BLASTX nr result
ID: Cheilocostus21_contig00014892
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00014892
(1480 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 269 2e-75
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574... 265 4e-74
gb|AIK01816.1| ORF3 [Piper yellow mottle virus] 265 6e-74
gb|ACH86210.1| unknown [Citrus yellow mosaic virus] 248 3e-73
gb|AIK01824.1| ORF3 [Piper yellow mottle virus] 260 2e-72
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|... 255 1e-70
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus] 255 1e-70
gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 252 1e-69
gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 252 1e-69
gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 251 4e-69
gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 250 5e-69
gb|ASG91901.1| polyprotein [Cacao swollen shoot virus] 250 5e-69
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 250 5e-69
gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 250 7e-69
gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 250 7e-69
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 250 7e-69
gb|ATZ69459.1| ORF3 polyprotein [Cacao swollen shoot CE virus] 249 1e-68
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 248 2e-68
gb|ASG91874.1| polyprotein [Cacao swollen shoot virus] 248 3e-68
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 248 3e-68
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 269 bits (687), Expect = 2e-75
Identities = 136/239 (56%), Positives = 182/239 (76%), Gaps = 5/239 (2%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
GV+QVR+QILHR+EEGTLA+++FRD RW+ D+ IIATMEVDLT+G Q++Y+IPDIMMT++
Sbjct: 126 GVLQVRLQILHRKEEGTLALVVFRDNRWKGDKGIIATMEVDLTKGCQMVYIIPDIMMTVN 185
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF+ NI ISILTRGYE WQ+GEANLL+TRG+IGRLSNTPNV FAY++Q +VDY +HGVN
Sbjct: 186 DFYHNIHISILTRGYEGWQHGEANLLVTRGMIGRLSNTPNVGFAYDIQEVVDYFITHGVN 245
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPGQPTEVESQNLLDGRISISFRNYIA-ANTNRPA 942
ALPG +Y T++L+ I+ +I P +P ++ S++L+DG IS+ F NY ANT++P
Sbjct: 246 ALPGAKYDTARLQGQQWILKKPELIAPTRPGQINSKDLVDGTISLRFSNYTTQANTSKP- 304
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQE----PLLYVKLLTNTGVPPIRRTKLSAGYDL 777
+Y ND++IQSDEE I+A I E QE +L V LT P+R + +AGY+L
Sbjct: 305 KYNANDEEIQSDEE---ILAYIHQERQEVTTPEVLGVIRLTPEARLPVRTSPSAAGYNL 360
Score = 142 bits (357), Expect = 4e-32
Identities = 67/101 (66%), Positives = 79/101 (78%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCC+D IP++ALE N Y V F GI SKT+ N KL+ G+MIIG F++PYT
Sbjct: 1206 ILDTGATTCCVDERVIPQEALEANPYLVHFRGINSKTTANKKLKYGRMIIGDQQFKVPYT 1265
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPM + + IQMILGCNFIR+M GGVRIEGN VTFYK T
Sbjct: 1266 YAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYVT 1306
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 265 bits (677), Expect = 4e-74
Identities = 131/238 (55%), Positives = 176/238 (73%), Gaps = 4/238 (1%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
GV+QVR+QILHR+EEGTLA+++FRD RW+ D+ IIATMEVDLT+G Q++Y+IPDIMMT++
Sbjct: 126 GVLQVRLQILHRKEEGTLALVVFRDNRWKGDKGIIATMEVDLTKGCQMVYIIPDIMMTVN 185
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF+ NI IS+LTRGYE WQ+GEANLL+TRG+IGRLSNTPNV FAY++Q +VDY +HGVN
Sbjct: 186 DFYHNIHISVLTRGYEGWQHGEANLLVTRGMIGRLSNTPNVGFAYDIQEVVDYFITHGVN 245
