BLASTX nr result
ID: Cheilocostus21_contig00014741
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00014741
(7319 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 1010 0.0
gb|OTG13256.1| putative reverse transcriptase domain-containing ... 978 0.0
ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprot... 971 0.0
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom... 966 0.0
gb|PKA61057.1| putative mitochondrial protein [Apostasia shenzhe... 952 0.0
gb|PKU84723.1| putative mitochondrial protein [Dendrobium catena... 945 0.0
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom... 933 0.0
gb|OTG20186.1| putative reverse transcriptase domain-containing ... 951 0.0
gb|OTG11107.1| putative reverse transcriptase domain-containing ... 951 0.0
gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum] 956 0.0
gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum] 949 0.0
gb|OTG11106.1| putative reverse transcriptase domain-containing ... 944 0.0
gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum] 941 0.0
gb|PKU81761.1| RNA-directed DNA polymerase [Dendrobium catenatum] 943 0.0
gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum] 939 0.0
gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum] 926 0.0
gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum] 935 0.0
gb|PKU83407.1| RNA-directed DNA polymerase [Dendrobium catenatum] 916 0.0
gb|PKU87496.1| RNA-directed DNA polymerase [Dendrobium catenatum] 914 0.0
gb|OWM74668.1| hypothetical protein CDL15_Pgr005248 [Punica gran... 931 0.0
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 1010 bits (2611), Expect = 0.0
Identities = 494/903 (54%), Positives = 643/903 (71%), Gaps = 17/903 (1%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQVDELL KGFIRESLSPC VP LLTPKKDG+WRMC+D RAINKI +K FPIPRLDD+L
Sbjct: 641 RQVDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDML 700
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
DM+ GS F+K+DLRSGYHQ+RIR GDEWKT+FKT DGLYEWLVMPFGLTNAPSTFMR+M
Sbjct: 701 DMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIM 760
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
QVLKP+IG+F+VVYFDDILI+S + ++H +HL+ + L+ EK ++N+KKC FM+ V
Sbjct: 761 TQVLKPFIGRFVVVYFDDILIYSRSCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVV 820
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGF+++ G++ DP KIKAIVDWP PT I EV SFHG+ATFYRRFI FS+I+APIT C
Sbjct: 821 FLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITEC 880
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
++ F W +A +AF E+K ++ + P+LRLP+F KVF V CDA VGIG LSQ+GHP+
Sbjct: 881 MKPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPV 940
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
FFSEKLN +++YSTYD EFYAV+Q+++HW+HYL +KEF+L SDH+AL YLNSQ KLN
Sbjct: 941 AFFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNS 1000
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHAKW FLQ +TF LKH +G +NKVADALSR+ GFE L+ Y DF
