BLASTX nr result

ID: Cheilocostus21_contig00015193 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00015193
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009415926.1| PREDICTED: SWI/SNF complex component SNF12 h...    78   8e-14
ref|XP_009405492.1| PREDICTED: SWI/SNF complex component SNF12 h...    70   4e-11

>ref|XP_009415926.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_009415927.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 519

 Score = 78.2 bits (191), Expect = 8e-14
 Identities = 40/70 (57%), Positives = 42/70 (60%)
 Frame = +2

Query: 260 MASNSNNQPRAVGGPPSLVNPGMVAAASANQXXXXXXXXXXXXXXXXXXXXSQMHSQGQP 439
           MASN+NNQPR VGGPP L NPGM + ASANQ                    SQ H Q QP
Sbjct: 1   MASNNNNQPRGVGGPPPLGNPGMASPASANQPPHLRPPPPPGSSPFQGLFHSQAHPQAQP 60

Query: 440 QVHSPFQIQM 469
           QVHSPFQIQM
Sbjct: 61  QVHSPFQIQM 70


>ref|XP_009405492.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_009405493.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Musa acuminata
           subsp. malaccensis]
          Length = 517

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 39/70 (55%), Positives = 39/70 (55%)
 Frame = +2

Query: 260 MASNSNNQPRAVGGPPSLVNPGMVAAASANQXXXXXXXXXXXXXXXXXXXXSQMHSQGQP 439
           MASNSNNQPRAVGG PSL N GM   ASAN                     SQ  SQ QP
Sbjct: 1   MASNSNNQPRAVGGSPSLANSGMGLPASANPPSHLRPPPAPGPSPFQGLFHSQTQSQAQP 60

Query: 440 QVHSPFQIQM 469
           QVHSPFQI M
Sbjct: 61  QVHSPFQIHM 70


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