGAQQIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPR 378
Query: 679 LDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSP 858
LD N S A+ +W+NS+EEEY WEDMSPTL+DRS+RNS+PPFGPS GS + + G + P
Sbjct: 379 LDVNSVASERASRKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRP 438
Query: 859 GPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI----VSHGSQPRLMMKSLDG-----P 1011
SL++ D R SWPG+AQL + +EDRI +HGS R + S P
Sbjct: 439 DASLLDHDSGRRSWPGQAQLPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWLP 498
Query: 1012 SVHSESLSRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPATRVLN-----------DNSI 1158
+ YM +S+Q NLS RS+RRA QM A + +++
Sbjct: 499 PYQGSHHTHEPRKLPYMFPKSSQHNLSPRSRRRAHQMPVAASGITSLVSNKLPSPYEHTT 558
Query: 1159 DMDLTRRSLSNARADSLKMVSSMMDRNSTQR------HPATLLPVHISQSLSLRSVPPTQ 1320
DM++ LS++ +D + +S ++R+ QR P VH +Q L L +PP Q
Sbjct: 559 DMEVPFSRLSSSHSDPFDVDTSTLERHLAQRPHSPPPPPIVRPSVHNNQQLPLLPIPPNQ 618
Query: 1321 SPIRT-LDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
+++ D E +KP Q +++ + Q + D+K +S LL
Sbjct: 619 KQLKSPFDDVEAHKPIPNQRPESFLYLSQYQNDTADRKTLNSNKLL 664
>ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
ref|XP_008808981.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
ref|XP_008808982.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
ref|XP_008808983.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera]
Length = 1065
Score = 238 bits (606), Expect = 3e-65
Identities = 160/466 (34%), Positives = 233/466 (50%), Gaps = 31/466 (6%)
Frame = +1
Query: 151 IPHQR-LSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSG 327
I H R +SS+ Q+ K + Q +EY+ID P++ P +G+ + S++ G
Sbjct: 287 IEHVRGVSSSLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEG 346
Query: 328 PIPFPEEKXXXXXXXXXXXXXXXXXXXXVR-SADGTSTTTPGRASSSHPGSAYAPGRVGN 504
P + K R S D + RAS SH G Y PGR +
Sbjct: 347 PTRQLKIKISRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTS 406
Query: 505 GNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPENSSF--EKFAKAQR 678
NGWL++RR ++ Q +A +NLN GY ++ R+LIDAYGN SF EK K R
Sbjct: 407 QNGWLERRRPFDDGAQQIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPR 466
Query: 679 LDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSP 858
LD N S A+ +W+NS+EEEY WEDMSPTL+DRS+RNS+PPFGPS GS + + G + P
Sbjct: 467 LDVNSVASERASRKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRP 526
Query: 859 GPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI----VSHGSQPRLMMKSLDG-----P 1011
SL++ D R SWPG+AQL + +EDRI +HGS R + S P
Sbjct: 527 DASLLDHDSGRRSWPGQAQLPAVGDPANTIEDRIPVFGPAHGSMNRKYLDSTVSQNDWLP 586