Sbjct: 1001 RHAKWSSFLQLFTFNLKHCAGIENKVADALSRKALLLVNMSTTTIGFEELKHCYDNDADF 1060
Query: 3226 NKIFNDI---SENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRD 3056
+++ + S+ +C+ D+ I +GYLF ++LC+PRTSLR+ +IWE+HGGG GH GRD
Sbjct: 1061 GDVYSSLLSGSKATCI--DFQILEGYLFYKNRLCLPRTSLRDHVIWELHGGGMGGHFGRD 1118
Query: 3055 KTLTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFV 2876
KT+ L E+RF+WP+L KDV K++ C+ CQ+ K KQNTGLYTPLP+P PW+DLSMDFV
Sbjct: 1119 KTIALVEDRFFWPSLKKDVWKVIKQCRACQVGKGSKQNTGLYTPLPVPSKPWEDLSMDFV 1178
Query: 2875 IGLPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDR 2696
+GLPRT DSI+VVVDRFSKMAHFIPC K +DAS+VA LFFKE+VRLHGLP +IVSDR
Sbjct: 1179 LGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKASDASYVAALFFKEVVRLHGLPQSIVSDR 1238
Query: 2695 DTKFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLL 2516
D ++ NR+LGN+LRC+V + WD L
Sbjct: 1239 D---------------------------------KLSNRSLGNLLRCIVRDQLRKWDNXL 1265
Query: 2515 PTAEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNE 2336
P AEFAFNS+ NRTTG+SPF++ G +P++P+DL PLPT +TSQ FA+HI IH +
Sbjct: 1266 PQAEFAFNSSTNRTTGYSPFEVAYGLKPKQPVDLIPLPTSVRTSQDGDAFARHIRDIHEK 1325
Query: 2335 VKNHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKK 2159
V+ I +SN Y+ AA+ H+R + F+EGDLV+ R R ER + KLQAK PFR+ K
Sbjct: 1326 VREKIKISNENYKEAADAHRRYIQFQEGDLVMVRLRPERFHPSTYQKLQAKKAGPFRVLK 1385
Query: 2158 KINDNAYTLDLPAKMDIHPTVNVEDLTLY-------KEPIHIEEP--AKDANEVKAIISE 2006
++ +NAY L+LP+ + P NVEDL +Y E + ++ P E++ ++ +
Sbjct: 1386 RLGENAYLLELPSNLHFSPIFNVEDLHIYHGHHNDVSEELDLQLPPTLSPRPEIEYVLDD 1445
Query: 2005 QQKFTKQGVNNHYLVQW--KDYTE-SWIPEEELQQFAPELLKDFKLSSPVE-NSLTPGKA 1838
Q T+QG +LV+W K ++E +WI + Q+ P+L + ++ S+ E +S PG+
Sbjct: 1446 QLVSTRQGGYQKFLVKWRGKPHSENTWITTTDFQKINPDLYELYQASNSSEPSSFKPGRI 1505
Query: 1837 DAG 1829
D G
Sbjct: 1506 DGG 1508
Score = 154 bits (389), Expect = 2e-33
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 10/295 (3%)
Frame = -3
Query: 5388 CFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAPEYNSEEEPIDPIMA---- 5221
CFK GH A C E+ Y + SEE M
Sbjct: 327 CFKCGGHGHYAVVCPTKGLHFCVEEPESELESYLKKEETYNEDEVSEECDYYDGMTEGHS 386
Query: 5220 -VVR--CSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALIL 5050
VVR +I K EDW+R S+F T C+G++C ++ID GSSLN+ S+ K L
Sbjct: 387 LVVRPLLTIPKVKGEEDWRRISIFQTRISCHGRLCTMIIDGGSSLNIASQELVEKLNLKT 446
Query: 5049 ENHPKPYNISWVDQTHVPVAHRCCVPLQL-SSYSGHVWCDVANMDVADILLGRPWLYDLD 4873
E HP P+ ++WV+ T +PV+ RC V + VWC+V + V+ ILLGRPWL+D
Sbjct: 447 ERHPNPFRVAWVNDTSIPVSFRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPWLFDRK 506
Query: 4872 VTHRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQET 4693
V H G N Y +HNG+K L P +E+ + + K +++ Q F ES+ET
Sbjct: 507 VQHDGYENTYALIHNGRKKILRPM--KEVPPIKKSNENAQPKKVLTMCQ---FENESKET 561
Query: 4692 GIIYSLVCKQTDE--ASVSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
