BLASTX nr result

ID: Cheilocostus21_contig00015058 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00015058
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009420664.1| PREDICTED: GRF1-interacting factor 1 [Musa a...    40   1e-07
ref|XP_010932533.1| PREDICTED: GRF1-interacting factor 1 [Elaeis...    39   7e-07
ref|XP_009417122.1| PREDICTED: GRF1-interacting factor 1-like is...    41   7e-07
ref|XP_008794036.1| PREDICTED: GRF1-interacting factor 1 [Phoeni...    39   1e-06

>ref|XP_009420664.1| PREDICTED: GRF1-interacting factor 1 [Musa acuminata subsp.
           malaccensis]
          Length = 214

 Score = 40.4 bits (93), Expect(3) = 1e-07
 Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 3/45 (6%)
 Frame = +3

Query: 6   ANKEAPIIAQFPLITVMQSSPHYIQH--GQ*MTPR-LVSAQASML 131
           + ++ P IAQFP  TVMQS+P ++Q+   Q MTP+ L++A++SML
Sbjct: 72  SQQQVPTIAQFPPSTVMQSAPRHVQYQQAQQMTPQALMAARSSML 116



 Score = 32.0 bits (71), Expect(3) = 1e-07
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 13/62 (20%)
 Frame = +1

Query: 136 SPM*VLQQAG*GMAISV*SVNSEGNGGFSMLHS-------------IFSESNRRSSVKQE 276
           SP+  LQQ       +   V+  GN GF+MLH              +FS+  R SS KQE
Sbjct: 120 SPISALQQQQQAALHTQLGVSPGGNSGFNMLHGEASVGGNGLPAAGVFSDFGRSSSAKQE 179

Query: 277 AG 282
            G
Sbjct: 180 TG 181



 Score = 30.0 bits (66), Expect(3) = 1e-07
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +2

Query: 305 RREN*RKQNRDCTRPLQLKGSEEE 376
           R  N  +QN D T PL LKGSEEE
Sbjct: 189 RGNNSGRQNGDGTEPLYLKGSEEE 212


>ref|XP_010932533.1| PREDICTED: GRF1-interacting factor 1 [Elaeis guineensis]
          Length = 215

 Score = 39.3 bits (90), Expect(3) = 7e-07
 Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
 Frame = +3

Query: 15  EAPIIAQFPLITVMQSSPHYIQH--GQ*MTPR-LVSAQASML 131
           + P IAQFP   VMQS P Y+QH   Q MTP+ L++A+++ML
Sbjct: 75  QVPTIAQFPPNAVMQSGPRYMQHQQAQQMTPQSLMAARSAML 116



 Score = 31.2 bits (69), Expect(3) = 7e-07
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
 Frame = +1

Query: 136 SPM*VLQQAG*GMAISV*SVNSEGNGGFSMLH-------------SIFSESNRRS-SVKQ 273
           SPM  LQQ       S   ++S GN G+SMLH              +F +  R S S KQ
Sbjct: 120 SPMSALQQQQQAALHSQLGMSSGGNSGYSMLHGETSIGGNGTLAAGVFPDFGRSSGSAKQ 179

Query: 274 EAGN 285
           E GN
Sbjct: 180 EVGN 183



 Score = 29.6 bits (65), Expect(3) = 7e-07
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 326 QNRDCTRPLQLKGSEEEG 379
           Q+ D T PL LKGSEEEG
Sbjct: 197 QSGDATEPLYLKGSEEEG 214


>ref|XP_009417122.1| PREDICTED: GRF1-interacting factor 1-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 214

 Score = 41.2 bits (95), Expect(3) = 7e-07
 Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
 Frame = +3

Query: 9   NKEAPIIAQFPLITVMQSSPHYIQH--GQ*MTPR-LVSAQASML 131
           +++ P +AQFP  TVMQS P YI H   Q MTP+ L++A++SML
Sbjct: 72  SQQVPTLAQFPPNTVMQSGPRYIPHQQAQPMTPQSLLAARSSML 115



 Score = 35.0 bits (79), Expect(3) = 7e-07
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 13/63 (20%)
 Frame = +1

Query: 136 SPM*VLQQAG*GMAISV*SVNSEGNGGFSMLHS-------------IFSESNRRSSVKQE 276
           SPM  LQQ           V S GN GF++LH              +FS+  R + VKQE
Sbjct: 119 SPMSTLQQQQQAALHGQLGVGSGGNSGFNVLHGEASIGGNGMLAAGVFSDFGRSNLVKQE 178

Query: 277 AGN 285
           AGN
Sbjct: 179 AGN 181



 Score = 23.9 bits (50), Expect(3) = 7e-07
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 305 RREN*RKQNRDCTRPLQLKGSEEEGKE 385
           R  N  +Q+ D   PL  KGSEEE  +
Sbjct: 188 RGGNPGRQSGDGAEPLYSKGSEEEANQ 214


>ref|XP_008794036.1| PREDICTED: GRF1-interacting factor 1 [Phoenix dactylifera]
          Length = 215

 Score = 39.3 bits (90), Expect(3) = 1e-06
 Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
 Frame = +3

Query: 15  EAPIIAQFPLITVMQSSPHYIQH--GQ*MTPR-LVSAQASML 131
           + P IAQFP   VMQS P Y+QH   Q MTP+ L++A+++ML
Sbjct: 75  QVPTIAQFPPNAVMQSGPRYMQHQQAQQMTPQSLMAARSAML 116



 Score = 30.0 bits (66), Expect(3) = 1e-06
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
 Frame = +1

Query: 136 SPM*VLQQAG*GMAISV*SVNSEGNGGFSMLH-------------SIFSESNRRS-SVKQ 273
           SPM  LQQ       S   ++S GN G++MLH              +F +  R S S KQ
Sbjct: 120 SPMSALQQQQQAALHSQLGMSSGGNSGYNMLHGETSIGGNGTLAAGVFPDFGRSSGSAKQ 179

Query: 274 EAGN 285
           E GN
Sbjct: 180 EVGN 183



 Score = 29.6 bits (65), Expect(3) = 1e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 326 QNRDCTRPLQLKGSEEEG 379
           Q+ D T PL LKGSEEEG
Sbjct: 197 QSGDATEPLYLKGSEEEG 214


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