Query: 1012 SVHSESLSRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPATRVLN-----------DNSI 1158
+ YM +S+Q NLS RS+RRA QM A + +++
Sbjct: 587 PYQGSHHTHEPRKLPYMFPKSSQHNLSPRSRRRAHQMPVAASGITSLVSNKLPSPYEHTT 646
Query: 1159 DMDLTRRSLSNARADSLKMVSSMMDRNSTQR------HPATLLPVHISQSLSLRSVPPTQ 1320
DM++ LS++ +D + +S ++R+ QR P VH +Q L L +PP Q
Sbjct: 647 DMEVPFSRLSSSHSDPFDVDTSTLERHLAQRPHSPPPPPIVRPSVHNNQQLPLLPIPPNQ 706
Query: 1321 SPIRT-LDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
+++ D E +KP Q +++ + Q + D+K +S LL
Sbjct: 707 KQLKSPFDDVEAHKPIPNQRPESFLYLSQYQNDTADRKTLNSNKLL 752
>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Phoenix dactylifera]
Length = 1063
Score = 232 bits (592), Expect = 3e-63
Identities = 164/466 (35%), Positives = 241/466 (51%), Gaps = 31/466 (6%)
Frame = +1
Query: 151 IPHQR-LSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSVIGSSG 327
I H R +SS+ Q+ K + Q N+YDID P+++P + +G+ A S++ G
Sbjct: 282 IEHARGVSSSLQVYGRKSSMQCNKYDIDNPEVRPSRRGILRAGSPHTAATQASSMVEVEG 341
Query: 328 PIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTTP-GRASSSHPGSAYAPGRVGN 504
P + K R + TS RAS SH G+ GR N
Sbjct: 342 PTHHSKSKFSRFSPPPIIGPRKSILPLTDRFSRNTSPRRVLERASPSHSGA----GRGTN 397
Query: 505 GNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPE--NSSFEKFAKAQR 678
N W ++ ++ Q ++ +NLN GY KH R+LIDAYGN ++S EK K QR
Sbjct: 398 QNSWFERIWPFDDVTQQVKSSMAFNLNNGYAEKHSRELIDAYGNCSGTSTSLEKLPKVQR 457
Query: 679 LDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFNVQTGFSSP 858
LD NG S AA +W+NS+EEEY WEDMSPTL+DRS+RNS PP G S GS +++ G + P
Sbjct: 458 LDVNGLASEAANIKWKNSEEEEYVWEDMSPTLSDRSRRNSQPPLGRSTGSLSIRGGLTRP 517
Query: 859 GPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI----VSHGSQPRLMMKSLDGPS---V 1017
SL+E DF RHSWPG+AQ D + VEDRI +HGS+ R + S+ + +
Sbjct: 518 DASLLEHDFGRHSWPGQAQ--AVDDPAYTVEDRIPLFGSAHGSRNRKNLDSIVNQNKLLL 575
Query: 1018 HSESL--SRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPATR-----------VLNDNSI 1158
HS+ +R Y+L QS+QQ+LS +++ RA QM A L +N+
Sbjct: 576 HSQGSHHTREPRKLPYVLPQSSQQSLSPQARGRAPQMPVAASGITPPIGNKLPNLYENTP 635
Query: 1159 DMDLTRRSLSNARADSLKMVSSMMD------RNSTQRHPATLLPVHISQSLSLRSVPPTQ 1320
DM++ + LS++ ++ + +S ++ +S P PVH S++L L + P Q
Sbjct: 636 DMEVAFQELSSSHSNPFNVDTSTLEIYLPQIPHSPPPAPIIWPPVHKSEALPLLPILPNQ 695
Query: 1321 SPIRT-LDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
++ D E +KP L QG + + Q + D K+S+S LL
Sbjct: 696 KQFKSPFDFLEASKPLLNQGLESSFYFSQHQDDTADTKNSNSNKLL 741
>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like [Elaeis
guineensis]
Length = 1053
Score = 231 bits (590), Expect = 5e-63
Identities = 162/480 (33%), Positives = 238/480 (49%), Gaps = 39/480 (8%)