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPGQPTEVESQNLLDGRISISFRNYIAANTNRPAR 939
ALPG +Y T++L+ I+ +I P +P + S++L+DG IS+ F NY + +
Sbjct: 246 ALPGAKYDTTRLQGQQWILKKPELIVPTRPGHINSKDLVDGTISLRFSNYTTQASTSKLK 305
Query: 938 YGNNDDKIQSDEENRQIIATIIVEVQE----PLLYVKLLTNTGVPPIRRTKLSAGYDL 777
Y ND++IQSDEE I+A I E QE +L V LT P+R + +AGY+L
Sbjct: 306 YNANDEEIQSDEE---ILAYIHQERQEVTTPEVLGVIRLTPEARLPVRTSPSAAGYNL 360
Score = 142 bits (358), Expect = 3e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID IP++ALE N Y V F GI SKT+ N KL+ G+MIIG F++PYT
Sbjct: 1205 ILDTGATTCCIDERVIPQEALEANPYLVHFRGINSKTTANKKLKYGRMIIGDQQFKVPYT 1264
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPM + + IQMILGCNFIR+M GGVRIEGN VTFYK T
Sbjct: 1265 YAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYVT 1305
>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 265 bits (676), Expect = 6e-74
Identities = 130/238 (54%), Positives = 176/238 (73%), Gaps = 4/238 (1%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
GV+QVR+QILHR+EEGTLA+++FRD RW+ D+ IIATMEVDLT+G Q++Y+IPDIMMT++
Sbjct: 126 GVLQVRLQILHRKEEGTLALVVFRDNRWKGDKGIIATMEVDLTKGCQMVYIIPDIMMTVN 185
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF+ NI IS+LTRGYE WQ+GEANLL+TRG+IGRLSNTPN+ FAY++Q +VDY +HGVN
Sbjct: 186 DFYHNIHISVLTRGYEGWQHGEANLLVTRGMIGRLSNTPNIGFAYDIQEVVDYFITHGVN 245
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPGQPTEVESQNLLDGRISISFRNYIAANTNRPAR 939
ALPG +Y T++L+ I+ +I P +P + S++L+DG IS+ F NY + +
Sbjct: 246 ALPGAKYDTTRLQGQQWILKKPELIVPTRPGHINSKDLVDGTISLRFSNYTTQASTSKLK 305
Query: 938 YGNNDDKIQSDEENRQIIATIIVEVQE----PLLYVKLLTNTGVPPIRRTKLSAGYDL 777
Y ND++IQSDEE I+A I E QE +L V LT P+R + +AGY+L
Sbjct: 306 YNANDEEIQSDEE---ILAYIHQERQEVTTPEVLGVIRLTPEARLPVRTSPSAAGYNL 360
Score = 140 bits (353), Expect = 1e-31
Identities = 67/101 (66%), Positives = 78/101 (77%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGAT CCID IP++ALE N Y V F GI SKT+ N KL+ G+MIIG F++PYT
Sbjct: 1205 ILDTGATACCIDERVIPQEALEANPYLVHFRGINSKTTANKKLKYGRMIIGDQQFKVPYT 1264
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPM + + IQMILGCNFIR+M GGVRIEGN VTFYK T
Sbjct: 1265 YAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYVT 1305
>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
Length = 463
Score = 248 bits (633), Expect = 3e-73
Identities = 112/198 (56%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT A+++FRD RW+ D+SI ATME+DLT+G Q++Y+IPD MMT+
Sbjct: 142 GIVQVRIQILHRQHEGTTALVVFRDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVR 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+QISILT+GY WQNGEANLL+TRG++GRLSNTPNVAFAY++Q + DYL SHG+
Sbjct: 202 DFCRNVQISILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQ 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
ALPGRRYS++ ++ + PS I P PT V+++N++DG IS+ F +Y A P
Sbjct: 262 ALPGRRYSSADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPV 321
Query: 941 RYGNNDDKIQSDEENRQI 888
Y +D+++ DE+ QI
Sbjct: 322 AYNQHDEEVPLDEDEEQI 339
>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 260 bits (664), Expect = 2e-72
Identities = 131/239 (54%), Positives = 180/239 (75%), Gaps = 5/239 (2%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
GV+QVR+QILHR+EEGTLA+++FRD RW+ D+ IIA MEVDLT+G Q++Y+IPDIMMT++
Sbjct: 126 GVLQVRLQILHRKEEGTLALVVFRDNRWKGDKGIIAAMEVDLTKGCQMVYIIPDIMMTVN 185