+I++L+ ++ +E E P ++L+++ ++ R IQHAID
Sbjct: 562 XVIFALMARKVEEFKEQDKEYPANARKILDDFSDLWPVELPNELPPMRDIQHAID 616
Score = 135 bits (339), Expect = 1e-27
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 25/265 (9%)
Frame = -1
Query: 6269 EDDALKSLRMTPPIFEGSTDTQGYLDWQILIEQYFECYAIPEKSKVKYAKFLLRGSTQLY 6090
+DD K +R+ F G + +LDW + +E YF+ YA+PE KV++ K L+G+ +L+
Sbjct: 81 DDDVTKKVRLEVAEFYGKLNPTAFLDWIMSMEDYFDWYAMPENRKVRFVKAKLKGAARLW 140
Query: 6089 WGSVERQMERRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKL 5910
W ++E Q R PI++W+ MKLK+ E ++ Y Q +Y +L L QG +V EY +
Sbjct: 141 WHNIENQAHRTGQPPIDTWDEMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEF 200
Query: 5909 DNLLIQCDLNEEPWVTVSRFKGGLRPEIKRALMYHPIDNIHDAYQLACEIEYEMK----- 5745
L I+ + E +R+K GLR EI+ ++ + D YQLA +IE +K
Sbjct: 201 HELSIRNQVXESDAQLAARYKAGLRMEIQLEMIAAHTYTVDDVYQLALKIEEGLKFRVSR 260
Query: 5744 ------QSRYSQLVPKNPINTKTLGPRGH---------SSNISNSSVPNTQKSISLPNKV 5610
S +S P++T H +SN+++ + + S+S ++
Sbjct: 261 HPSSQIGSTFSNRTTSKPLSTSNFRTSIHVNGGDNTQPTSNVAHQNGNKGKNSMSNGDRK 320
Query: 5609 T-----CFKCSQPGHLARDCKKKTL 5550
CFKC GH A C K L
Sbjct: 321 VDATPLCFKCGGHGHYAVVCPTKGL 345
>gb|OTG13256.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1444
Score = 978 bits (2528), Expect = 0.0
Identities = 470/804 (58%), Positives = 595/804 (74%), Gaps = 1/804 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV ELL+KG IRES+SPCAVP LL PK G +RMCID RA+NKI +K FPIPR +DLL
Sbjct: 611 RQVTELLDKGLIRESMSPCAVPALLVPKPGGAYRMCIDSRAVNKITIKYRFPIPRFEDLL 670
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + GS+ F+K+DLRSGYHQ+R+R GDEWKTAFKT DGLYEW+VMPFGL+NAPSTFMRLM
Sbjct: 671 DHLYGSSVFSKIDLRSGYHQIRMRPGDEWKTAFKTRDGLYEWMVMPFGLSNAPSTFMRLM 730
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
N V K IG +VVYFDDIL+FS + +H+ HL+ IL+ +KL+ N KC F++ EV
Sbjct: 731 NHVFKALIGHCVVVYFDDILVFSQDIRQHLLHLRQVFTILRDQKLYANRAKCHFLSPEVL 790
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLG++I+++G++ D +K++AI WPTPT+I EV SFHGLA+FYRRFI FS+IVAPITNC
Sbjct: 791 FLGYLISENGIRMDESKVEAITAWPTPTSIHEVRSFHGLASFYRRFIKNFSSIVAPITNC 850
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+ F W P+A AF ELK R+T APVL LPNF F V+CDA G GIGG LSQ PI
Sbjct: 851 LKGNNFAWTPAATIAFEELKKRVTQAPVLALPNFQLPFQVECDASGFGIGGVLSQANRPI 910
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
FFSEKL+ +Q+YSTYDKEFYA+I+SL++WRHYL+ EF+L SDHQAL ++N Q KLNP
Sbjct: 911 AFFSEKLSEAKQKYSTYDKEFYAIIRSLEYWRHYLLPGEFVLYSDHQALRFINGQHKLNP 970
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHAKW+E+LQ+++FV++HK+GT N VADALSRR GF+ R Y PDF
Sbjct: 971 RHAKWVEYLQEFSFVIRHKAGTSNTVADALSRRRALLTSLQLQVEGFDIFRGLYVDDPDF 1030
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
++ + S + YS++DG+LF+S++LC+P+ SLR+ +I E H GG AGH GR KTL
Sbjct: 1031 SEAWK--SCQTAPTKGYSVQDGFLFRSNQLCVPKCSLRDAIILESHQGGLAGHFGRGKTL 1088
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
+ERFYWP +S DVA+++ C+TC ++KTQ N GLYTPLP+P GPW+D+S+DFV+GL