Frame = +1
Query: 133 LNPKKVIPHQRLSSTSQINAH---------KQTAQYNEYDIDQPKLQPQSFVTVGSGARR 285
+NPK + Q+L ++ H K + Q NEY ID P++ P +G+ +
Sbjct: 247 VNPKYLEARQQLKHSTSDTEHVRGVSSSGQKSSMQCNEYSIDHPEVLPPRPGAARTGSPQ 306
Query: 286 NNRVGAGSVIGSSGPIPFPEEKXXXXXXXXXXXXXXXXXXXXVR-SADGTSTTTPGRASS 462
S++ GP + K R S D + R S
Sbjct: 307 TAATCTTSMVEVEGPTRQLKIKISRSSPPPIIGPRNSISPPIDRFSRDTSPRRMLERVSP 366
Query: 463 SHPGSAYAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGN-- 636
SH G Y PGR N NGWL++R ++ Q +A +NLN GY ++ R+LIDAYGN
Sbjct: 367 SHSGFVYGPGRGTNQNGWLERRWPFDDSAQKIQASMAFNLNNGYAKQRSRELIDAYGNYT 426
Query: 637 PENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGP 816
+++S EK K QR+D N S AA +W+NS+EEEY WEDMSPTL+DRS+RNS+PPFGP
Sbjct: 427 GKSASLEKLPKVQRVDVNSVASERAARKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGP 486
Query: 817 SAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI----VSHGSQPR 984
S + + G + P SL++ D R SWPG+AQL S+ +EDRI +HGS R
Sbjct: 487 SLPPLSTRAGLTRPDASLLDHDSGRRSWPGQAQLPAVGDSAFTIEDRIPVFGSAHGSMNR 546
Query: 985 LMMKSLDG-----PSVHSESLSRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPATR---- 1137
+ S P +M +S Q +LS +S+ RA QM A
Sbjct: 547 KYLDSTVSQNDWLPHYQGSQHMHQPRKLPFMFPKSAQHSLSPQSRGRAHQMPVAASGITP 606
Query: 1138 -VLN------DNSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQR----HPATLL--PVH 1278
V+N +++ D+++ + LS++ +D + +S ++R+ TQR PA ++ PVH
Sbjct: 607 LVINKLPSPYEHTTDLEVPFQRLSSSHSDPFDVDTSTLERHLTQRPHSPPPAPIIWPPVH 666
Query: 1279 ISQSLSLRSVPPTQSPIR-TLDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDLL 1455
+Q L L +PP Q + + D E NKP L Q + + Q + D+K S+S LL
Sbjct: 667 NTQQLPLLPIPPNQKQFKSSFDHVEANKPILNQRPESFFNLSQYQNDTADRKISNSNKLL 726
>gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus]
Length = 860
Score = 201 bits (510), Expect = 1e-52
Identities = 129/345 (37%), Positives = 176/345 (51%), Gaps = 21/345 (6%)
Frame = +1
Query: 451 RASSSHPGSAYAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAY 630
R S S G Y GRV + NG + P EA Y LN G+G+++ R+LIDAY
Sbjct: 334 RPSPSRTGFGYGRGRVADQNGIFEM---------PSEASKAYKLNNGFGKQNARELIDAY 384
Query: 631 GNPENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPF 810
GN EK K QRLD NG V A A +W+ SDEEEY WEDMSPTLADRS+RNS+PP
Sbjct: 385 GNYRGKD-EKLPKLQRLDTNGNVGEATAIKWKTSDEEEYVWEDMSPTLADRSRRNSLPPI 443
Query: 811 GPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLM 990
GPS+G + GFS P +M +DF+RHSWPG+ QL D VEDR+ GS +
Sbjct: 444 GPSSGMLSSGPGFSRPNAGIMNTDFVRHSWPGQGQLAAIDDPVLNVEDRLPVAGSGHEVN 503
Query: 991 MKSLDGPSVHSESL---------SRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPA---- 1131