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF+ NI IS+LTRGYE WQ+GEANLL+TRG+IGRLSNTPNV FAY++Q +VDY +HGV+
Sbjct: 186 DFYHNIHISVLTRGYEGWQHGEANLLVTRGMIGRLSNTPNVGFAYDIQEVVDYFITHGVH 245
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPGQPTEVESQNLLDGRISISFRNY-IAANTNRPA 942
ALPG +Y T++L+ I+ +I P +P +++S++L+DG +S+ F NY A+T+RP
Sbjct: 246 ALPGAKYDTARLQGQQWILKKPELIIPTKPEQIQSKDLVDGTVSLRFSNYSTQASTSRP- 304
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPL----LYVKLLTNTGVPPIRRTKLSAGYDL 777
+Y D++IQSDEE I+A I E QE L V LT P+R + +AGY+L
Sbjct: 305 KYNEEDEEIQSDEE---ILAYIHQERQEVTTPEDLGVIRLTPEARLPMRTSPSAAGYNL 360
Score = 142 bits (357), Expect = 4e-32
Identities = 67/101 (66%), Positives = 79/101 (78%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCC+D IP++ALE N Y V F GI SKT+ N KL+ G+MIIG F++PYT
Sbjct: 1206 ILDTGATTCCVDERVIPQEALEANPYLVHFRGINSKTAANKKLKYGRMIIGDQQFKVPYT 1265
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPM + + IQMILGCNFIR+M GGVRIEGN VTFYK T
Sbjct: 1266 YAFPMTISDDIQMILGCNFIRAMHGGVRIEGNEVTFYKYVT 1306
>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 255 bits (651), Expect = 1e-70
Identities = 126/209 (60%), Positives = 162/209 (77%), Gaps = 2/209 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
GV+Q+RIQ LHR +EGTLA+++FRD RW DDRS+ ATMEVDL++GSQL+YVIP+ MMTI
Sbjct: 142 GVIQLRIQALHRHDEGTLALVVFRDNRWPDDRSLFATMEVDLSQGSQLVYVIPNTMMTIG 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF+ N+Q+SILTRGYE W+ GEANLLITRGL+GRLSNTPNV FAYEVQ +VDYL SHGV
Sbjct: 202 DFYNNVQVSILTRGYEAWR-GEANLLITRGLVGRLSNTPNVGFAYEVQSVVDYLVSHGVQ 260
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPGQPTEVESQNLLDGRISISFRNYIAANTNRPAR 939
A+PGRR + +L+ N ++ P++ P QPTEV+++ +DG IS+ F NY +A T+ R
Sbjct: 261 AIPGRRRTVQELQGYNWVVRPTQASIPRQPTEVDTRTNIDGTISLRFGNYTSARTSTTRR 320
Query: 938 --YGNNDDKIQSDEENRQIIATIIVEVQE 858
Y D++IQSDEE QIIA ++ E
Sbjct: 321 IAYNLRDEEIQSDEE--QIIAVFKLDCYE 347
Score = 148 bits (373), Expect = 4e-34
Identities = 72/101 (71%), Positives = 83/101 (82%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGA+TCCI+ +IPE A+E++ + SGI SK STN KLR GKMIIG N FRIPYT
Sbjct: 1109 ILDTGASTCCINAGAIPENAVEESPFMASSSGINSKVSTNKKLRYGKMIIGDNAFRIPYT 1168
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y FPM+LG+ IQMILGCNFIRSM+GGVRIEG+ VTFYKN T
Sbjct: 1169 YVFPMQLGDDIQMILGCNFIRSMQGGVRIEGDTVTFYKNVT 1209
>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 255 bits (651), Expect = 1e-70
Identities = 126/209 (60%), Positives = 162/209 (77%), Gaps = 2/209 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
GV+Q+RIQ LHR +EGTLA+++FRD RW DDRS+ ATMEVDL++GSQL+YVIP+ MMTI
Sbjct: 142 GVIQLRIQALHRHDEGTLALVVFRDNRWPDDRSLFATMEVDLSQGSQLVYVIPNTMMTIG 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF+ N+Q+SILTRGYE W+ GEANLLITRGL+GRLSNTPNV FAYEVQ +VDYL SHGV
Sbjct: 202 DFYNNVQVSILTRGYEAWR-GEANLLITRGLVGRLSNTPNVGFAYEVQSVVDYLVSHGVR 260
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPGQPTEVESQNLLDGRISISFRNYIAANTNRPAR 939
A+PGRR + +L+ N ++ P++ P QPTEV+++ +DG IS+ F NY +A T+ R
Sbjct: 261 AIPGRRRTVQELQGYNWVVRPTQASIPRQPTEVDTRTNIDGTISLRFGNYTSARTSTTRR 320
Query: 938 --YGNNDDKIQSDEENRQIIATIIVEVQE 858
Y D++IQSDEE QIIA ++ E
Sbjct: 321 IAYNLRDEEIQSDEE--QIIAVFKLDCYE 347
Score = 149 bits (375), Expect = 2e-34
Identities = 81/134 (60%), Positives = 96/134 (71%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGA+TCCI+ +IPE A+E+ + FSGI SK STN KLR GKMIIG N FRIPYT