Sbjct: 1089 KFVQERFYWPKMSTDVARVIDRCRTCHVAKTQHSNAGLYTPLPVPNGPWEDVSLDFVVGL 1148
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT DSI VVVDRFSKM+HF+PCSKT DAS VARL+F EIV+LHG+P ++ SDRD K
Sbjct: 1149 PRTQRQKDSIMVVVDRFSKMSHFVPCSKTYDASQVARLYFAEIVKLHGVPKSLTSDRDVK 1208
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
FV HFW TLWK LG++L+FS+ +HPQSDGQTEV NR+LGN+LR LVG +P WD +LP A
Sbjct: 1209 FVGHFWRTLWKRLGSRLHFSSAHHPQSDGQTEVTNRSLGNLLRSLVGNNPRQWDIVLPQA 1268
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFA+N + +R+TG SPF + G P P+DLAPLPT S + I IH +V+
Sbjct: 1269 EFAYNRSTHRSTGMSPFLVVYGRNPFTPLDLAPLPTTEHFSVEGEERSAQIKMIHKQVRE 1328
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
I +N+ YQ AN H+R+V F EGDLV K R GG KLQ + PFR+ K+IN
Sbjct: 1329 QIENNNIVYQRRANVHRRRVVFNEGDLVWIHLSKARFPGGRFGKLQPRADGPFRVLKRIN 1388
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLT 2078
DNAY +DLP ++ T NV DL+
Sbjct: 1389 DNAYKIDLPGHYNVSATFNVADLS 1412
Score = 130 bits (327), Expect = 3e-26
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Frame = -3
Query: 5178 WKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENHPKPYNISWVDQTHV 4999
W R ++F T GKVC ++ID GS N+++ + K L LE HP PY ++W+ + +V
Sbjct: 381 WLRNNIFRTKCTSKGKVCTVIIDGGSCENMVATSMVDKLGLKLEPHPDPYQLTWLKKGNV 440
Query: 4998 -PVAHRCCVPLQLSS-YSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNG 4825
V HRC V + + YS VWC+V MD +LLGRPW YD TH G N Y F +G
Sbjct: 441 VKVTHRCLVQFSIGTRYSDEVWCEVIPMDACHVLLGRPWQYDRQTTHDGFKNTYSFRKDG 500
Query: 4824 KKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGIIYSLVCKQTDEASV 4645
ITL P RE + +A TK+ L F K ++ ++Y+L+ + + +
Sbjct: 501 VNITLAPLDVRE-----TTTEAFILTKSAFL----DFTKHTKPP-LLYTLMIVEQNNPT- 549
Query: 4644 SETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
+ P EV LL+E++E+ R +QH ID
Sbjct: 550 GDVPGEVQPLLDEFKEVFPDEIPAGLPLIRDVQHCID 586
Score = 112 bits (279), Expect = 1e-20
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 15/249 (6%)
Frame = -1
Query: 6248 LRMTPPIFEGSTDTQGYLDWQILIEQYFECYAIPEKSKVKYAKFLLRGSTQLYWGSVERQ 6069
+++ P F+G ++DW +E+ F+ I +K KVK LR L+W V+++
Sbjct: 89 IKVEIPEFDGRAQPDEFIDWLSTVERVFDLKDISDKFKVKLVAIKLRKYASLWWDHVKKK 148
Query: 6068 MERRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQC 5889
+ + +W+ MK L EK++ +YRQ + + L Q TV + + D L ++C
Sbjct: 149 RAQDRKSKVETWDKMKKLLCEKFLPVNYRQDAFLEYHDLSQRTSTVEDLIADFDRLRMRC 208
Query: 5888 DLNEEPWVTVSRFKGGLRPEIKRALMYHPIDNIHDAYQLACEIEYEMKQSRYSQLVPKNP 5709
+ E+ ++RF G LRPEI + P +D +L+ ++E QL KN
Sbjct: 209 GVEEQEEQLIARFLGALRPEIADIVQLQPYWTFNDVCRLSLKVE--------KQLKAKNK 260
Query: 5708 INTKTLGP-RGHSSNISNSSVPNTQ-------------KSISLPNKVT-CFKCSQPGHLA 5574
L P + +S I +S P T+ S P+K++ CFKC GH A
Sbjct: 261 SMPSKLSPTKAEASRIQTNSSPGTKLSPIKADFSGGPTSSSPTPSKMSRCFKCHGLGHFA 320
Query: 5573 RDCKKKTLL 5547
R+C K L+
Sbjct: 321 RECPNKHLV 329
>ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein isoform X1 [Daucus
carota subsp. sativus]