K H+ES S+ + +MLR ++QQ+L S+ A QM
Sbjct: 504 KKYPQSARHHNESFSYYQSSSYHSQEPSKLPHMLRPTSQQSLDPLSRVPAPQMASGLSRV 563
Query: 1132 ----TRVLN---DNSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQRHPATLLPVHISQS 1290
T+ L D +D ++ + S A +D +S P PV S+
Sbjct: 564 APSITQKLTIPYDTPLDNEVPFQRSSTAYSDQPNEKQLAQRAHSPIPGPLEWPPVRKSEM 623
Query: 1291 LSLRSVPPTQSPIRT-LDASEPNKPTLIQGTHQPIFVPEQQYNVT 1422
L S+PP + ++ D E N+ ++ QG + + +P+QQYN +
Sbjct: 624 QLLPSIPPNLNHFKSAADFLETNRTSVNQGPNPSLILPQQQYNTS 668
>ref|XP_020103161.1| polyadenylation and cleavage factor homolog 4-like [Ananas comosus]
Length = 999
Score = 201 bits (510), Expect = 2e-52
Identities = 129/345 (37%), Positives = 176/345 (51%), Gaps = 21/345 (6%)
Frame = +1
Query: 451 RASSSHPGSAYAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAY 630
R S S G Y GRV + NG + P EA Y LN G+G+++ R+LIDAY
Sbjct: 334 RPSPSRTGFGYGRGRVADQNGIFEM---------PSEASKAYKLNNGFGKQNARELIDAY 384
Query: 631 GNPENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPF 810
GN EK K QRLD NG V A A +W+ SDEEEY WEDMSPTLADRS+RNS+PP
Sbjct: 385 GNYRGKD-EKLPKLQRLDTNGNVGEATAIKWKTSDEEEYVWEDMSPTLADRSRRNSLPPI 443
Query: 811 GPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQPRLM 990
GPS+G + GFS P +M +DF+RHSWPG+ QL D VEDR+ GS +
Sbjct: 444 GPSSGMLSSGPGFSRPNAGIMNTDFVRHSWPGQGQLAAIDDPVLNVEDRLPVAGSGHEVN 503
Query: 991 MKSLDGPSVHSESL---------SRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPA---- 1131
K H+ES S+ + +MLR ++QQ+L S+ A QM
Sbjct: 504 KKYPQSARHHNESFSYYQSSSYHSQEPSKLPHMLRPTSQQSLDPLSRVPAPQMASGLSRV 563
Query: 1132 ----TRVLN---DNSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQRHPATLLPVHISQS 1290
T+ L D +D ++ + S A +D +S P PV S+
Sbjct: 564 APSITQKLTIPYDTPLDNEVPFQRSSTAYSDQPNEKQLAQRAHSPIPGPLEWPPVRKSEM 623
Query: 1291 LSLRSVPPTQSPIRT-LDASEPNKPTLIQGTHQPIFVPEQQYNVT 1422
L S+PP + ++ D E N+ ++ QG + + +P+QQYN +
Sbjct: 624 QLLPSIPPNLNHFKSAADFLETNRTSVNQGPNPSLILPQQQYNTS 668
>gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus officinalis]
Length = 1031
Score = 184 bits (468), Expect = 1e-46
Identities = 126/372 (33%), Positives = 182/372 (48%), Gaps = 31/372 (8%)
Frame = +1
Query: 418 SADGTSTTTPGRASSSHPGSAYAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYG 597
S DG+ RA+ H + PGR + NG L+ R L N EA Y+ N GY
Sbjct: 386 SRDGSPWAAAERATQPHSRLGFGPGRAVDQNGRLEGRWLANVGAPQLEASATYDPNAGYI 445
Query: 598 RKHPRDLIDAYGNP--ENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPT 771
+KHPR+LI+AYGNP +++S E +K QR + NG A WR+ +E+EY WEDMSPT
Sbjct: 446 KKHPRELINAYGNPSGKDTSLENISKIQRSNVNGISREVATKNWRSFEEDEYVWEDMSPT 505
Query: 772 LADRSKRNSIPPFGPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVE 951
L +RN++P GPS+GS N + G S P S++E DF ++W + D + +V
Sbjct: 506 LLANHRRNNLPQLGPSSGSLNRRIGLSRPDVSILEPDFRANNWCDQTTQNPVDDPAIVVN 565
Query: 952 DRI----VSHGSQPRLMMKSLDGPSVHSESLSRPDTGKSYMLR--------QSTQQNLSS 1095
DRI HGS P MKS D +E RP SY+ Q LSS
Sbjct: 566 DRIPVLRSGHGSMP---MKSSDSREAQNEQF-RPYHSSSYVHEPGKFPYSFQHASGELSS 621
Query: 1096 RSQRRAAQM-LPATRVLNDNS----------IDMDLTRRSLSNARADSLKMVSSMMDRN- 1239
+S+ ++ LP R+ DN ++++ + LSN + SL +SM+++
Sbjct: 622 KSRGWEPRIPLPIDRIAADNGQKLPIPYDSPPEVEVPHQKLSNVHSSSLNTEASMLEKRL 681
Query: 1240 -----STQRHPATLLPVHISQSLSLRSVPPTQSPIRTLDASEPNKPTLIQGTHQPIFVPE 1404
S P PVH SQ L L VPP Q + + + QG + IFVP
Sbjct: 682 ELRPFSPPTAPVLWPPVHKSQPLPLFPVPPYQKQFENTSSLMESSKPINQGLNPAIFVP- 740
Query: 1405 QQYNVTDKKHSD 1440
Q+ +D++ ++
Sbjct: 741 HQFESSDRRTAE 752
>ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109844760 [Asparagus
officinalis]
Length = 1407
Score = 184 bits (468), Expect = 1e-46
Identities = 126/372 (33%), Positives = 182/372 (48%), Gaps = 31/372 (8%)
Frame = +1
Query: 418 SADGTSTTTPGRASSSHPGSAYAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYG 597
S DG+ RA+ H + PGR + NG L+ R L N EA Y+ N GY
Sbjct: 730 SRDGSPWAAAERATQPHSRLGFGPGRAVDQNGRLEGRWLANVGAPQLEASATYDPNAGYI 789
Query: 598 RKHPRDLIDAYGNP--ENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPT 771
+KHPR+LI+AYGNP +++S E +K QR + NG A WR+ +E+EY WEDMSPT
Sbjct: 790 KKHPRELINAYGNPSGKDTSLENISKIQRSNVNGISREVATKNWRSFEEDEYVWEDMSPT 849
Query: 772 LADRSKRNSIPPFGPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVE 951
L +RN++P GPS+GS N + G S P S++E DF ++W + D + +V
Sbjct: 850 LLANHRRNNLPQLGPSSGSLNRRIGLSRPDVSILEPDFRANNWCDQTTQNPVDDPAIVVN 909
Query: 952 DRI----VSHGSQPRLMMKSLDGPSVHSESLSRPDTGKSYMLR--------QSTQQNLSS 1095
DRI HGS P MKS D +E RP SY+ Q LSS
Sbjct: 910 DRIPVLRSGHGSMP---MKSSDSREAQNEQF-RPYHSSSYVHEPGKFPYSFQHASGELSS 965
Query: 1096 RSQRRAAQM-LPATRVLNDNS----------IDMDLTRRSLSNARADSLKMVSSMMDRN- 1239
+S+ ++ LP R+ DN ++++ + LSN + SL +SM+++
Sbjct: 966 KSRGWEPRIPLPIDRIAADNGQKLPIPYDSPPEVEVPHQKLSNVHSSSLNTEASMLEKRL 1025
Query: 1240 -----STQRHPATLLPVHISQSLSLRSVPPTQSPIRTLDASEPNKPTLIQGTHQPIFVPE 1404
S P PVH SQ L L VPP Q + + + QG + IFVP
Sbjct: 1026 ELRPFSPPTAPVLWPPVHKSQPLPLFPVPPYQKQFENTSSLMESSKPINQGLNPAIFVP- 1084
Query: 1405 QQYNVTDKKHSD 1440
Q+ +D++ ++
Sbjct: 1085 HQFESSDRRTAE 1096
>ref|XP_015695514.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like,
partial [Oryza brachyantha]
Length = 913
Score = 161 bits (408), Expect = 6e-39
Identities = 119/349 (34%), Positives = 181/349 (51%), Gaps = 15/349 (4%)
Frame = +1