Sbjct: 1109 ILDTGASTCCINAEAIPENAVEEIPFMANFSGINSKVSTNKKLRYGKMIIGDNAFRIPYT 1168
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYTVPPLGKTKASTGIALAIPE 381
Y FPM+LG+ IQMILGCNFIRSM+GGVRIEG+ V FYKN T +T+ + I AI E
Sbjct: 1169 YVFPMQLGDDIQMILGCNFIRSMQGGVRIEGDTVAFYKNVTQI---QTQQTVPIIAAIEE 1225
Query: 382 GYYGQIAARSIAAL 423
+ SIAA+
Sbjct: 1226 LELEEEEYISIAAI 1239
>gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 252 bits (644), Expect = 1e-69
Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT+A+++FRDTRW DRSI ATMEVDLTRGSQL+Y IPD MMTI+
Sbjct: 142 GILQVRIQILHRQREGTMALVVFRDTRWEGDRSIFATMEVDLTRGSQLVYAIPDTMMTIN 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +++QISILTRGY+ WQ GEANLL+TRG++GRLSNT NV FAY +QG+ DYL SHGV
Sbjct: 202 DFCQHVQISILTRGYDQWQAGEANLLVTRGMVGRLSNTSNVGFAYSIQGVTDYLASHGVR 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPG-QPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GR YST++++ N I P+R I QP+ V+++NLL G IS+ F NY A P
Sbjct: 262 AIQGREYSTAEVQGRNWTIRPARPIATAMQPSSVQTRNLLGGAISMRFGNYGVAREAEPP 321
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPLLYVKLLTNTGVPPIRRTKLSAGYDL 777
RY +ND++ + + T+ + +Q+ + + G PI G D+
Sbjct: 322 RYNSNDEEDEDEASITSEQQTVFLLIQQEAPQTQYIPGVGRRPIHEKWGPLGEDI 376
Score = 141 bits (355), Expect = 7e-32
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID +IPE LE N + V FSGI S +++ KL++G+M IG N+FRIPYT
Sbjct: 1077 ILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYT 1136
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPMK+ + IQMI+GCNFIR+M+GG+RIEGN +TFYK T
Sbjct: 1137 YAFPMKIADGIQMIVGCNFIRNMQGGLRIEGNTITFYKFLT 1177
>gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 252 bits (644), Expect = 1e-69
Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT+A+++FRDTRW DRSI ATMEVDLTRGSQL+Y IPD MMTI+
Sbjct: 142 GILQVRIQILHRQREGTMALVVFRDTRWEGDRSIFATMEVDLTRGSQLVYAIPDTMMTIN 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +++QISILTRGY+ WQ GEANLL+TRG++GRLSNT NV FAY +QG+ DYL SHGV
Sbjct: 202 DFCQHVQISILTRGYDQWQAGEANLLVTRGMVGRLSNTSNVGFAYSIQGVTDYLASHGVR 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPG-QPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GR YST++++ N I P+R I QP+ V+++NLL G IS+ F NY A P
Sbjct: 262 AIQGREYSTAEVQGRNWTIRPARPIATAMQPSSVQTRNLLGGAISMRFGNYGVAREAEPP 321
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPLLYVKLLTNTGVPPIRRTKLSAGYDL 777
RY +ND++ + + T+ + +Q+ + + G PI G D+
Sbjct: 322 RYNSNDEEDEDEASITSEQQTVFLLIQQEAPQTQYIPGVGRRPIHEKWGPLGEDI 376
Score = 141 bits (355), Expect = 7e-32
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID +IPE LE N + V FSGI S +++ KL++G+M IG N+FRIPYT
Sbjct: 1077 ILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYT 1136
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPMK+ + IQMI+GCNFIR+M+GG+RIEGN +TFYK T
Sbjct: 1137 YAFPMKIADGIQMIVGCNFIRNMQGGLRIEGNTITFYKFLT 1177
>gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1839
Score = 251 bits (640), Expect = 4e-69
Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT+A+++FRDTRW DRSI ATMEVDLTRGSQL+Y IPD MMTI+
Sbjct: 142 GILQVRIQILHRQREGTMALVVFRDTRWEGDRSIFATMEVDLTRGSQLVYAIPDTMMTIN 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +++QISILTRGY+ WQ GEANLLITRG++GRLSNT NV FAY +QG+ DYL SHGV