Length = 1415
Score = 971 bits (2509), Expect(2) = 0.0
Identities = 469/808 (58%), Positives = 591/808 (73%), Gaps = 2/808 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+E + KG IRESLSPCAVP LLTPKKDGTWRMC+D RAINKI VK +PIPR +DLL
Sbjct: 608 RQVEEAIAKGLIRESLSPCAVPALLTPKKDGTWRMCVDSRAINKITVKYRYPIPRFEDLL 667
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D ++G+ F+K+DLRSGYHQ+RIR GDEWKTAFKT DGLYEWLVMPFGL+NAPSTFMR+M
Sbjct: 668 DQLAGAKIFSKIDLRSGYHQIRIRPGDEWKTAFKTRDGLYEWLVMPFGLSNAPSTFMRVM 727
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
N VLKP++ + +VVYFDDILI+S + H + L+ E L++EKL++N+KKC F + V
Sbjct: 728 NHVLKPFLRRCVVVYFDDILIYSPTLEAHKQDLKEVFESLRQEKLYINLKKCNFAVHNVL 787
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLG+II+D G+K D K++AI+DWPTP TI EV SFHGLA+FYRRFI FS++VAPIT+C
Sbjct: 788 FLGYIISDQGVKVDQTKVQAILDWPTPRTIHEVRSFHGLASFYRRFIRNFSSLVAPITDC 847
Query: 3766 LQK-KTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHP 3590
++ KT W AE +F +K +I++APVL LP+F KVF VDCDA VGIG LSQ+G P
Sbjct: 848 IKSVKTLSWTQEAEESFQLIKRKISAAPVLALPDFDKVFEVDCDASKVGIGAVLSQEGRP 907
Query: 3589 ITFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLN 3410
I F+SEKL R YSTYD EFYA+IQ+LKHW HYL+ +EFILNSDH+AL ++NSQ L+
Sbjct: 908 IAFYSEKLTGSRCHYSTYDAEFYAIIQALKHWEHYLVQREFILNSDHEALKFINSQQHLS 967
Query: 3409 PRHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPD 3230
RHAKW+ FLQ++TF ++HK+G QNKVADALSR+ GF+ +D YA
Sbjct: 968 QRHAKWVSFLQRFTFTIRHKAGIQNKVADALSRKASFLTEMRVEVEGFDTFKDLYADDKF 1027
Query: 3229 FNKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKT 3050
F IF I + H +Y +++G+LFK +LCIP SLR ++ E H + GH GRDKT
Sbjct: 1028 FGPIFQAILQGE--HSEYQLQEGFLFKGLQLCIPECSLREKIVMEKH---ALGHFGRDKT 1082
Query: 3049 LTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIG 2870
+ L E +++WP L +DV + V C TCQ SK N GLYTPLPIP PW D+SMDFV+G
Sbjct: 1083 VALIENKYFWPKLKRDVTRHVERCHTCQRSKGGSTNAGLYTPLPIPSFPWNDVSMDFVVG 1142
Query: 2869 LPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDT 2690
LPRT DS+ VVVDR+SKMAHF+PC K DASHVA L+FKEI RLHG+P +I SDRDT
Sbjct: 1143 LPRTQKRTDSVMVVVDRYSKMAHFVPCRKAMDASHVAELYFKEIFRLHGVPRSITSDRDT 1202
Query: 2689 KFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPT 2510
KF+ HFW TLWK +GT+L FST YHP++DGQTEVVNR+LGN+LRC G+ P WD +LP
Sbjct: 1203 KFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLGNLLRCFAGDKPKQWDLVLPF 1262
Query: 2509 AEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVK 2330
AEFA+N++ NRTT SPF++ G P +DLAP+P P K S A + I +IH +V+
Sbjct: 1263 AEFAYNNSKNRTTQLSPFEVVGGLSPNTVLDLAPIPNPKKASAKAEEMVERIKEIHEQVR 1322
Query: 2329 NHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKI 2153
+HI SNLKY+ AA+ H+R+V FKEGD V K+R G NHKL + + P +I K++
Sbjct: 1323 DHIEASNLKYKAAADIHRRKVIFKEGDNVWAVLTKDRFLPGENHKLHDRKVGPCKILKRV 1382
Query: 2152 NDNAYTLDLPAKMDIHPTVNVEDLTLYK 2069
NDNAY L LP+ + NV+ L YK
Sbjct: 1383 NDNAYQLKLPSHIKSSDVFNVKHLLPYK 1410