Query: 451 RASSSHPGSAYAPGRVGNGNGWLDQRRLPNED--PQPPEAYTLYNLNKGYGRKHPRDLID 624
R SH P R+ + NGW D R+ ED P+PP + L++ Y ++ R+LID
Sbjct: 260 RPPLSHSVLGPDPRRLPDRNGWFD-RKWAFEDGAPRPPMSI----LDEEYRKQSARELID 314
Query: 625 AYGNPENSSF-EKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSI 801
AYGN + E+ +K QRLD NG S + A +W S+EEEY WEDMSPTLADR+ R S+
Sbjct: 315 AYGNSQGKDVDERLSKMQRLDSNGMASRSTAQKWLASEEEEYTWEDMSPTLADRN-RTSV 373
Query: 802 PPFGPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHGSQP 981
P P GS V+ GF P L+ESD +RHSWP +A DGS+ +EDRI ++G
Sbjct: 374 PSL-PLPGS--VRAGFPGPNSVLLESDIMRHSWPAQAPRPAIDGSALNLEDRIPANGPVD 430
Query: 982 RLMMKSLDGP--------SVHSESLSRPDTGKSYMLRQSTQQNLSSRSQRRAAQMLPATR 1137
R + G + S D G++ M QQ + + +A Q PA+
Sbjct: 431 RAANRRYPGNFGVQNGAFLEYQSSEHTLDPGRTAMPAPPWQQTIGQPLRVQAPQ--PAS- 487
Query: 1138 VLNDNSIDMDL---TRRSLSNARADSLKMVSSMMDRN-STQRHPATLLPVHISQSLSLRS 1305
+LN + D +R + D+L + +++++ S+ H P+H +QSL+++
Sbjct: 488 ILNRMPLPTDSEVPVKRLATGGTYDALNVDIPLLEKHRSSPAHAPMEWPLH-TQSLTIQP 546
Query: 1306 VPPTQSPIRTLDASEPNKPTLIQGTHQPIFVPEQQYNVTDKKHSDSVDL 1452
P R S ++P + QG + +FVP+ QY+ D++ ++ DL
Sbjct: 547 TPSDTRHPRGAADSLDSRPYISQGANSSVFVPQHQYDALDRRTINTDDL 595
>ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Nelumbo nucifera]
Length = 895
Score = 153 bits (387), Expect = 3e-36
Identities = 121/361 (33%), Positives = 178/361 (49%), Gaps = 51/361 (14%)
Frame = +1
Query: 454 ASSSHPGSAYAPGRVGNGNG-----WLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDL 618
AS SH GS Y PG+ +G+G W +++ E YN + G ++ PR L
Sbjct: 176 ASPSHSGSEYGPGKATDGDGEKSEWWFKCQQM--------ETSGTYNPSNGCDQQRPRAL 227
Query: 619 IDAYGN--PENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKR 792
IDAYGN +N+ K K +RLD NG S + W+N++EEEY WEDMSPTL DRS+
Sbjct: 228 IDAYGNYRGKNTLNGKPLKVERLDINGINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRG 287
Query: 793 NSIPPFGPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHG 972
N + PF P GS + +TG P +++ESDF R +WP + QL T D ++ I D + G
Sbjct: 288 NDLMPFNPPLGSLSRRTGLERPSTAILESDFRRGNWPNQVQLSTMDDAAFISGDGVSILG 347
Query: 973 SQPRLM-MKSLDGPSVHSESL-------SRPDTGKSYMLRQSTQQNLSSRSQRRAAQM-L 1125
S M SL P +ES S+ + QS+Q++L +++ RA QM
Sbjct: 348 SGHVTMGNNSLRCPQTQNESSHVQSSHHSQEPQNFPHQFPQSSQEHLDLKARGRAVQMSF 407
Query: 1126 PATRVLN----------DNSIDMD---------LTRRSLSNARADSLKMVSSMM-DRNST 1245
PA V+ DN +D D ++R SN +++ +S+MM ++
Sbjct: 408 PAAGVVPSAIKKMPSQVDNFLDTDAQFQRFSGVVSRMGSSNRDTMNVEALSTMMPPASAL 467
Query: 1246 QRH--------PATLLPVHISQS--LSLRSVPPTQSPIRT----LDASE-PNKPTLIQGT 1380
Q+H P PV++ +S SV P Q+ I++ +D S PNK + G
Sbjct: 468 QKHRGQRPSLAPLVWPPVNVPKSHPPPPLSVLPQQNQIKSQSNIMDISRIPNKSLTLPGQ 527