Sbjct: 202 DFCQHVQISILTRGYDQWQAGEANLLITRGMVGRLSNTSNVGFAYSIQGVTDYLASHGVR 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPG-QPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GR YST++++ N I P+R I QP+ V+++NLL G IS+ F NY A P
Sbjct: 262 AIQGREYSTAEVQGRNWTIRPARPIATAMQPSSVQTRNLLGGAISMRFGNYGVAREAEPP 321
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPLLYVKLLTNTGVPPIRRTKLSAGYDL 777
RY ++D++ + + T+ + +Q+ + + G PI G D+
Sbjct: 322 RYNSDDEEDEDEASITSEQQTVFLLIQQETPQTQYIPGVGRRPIHEKWGPLGEDI 376
Score = 141 bits (356), Expect = 5e-32
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID +IPE LE N + V FSGI S +++ KL++G+M IG N+FRIPYT
Sbjct: 1083 ILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYT 1142
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPMK+ + IQMI+GCNFIR+M+GG+RIEGN +TFYK T
Sbjct: 1143 YAFPMKIADGIQMIIGCNFIRNMQGGLRIEGNTITFYKFLT 1183
>gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 250 bits (639), Expect = 5e-69
Identities = 123/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT+A+++FRDTRW DRSI ATMEVDLTRGSQL+Y IPD MMTI+
Sbjct: 142 GILQVRIQILHRQREGTMALVVFRDTRWEGDRSIFATMEVDLTRGSQLVYAIPDTMMTIN 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +++QISILTRGY+ WQ GEANLL+TRG++GRLSNT NV FAY +QG+ DYL SHGV
Sbjct: 202 DFCQHVQISILTRGYDQWQAGEANLLVTRGMVGRLSNTSNVGFAYSIQGVTDYLASHGVR 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPG-QPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GR YST++++ N I P+R I QP+ V+++NLL G IS+ F NY A P
Sbjct: 262 AIQGREYSTAEVQGRNWTIRPARPIATAMQPSSVQTRNLLGGAISMRFGNYGVAREAEPP 321
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPLLYVKLLTNTGVPPIRRTKLSAGYDL 777
RY ++D++ + + T+ + +Q+ + + G PI G D+
Sbjct: 322 RYNSDDEEDEDEASITSEQQTVFLLIQQEAPQTQYIPGVGRRPIHEKWGPLGEDI 376
Score = 141 bits (355), Expect = 7e-32
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID +IPE LE N + V FSGI S +++ KL++G+M IG N+FRIPYT
Sbjct: 1077 ILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYT 1136
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPMK+ + IQMI+GCNFIR+M+GG+RIEGN +TFYK T
Sbjct: 1137 YAFPMKIADGIQMIVGCNFIRNMQGGLRIEGNTITFYKFLT 1177
>gb|ASG91901.1| polyprotein [Cacao swollen shoot virus]
Length = 1869
Score = 250 bits (639), Expect = 5e-69
Identities = 120/194 (61%), Positives = 151/194 (77%), Gaps = 1/194 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQEEGT+A+I+FRDTRW D+SI A ME+DLT+GSQL+YVIPD MMTI
Sbjct: 153 GILQVRIQILHRQEEGTMALIVFRDTRWTGDQSIFAQMEIDLTKGSQLVYVIPDTMMTIG 212
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+QISILTRGYE WQNGEANLLITR + GRLSNTPNVAFAY+++G DYL SHGV
Sbjct: 213 DFARNVQISILTRGYENWQNGEANLLITRAMTGRLSNTPNVAFAYQIEGATDYLASHGVK 272
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ G+++ LRN I+ P + I P QP V+++NL+DG IS+ FR+Y RP
Sbjct: 273 AIAGKKFDLQHLRNQQWILRPPQASIMPMQPRSVDTRNLIDGSISLRFRDYEVQPPARP- 331
Query: 941 RYGNNDDKIQSDEE 900
Y D++++SDEE
Sbjct: 332 HYNEEDEEVESDEE 345
Score = 135 bits (340), Expect = 6e-30
Identities = 61/101 (60%), Positives = 80/101 (79%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCC+D S+P++A+E+N + VQF GI S+ + KL+ G+M I + FRIPY
Sbjct: 1103 ILDTGATTCCVDINSVPKEAIEQNTFLVQFRGINSQQQVDKKLKYGRMTISDHNFRIPYC 1162
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FP+ LG+ IQMILGCNFIR+M GG+RIEG+ +TFYKN T
Sbjct: 1163 YAFPLTLGDGIQMILGCNFIRNMYGGLRIEGHTITFYKNVT 1203
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 250 bits (639), Expect = 5e-69
