BLASTX nr result
ID: Cheilocostus21_contig00015193
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00015193 (471 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009415926.1| PREDICTED: SWI/SNF complex component SNF12 h... 78 8e-14 ref|XP_009405492.1| PREDICTED: SWI/SNF complex component SNF12 h... 70 4e-11 >ref|XP_009415926.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1 [Musa acuminata subsp. malaccensis] ref|XP_009415927.1| PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1 [Musa acuminata subsp. malaccensis] Length = 519 Score = 78.2 bits (191), Expect = 8e-14 Identities = 40/70 (57%), Positives = 42/70 (60%) Frame = +2 Query: 260 MASNSNNQPRAVGGPPSLVNPGMVAAASANQXXXXXXXXXXXXXXXXXXXXSQMHSQGQP 439 MASN+NNQPR VGGPP L NPGM + ASANQ SQ H Q QP Sbjct: 1 MASNNNNQPRGVGGPPPLGNPGMASPASANQPPHLRPPPPPGSSPFQGLFHSQAHPQAQP 60 Query: 440 QVHSPFQIQM 469 QVHSPFQIQM Sbjct: 61 QVHSPFQIQM 70 >ref|XP_009405492.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Musa acuminata subsp. malaccensis] ref|XP_009405493.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Musa acuminata subsp. malaccensis] Length = 517 Score = 70.5 bits (171), Expect = 4e-11 Identities = 39/70 (55%), Positives = 39/70 (55%) Frame = +2 Query: 260 MASNSNNQPRAVGGPPSLVNPGMVAAASANQXXXXXXXXXXXXXXXXXXXXSQMHSQGQP 439 MASNSNNQPRAVGG PSL N GM ASAN SQ SQ QP Sbjct: 1 MASNSNNQPRAVGGSPSLANSGMGLPASANPPSHLRPPPAPGPSPFQGLFHSQTQSQAQP 60 Query: 440 QVHSPFQIQM 469 QVHSPFQI M Sbjct: 61 QVHSPFQIHM 70