Query: 1381 H 1383
H
Sbjct: 528 H 528
>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 153 bits (387), Expect = 4e-36
Identities = 121/361 (33%), Positives = 178/361 (49%), Gaps = 51/361 (14%)
Frame = +1
Query: 454 ASSSHPGSAYAPGRVGNGNG-----WLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDL 618
AS SH GS Y PG+ +G+G W +++ E YN + G ++ PR L
Sbjct: 352 ASPSHSGSEYGPGKATDGDGEKSEWWFKCQQM--------ETSGTYNPSNGCDQQRPRAL 403
Query: 619 IDAYGN--PENSSFEKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKR 792
IDAYGN +N+ K K +RLD NG S + W+N++EEEY WEDMSPTL DRS+
Sbjct: 404 IDAYGNYRGKNTLNGKPLKVERLDINGINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRG 463
Query: 793 NSIPPFGPSAGSFNVQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRIVSHG 972
N + PF P GS + +TG P +++ESDF R +WP + QL T D ++ I D + G
Sbjct: 464 NDLMPFNPPLGSLSRRTGLERPSTAILESDFRRGNWPNQVQLSTMDDAAFISGDGVSILG 523
Query: 973 SQPRLM-MKSLDGPSVHSESL-------SRPDTGKSYMLRQSTQQNLSSRSQRRAAQM-L 1125
S M SL P +ES S+ + QS+Q++L +++ RA QM
Sbjct: 524 SGHVTMGNNSLRCPQTQNESSHVQSSHHSQEPQNFPHQFPQSSQEHLDLKARGRAVQMSF 583
Query: 1126 PATRVLN----------DNSIDMD---------LTRRSLSNARADSLKMVSSMM-DRNST 1245
PA V+ DN +D D ++R SN +++ +S+MM ++
Sbjct: 584 PAAGVVPSAIKKMPSQVDNFLDTDAQFQRFSGVVSRMGSSNRDTMNVEALSTMMPPASAL 643
Query: 1246 QRH--------PATLLPVHISQS--LSLRSVPPTQSPIRT----LDASE-PNKPTLIQGT 1380
Q+H P PV++ +S SV P Q+ I++ +D S PNK + G
Sbjct: 644 QKHRGQRPSLAPLVWPPVNVPKSHPPPPLSVLPQQNQIKSQSNIMDISRIPNKSLTLPGQ 703
Query: 1381 H 1383
H
Sbjct: 704 H 704
>ref|XP_020674647.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Dendrobium
catenatum]
gb|PKU82431.1| hypothetical protein MA16_Dca005436 [Dendrobium catenatum]
Length = 969
Score = 152 bits (385), Expect = 7e-36
Identities = 142/466 (30%), Positives = 200/466 (42%), Gaps = 34/466 (7%)
Frame = +1
Query: 136 NPKKVIPHQR-LSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSV 312
NP+ I H R +SS Q++ H+ +YN++D+D QP S V G+ + S+
Sbjct: 236 NPEADIRHSREVSSGIQVSGHRSFTKYNDHDLDHFGFQPSSLKMVREGSPLTLTLHGSSM 295
Query: 313 IGSSGPIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTTPGRA----SSSHPGSA 480
G GP + K R ++PGR S SH G
Sbjct: 296 EGQEGPFLSSQRKVASRVSPTRIGLRRSTSPQGHRF----QMSSPGRVIEATSRSHSGLD 351
Query: 481 YAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPENSSF-- 654
+ R NGW+ + ++ Q A T YN YGR+ R+LIDAYGN F
Sbjct: 352 FQSHRASESNGWVGRNLAIDDGAQQSVALTTYNK---YGRQRQRELIDAYGNYRGKDFLH 408
Query: 655 EKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFN 834
E K QR+D NG A +W+NS+EEEY WEDMSPT D SKR+ + S S
Sbjct: 409 ESLPKIQRVDVNGIKGKAGKMDWQNSEEEEYVWEDMSPTHVDPSKRSRMQS-EQSTDSLG 467