Identities = 113/198 (57%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT A+++FRD RW+ D+SI ATME+DLT+G Q++Y+IPD MMT+
Sbjct: 142 GIVQVRIQILHRQHEGTTALVVFRDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVR 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+QISILT+GY WQNGEANLL+TRG++GRLSNTPNVAFAY++Q + DYL SHG+
Sbjct: 202 DFCRNVQISILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQ 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
ALPGRRYST+ ++ + PS I P PT V+++N++DG IS+ F +Y A P
Sbjct: 262 ALPGRRYSTADIQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPTPV 321
Query: 941 RYGNNDDKIQSDEENRQI 888
Y +D+++ DE+ QI
Sbjct: 322 AYNQHDEEVPPDEDEEQI 339
Score = 139 bits (350), Expect = 3e-31
Identities = 65/101 (64%), Positives = 78/101 (77%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID S+P+ ALE+N + V FSGI SK KL++GKM I + FRIPY
Sbjct: 1208 ILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKTGKMFINEHYFRIPYC 1267
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
YSF M++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK T
Sbjct: 1268 YSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQIT 1308
>gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 250 bits (638), Expect = 7e-69
Identities = 123/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT+A+++FRDTRW DRSI ATMEVDLTRGSQL+Y IPD MMTI+
Sbjct: 142 GILQVRIQILHRQREGTMALVVFRDTRWEGDRSIFATMEVDLTRGSQLVYAIPDTMMTIN 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +++QISILTRGY+ WQ GEANLL+TRG++GRLSNT NV FAY +QG+ DYL SHGV
Sbjct: 202 DFCQHVQISILTRGYDQWQAGEANLLLTRGMVGRLSNTSNVGFAYSIQGVTDYLASHGVR 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPG-QPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GR YST++++ N I P+R I QP+ V+++NLL G IS+ F NY A P
Sbjct: 262 AIQGREYSTAEVQGRNWTIRPARPIATAMQPSSVQTRNLLGGAISMRFGNYGVAREAEPP 321
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPLLYVKLLTNTGVPPIRRTKLSAGYDL 777
RY ++D++ + + T+ + +Q+ + + G PI G D+
Sbjct: 322 RYNSDDEEDEDEASITSEQQTVFLLIQQEAPQTQYIPGVGRRPIHEKWGPLGEDI 376
Score = 141 bits (355), Expect = 7e-32
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID +IPE LE N + V FSGI S +++ KL++G+M IG N+FRIPYT
Sbjct: 1077 ILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYT 1136
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPMK+ + IQMI+GCNFIR+M+GG+RIEGN +TFYK T
Sbjct: 1137 YAFPMKIADGIQMIVGCNFIRNMQGGLRIEGNTITFYKFLT 1177
>gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 250 bits (638), Expect = 7e-69
Identities = 123/235 (52%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT+A+++FRDTRW DRSI ATMEVDLTRGSQL+Y IPD MMTI+
Sbjct: 142 GILQVRIQILHRQREGTMALVVFRDTRWEGDRSIFATMEVDLTRGSQLVYAIPDTMMTIN 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +++QISILTRGY+ WQ GEANLL+TRG++GRLSNT NV FAY +QG+ DYL SHGV
Sbjct: 202 DFCQHVQISILTRGYDQWQAGEANLLLTRGMVGRLSNTSNVGFAYSIQGVTDYLASHGVR 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIEPG-QPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GR YST++++ N I P+R I QP+ V+++NLL G IS+ F NY A P
Sbjct: 262 AIQGREYSTAEVQGRNWTIRPARPIATAMQPSSVQTRNLLGGAISMRFGNYGVAREAEPP 321
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQEPLLYVKLLTNTGVPPIRRTKLSAGYDL 777
RY ++D++ + + T+ + +Q+ + + G PI G D+
Sbjct: 322 RYNSDDEEDEDEASITSEQQTVFLLIQQEAPQTQYIPGVGRRPIHEKWGPLGEDI 376
Score = 141 bits (355), Expect = 7e-32
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID +IPE LE N + V FSGI S +++ KL++G+M IG N+FRIPYT
