BLASTX nr result

ID: Cheilocostus21_contig00015603 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00015603
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018674273.1| PREDICTED: transcription factor VIP1 isoform...    62   2e-08
ref|XP_009379837.2| PREDICTED: transcription factor VIP1 isoform...    62   2e-08
ref|XP_009404345.1| PREDICTED: transcription factor VIP1 [Musa a...    61   4e-08

>ref|XP_018674273.1| PREDICTED: transcription factor VIP1 isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 292

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = +3

Query: 225 LAHPHNLRHPMHSGCPTPPMNPRFGQIPLPIPR--ACXXXXXXAAHRRANSETFVRVPDY 398
           L HP +    M    P  P NPRFGQIPLP PR          AAHRRA+SETF+RVPD 
Sbjct: 13  LHHPISEHPAMDPAGPLQPPNPRFGQIPLPTPRGLGVGGCGGGAAHRRAHSETFIRVPDD 72

Query: 399 LL 404
           LL
Sbjct: 73  LL 74


>ref|XP_009379837.2| PREDICTED: transcription factor VIP1 isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 347

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = +3

Query: 225 LAHPHNLRHPMHSGCPTPPMNPRFGQIPLPIPR--ACXXXXXXAAHRRANSETFVRVPDY 398
           L HP +    M    P  P NPRFGQIPLP PR          AAHRRA+SETF+RVPD 
Sbjct: 13  LHHPISEHPAMDPAGPLQPPNPRFGQIPLPTPRGLGVGGCGGGAAHRRAHSETFIRVPDD 72

Query: 399 LL 404
           LL
Sbjct: 73  LL 74


>ref|XP_009404345.1| PREDICTED: transcription factor VIP1 [Musa acuminata subsp.
           malaccensis]
          Length = 329

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = +3

Query: 276 PPMNPRFGQIPLPIPRACXXXXXXAAHRRANSETFVRVPDYLLFEPNP 419
           PPMNPRFGQIP P PR        + HRRA SETFVR+PD LLF+ +P
Sbjct: 8   PPMNPRFGQIPFPTPRG-GGGGGASHHRRALSETFVRLPDDLLFDSDP 54


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