Query: 835 VQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI-VSH-GSQPRLMMKSLDG 1008
++ S G +SDF R SWP + S+ ++DRI + H G P M D
Sbjct: 468 LRDNSSRSGIIAQKSDFRRRSWP----VPPLKDSTTTIDDRIGIRHYGLGPMNKMYLDDT 523
Query: 1009 PSV-----HSESLSRPDTGKS--YMLRQSTQQNLSSRSQRRAAQMLP-----ATRVLN-- 1146
S H ES S ++ + T N+S +SQ R Q LP T +N
Sbjct: 524 GSTIQQFRHHESSQHVQEHGSLPHVFHRPTPDNISPKSQGRPFQ-LPYLVGGVTPSVNHK 582
Query: 1147 -----DNSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQRHPATLL---PVHISQSLSLR 1302
DNS + ++ +LS+A +D+ S P + P HISQSL L
Sbjct: 583 RHSFYDNSHNAEMPFLNLSSASSDTTNHEMSTSAAQKAHHPPIAPVPWPPAHISQSLQLL 642
Query: 1303 SVPPTQSPIRTLDASEPNKPTLIQGTHQPIF---VPEQQYNVTDKK 1431
+ Q ++ NKP G QP F P+QQ++ ++
Sbjct: 643 PIANLQ--------TDNNKPI---GNQQPNFSVPFPQQQFDANGRQ 677
>ref|XP_020674645.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Dendrobium
catenatum]
ref|XP_020674646.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Dendrobium
catenatum]
Length = 973
Score = 152 bits (385), Expect = 7e-36
Identities = 142/466 (30%), Positives = 200/466 (42%), Gaps = 34/466 (7%)
Frame = +1
Query: 136 NPKKVIPHQR-LSSTSQINAHKQTAQYNEYDIDQPKLQPQSFVTVGSGARRNNRVGAGSV 312
NP+ I H R +SS Q++ H+ +YN++D+D QP S V G+ + S+
Sbjct: 236 NPEADIRHSREVSSGIQVSGHRSFTKYNDHDLDHFGFQPSSLKMVREGSPLTLTLHGSSM 295
Query: 313 IGSSGPIPFPEEKXXXXXXXXXXXXXXXXXXXXVRSADGTSTTTPGRA----SSSHPGSA 480
G GP + K R ++PGR S SH G
Sbjct: 296 EGQEGPFLSSQRKVASRVSPTRIGLRRSTSPQGHRF----QMSSPGRVIEATSRSHSGLD 351
Query: 481 YAPGRVGNGNGWLDQRRLPNEDPQPPEAYTLYNLNKGYGRKHPRDLIDAYGNPENSSF-- 654
+ R NGW+ + ++ Q A T YN YGR+ R+LIDAYGN F
Sbjct: 352 FQSHRASESNGWVGRNLAIDDGAQQSVALTTYNK---YGRQRQRELIDAYGNYRGKDFLH 408
Query: 655 EKFAKAQRLDGNGTVSAAAAGEWRNSDEEEYAWEDMSPTLADRSKRNSIPPFGPSAGSFN 834
E K QR+D NG A +W+NS+EEEY WEDMSPT D SKR+ + S S
Sbjct: 409 ESLPKIQRVDVNGIKGKAGKMDWQNSEEEEYVWEDMSPTHVDPSKRSRMQS-EQSTDSLG 467
Query: 835 VQTGFSSPGPSLMESDFLRHSWPGEAQLCTADGSSPIVEDRI-VSH-GSQPRLMMKSLDG 1008
++ S G +SDF R SWP + S+ ++DRI + H G P M D
Sbjct: 468 LRDNSSRSGIIAQKSDFRRRSWP----VPPLKDSTTTIDDRIGIRHYGLGPMNKMYLDDT 523
Query: 1009 PSV-----HSESLSRPDTGKS--YMLRQSTQQNLSSRSQRRAAQMLP-----ATRVLN-- 1146
S H ES S ++ + T N+S +SQ R Q LP T +N
Sbjct: 524 GSTIQQFRHHESSQHVQEHGSLPHVFHRPTPDNISPKSQGRPFQ-LPYLVGGVTPSVNHK 582
Query: 1147 -----DNSIDMDLTRRSLSNARADSLKMVSSMMDRNSTQRHPATLL---PVHISQSLSLR 1302
DNS + ++ +LS+A +D+ S P + P HISQSL L
Sbjct: 583 RHSFYDNSHNAEMPFLNLSSASSDTTNHEMSTSAAQKAHHPPIAPVPWPPAHISQSLQLL 642
Query: 1303 SVPPTQSPIRTLDASEPNKPTLIQGTHQPIF---VPEQQYNVTDKK 1431
+ Q ++ NKP G QP F P+QQ++ ++
Sbjct: 643 PIANLQ--------TDNNKPI---GNQQPNFSVPFPQQQFDANGRQ 677