Sbjct: 1077 ILDTGATTCCIDLETIPEGLLEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYT 1136
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FPMK+ + IQMI+GCNFIR+M+GG+RIEGN +TFYK T
Sbjct: 1137 YAFPMKIADGIQMIVGCNFIRNMQGGLRIEGNTITFYKFLT 1177
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 250 bits (638), Expect = 7e-69
Identities = 118/207 (57%), Positives = 153/207 (73%), Gaps = 3/207 (1%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G+MQVR+QILHRQ EGT+A+++FRDTRW D+SI ATMEVDLT G Q+IYV+PD MMTI
Sbjct: 146 GIMQVRLQILHRQNEGTMALVVFRDTRWNGDQSIFATMEVDLTEGRQIIYVVPDTMMTIG 205
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +NIQISILTRGY WQNGEANLL+TRG++GRLSNTPNVAFAYE+ + DYLTS GV
Sbjct: 206 DFARNIQISILTRGYSNWQNGEANLLVTRGIVGRLSNTPNVAFAYEIGNVTDYLTSQGVQ 265
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRIIE-PGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ GRRY + +L+N I+ P ++ P P V+++NL+DG IS+ FR+Y +T
Sbjct: 266 AIAGRRYDSRELQNQQWILRPPQVERLPQAPKNVDTRNLIDGSISLRFRDYATTSTPELP 325
Query: 941 RYGNNDDKIQSDEEN--RQIIATIIVE 867
Y D+++ DEE ++A + E
Sbjct: 326 SYNEQDEEVDPDEEQLMEHVVAAFVEE 352
Score = 123 bits (308), Expect = 7e-26
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGAT+CCI IP+ A+E N +EV F GI S +N KL+ G+M IG + FRIPYT
Sbjct: 1143 ILDTGATSCCISMDKIPKAAIEPNTFEVTFRGINSVQKSNKKLKYGQMRIGGHMFRIPYT 1202
Query: 202 YSF-PMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y F + LG+ +Q +LGCNFIR+M GGVR+EG VTFYKN T
Sbjct: 1203 YCFESLTLGDDVQYVLGCNFIRNMHGGVRLEGTEVTFYKNIT 1244
>gb|ATZ69459.1| ORF3 polyprotein [Cacao swollen shoot CE virus]
Length = 1855
Score = 249 bits (636), Expect = 1e-68
Identities = 121/212 (57%), Positives = 156/212 (73%), Gaps = 4/212 (1%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQEEGT+A+I+FRD RW D+SI A MEVDLT+GSQL+Y+IPD MMTI
Sbjct: 148 GILQVRIQILHRQEEGTMALIVFRDNRWTGDQSIFAQMEVDLTKGSQLVYIIPDTMMTIG 207
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+QISILTRGYE WQNGEANLLITR + GRLSNTPNVAFAY++ G DYL SHGV
Sbjct: 208 DFARNVQISILTRGYENWQNGEANLLITRAMTGRLSNTPNVAFAYQIDGATDYLASHGVK 267
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ G+++ LRN ++ P + I P QP VE++NL+DG IS+ FR+Y T
Sbjct: 268 AITGKKFDLQHLRNQQWVLRPPQAPIMPMQPRTVETRNLVDGSISLRFRDYETQPTTSLP 327
Query: 941 RYGNNDDKIQSDEEN---RQIIATIIVEVQEP 855
Y D++++S++E+ +A I E +EP
Sbjct: 328 HYNEEDEEVESEDESTIREHTVAVWIGEEEEP 359
Score = 139 bits (351), Expect = 2e-31
Identities = 64/101 (63%), Positives = 81/101 (80%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID S+P++A+E+N + VQF GI S+ + KL+ G+M I + FRIPY
Sbjct: 1108 ILDTGATTCCIDINSVPKEAIEQNTFLVQFRGINSQQQVDKKLKYGRMTISDHQFRIPYC 1167
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FP+KLG+ IQMILGCNFIR+M GG+RIEGN +TFYKN T
Sbjct: 1168 YAFPLKLGDGIQMILGCNFIRNMYGGLRIEGNTITFYKNVT 1208
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 248 bits (634), Expect = 2e-68
Identities = 113/198 (57%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT A+++FRD RW+ D+SI ATME+DLT+G Q++Y+IPD MMT+
Sbjct: 142 GIVQVRIQILHRQHEGTTALVVFRDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVR 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+QISILT+GY WQNGEANLL+TRG++GRLSNTPNVAFAY++Q + DYL SHG+
Sbjct: 202 DFCRNVQISILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQ 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
ALPGRRYS + ++ + PS I P PT V+++N++DG IS+ F +Y A P
Sbjct: 262 ALPGRRYSAADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPV 321
Query: 941 RYGNNDDKIQSDEENRQI 888
Y +D++I DE+ QI
Sbjct: 322 AYNQHDEEIPPDEDEEQI 339
Score = 137 bits (346), Expect = 1e-30
Identities = 64/101 (63%), Positives = 77/101 (76%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID S+P+ ALE+N + V FSGI SK K++ GKM I + FRIPY
Sbjct: 1202 ILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKPGKMFISEHYFRIPYC 1261
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
YSF M++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK T
Sbjct: 1262 YSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQIT 1302
>gb|ASG91874.1| polyprotein [Cacao swollen shoot virus]
Length = 1846
Score = 248 bits (633), Expect = 3e-68
Identities = 120/208 (57%), Positives = 154/208 (74%), Gaps = 1/208 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQEEGT+A+++FRD RW D+SI A ME+DLT+GSQL++VIPD MMTI
Sbjct: 143 GILQVRIQILHRQEEGTMALVVFRDNRWSGDQSIFAQMEIDLTKGSQLVFVIPDTMMTIG 202
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+Q+SILTRGYE WQNGEANLLITRG+ GRLSNTPNVAFAY++ DYL SHGV
Sbjct: 203 DFARNVQLSILTRGYENWQNGEANLLITRGMTGRLSNTPNVAFAYQIASATDYLASHGVK 262
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
A+ G+R + LRN I+ P R I P QP VE++NL+DG ISI F +Y AA +
Sbjct: 263 AIAGKRMNLQHLRNQQWILRPPRADITPMQPRSVETRNLVDGSISIRFHDYEAATSTSRP 322
Query: 941 RYGNNDDKIQSDEENRQIIATIIVEVQE 858
Y D++++S+ E+ T+ V + E
Sbjct: 323 HYNEEDEEVESETESEIREHTVAVWIGE 350
Score = 133 bits (334), Expect = 4e-29
Identities = 61/101 (60%), Positives = 78/101 (77%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCI+ S+P+ A+E+N + VQF GI S S + KL+ G+M I + FRIPY
Sbjct: 1086 ILDTGATTCCININSVPKTAIEQNTFLVQFRGINSTQSVDKKLKYGRMTISNHQFRIPYC 1145
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
Y+FP+ LG+ I+MILGCNFIR M GG+RIEG+ +TFYKN T
Sbjct: 1146 YAFPLSLGDGIEMILGCNFIRGMYGGLRIEGHTITFYKNVT 1186
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 248 bits (633), Expect = 3e-68
Identities = 112/198 (56%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Frame = -3
Query: 1478 GVMQVRIQILHRQEEGTLAMIIFRDTRWRDDRSIIATMEVDLTRGSQLIYVIPDIMMTIS 1299
G++QVRIQILHRQ EGT A+++FRD RW+ D+SI ATME+DLT+G Q++Y+IPD MMT+
Sbjct: 142 GIVQVRIQILHRQHEGTTALVVFRDNRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVR 201
Query: 1298 DFFKNIQISILTRGYETWQNGEANLLITRGLIGRLSNTPNVAFAYEVQGIVDYLTSHGVN 1119
DF +N+QISILT+GY WQNGEANLL+TRG++GRLSNTPNVAFAY++Q + DYL SHG+
Sbjct: 202 DFCRNVQISILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQ 261
Query: 1118 ALPGRRYSTSQLRNLNLIINPSRI-IEPGQPTEVESQNLLDGRISISFRNYIAANTNRPA 942
ALPGRRYS++ ++ + PS I P PT V+++N++DG IS+ F +Y A P
Sbjct: 262 ALPGRRYSSADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPV 321
Query: 941 RYGNNDDKIQSDEENRQI 888
Y +D+++ DE+ QI
Sbjct: 322 AYNQHDEEVPLDEDEEQI 339
Score = 139 bits (350), Expect = 3e-31
Identities = 65/101 (64%), Positives = 78/101 (77%)
Frame = +1
Query: 22 ILDTGATTCCIDRTSIPEKALEKNLYEVQFSGITSKTSTNLKLRSGKMIIGRNTFRIPYT 201
ILDTGATTCCID S+P+ ALE+N + V FSGI SK KL++GKM I + FRIPY
Sbjct: 1193 ILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYC 1252
Query: 202 YSFPMKLGESIQMILGCNFIRSMKGGVRIEGNLVTFYKNYT 324
YSF M++G+ IQ+ILGCNFIRSM GGVR+EGN +TFYK T
Sbjct: 1253 YSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQIT 1293