Score = 166 bits (420), Expect(2) = 0.0
Identities = 107/314 (34%), Positives = 153/314 (48%), Gaps = 11/314 (3%)
Frame = -3
Query: 5442 NYSVPNTQKSISLPNKVTCFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAP 5263
N S T ++ S + CFK ++PGH + C Y
Sbjct: 284 NMSESTTPQNKSKGTGLKCFKCNEPGHTSAACRRERGKQLMIGGEEHSQRAE-----YEE 338
Query: 5262 EYNSEEEPIDPIM-------AVVRCSIL--KEIPAEDWKRTSLFYTYTKCNGKVCKIVID 5110
E + EP + ++ V+R ++L KE P EDW R ++F+T GKVCK++ID
Sbjct: 339 EPIYDTEPEEDVLYGDVGESLVIRKALLLPKEEPKEDWLRNNIFHTTCTIEGKVCKLIID 398
Query: 5109 SGSSLNVISKAASTKFALILENHPKPYNISWVDQ-THVPVAHRCCVPLQLS-SYSGHVWC 4936
SGS NVIS+ A K L E HPKPY +SW + V V RC V + Y +VWC
Sbjct: 399 SGSCENVISREAVDKLKLKQEKHPKPYKLSWFKKGNEVSVDTRCLVSFSIGRKYFDNVWC 458
Query: 4935 DVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAI 4756
DV MD ILLGRPW YD + H G+ N Y F + K+TL P + ++GK
Sbjct: 459 DVVKMDACHILLGRPWQYDRNAIHEGKKNTYTFWKDNIKVTLAPMKDK----VSAEGK-- 512
Query: 4755 ERTKTISLLQAQPFMKESQETGIIYSLVCKQTDEASVSETPPEVLRLLEEYQEITXXXXX 4576
+ ++L FM++++ETGI +LV ++ ++ P + LLEEY+++T
Sbjct: 513 -KENGDNMLSITNFMEKAEETGIFMALVMREVQPP--TQVPDFIKPLLEEYKDLTPEELP 569
Query: 4575 XXXXXERSIQHAID 4534
R IQH ID
Sbjct: 570 PGLPPMRDIQHQID 583
Score = 127 bits (318), Expect = 4e-25
Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 7/233 (3%)
Frame = -1
Query: 6233 PIFEGSTDTQGYLDWQILIEQYFECYAIPEKSKVKYAKFLLRGSTQLYWGSVERQMERRS 6054
P F GS + ++DW +E+ FE +PE KVK L+G +W ++ + ERR
Sbjct: 86 PEFSGSIQAEEFVDWLNTVERIFEFKEVPENMKVKLVAIKLKGRASAWWEQLKLKRERRG 145
Query: 6053 LEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQCDLNEE 5874
I WE MK KL E ++ +Y Q ++ +L L QG+ +V +Y + L+ + DL+E
Sbjct: 146 KSKIVDWEKMKKKLKENFLPHNYVQAMFQRLQNLRQGSRSVDDYTEEFYQLISRNDLSES 205
Query: 5873 PWVTVSRFKGGLRPEIKRALMYHPIDNIHDAYQLACEIEYEMKQSRY----SQLVPKN-- 5712
V+R+ GGLR ++ AL H ++ + YQ A +E + R+ SQ + N
Sbjct: 206 EEQLVARYLGGLRLNVQEALDLHKFWSVSEVYQAALAVEKRQNKPRFWNSQSQDMTANQR 265
Query: 5711 -PINTKTLGPRGHSSNISNSSVPNTQKSISLPNKVTCFKCSQPGHLARDCKKK 5556
I+ + G + + N S T ++ S + CFKC++PGH + C+++
Sbjct: 266 FSIDNQAKGSQNTTMPRKNMSESTTPQNKSKGTGLKCFKCNEPGHTSAACRRE 318
>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1452
Score = 966 bits (2496), Expect(2) = 0.0
Identities = 470/895 (52%), Positives = 641/895 (71%), Gaps = 17/895 (1%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+EL KG +RES SPCA P LL PKKDG+WRMC+D RAINKI +K FPIPRLD++L
Sbjct: 559 RQVEELFEKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEML 618
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + GS F+K+DL+SGYHQ+R+R+GDEWKTAFKT DGL+EWLVMPFGL+NAPSTFMR+M
Sbjct: 619 DQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVM 678
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
+VLKP++ F+VVYFDDILI+S+ K++H+KHL+ LE+L+KE+L++N+KKC FM EV
Sbjct: 679 AEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVV 738
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGFI++ GLK DP KI+AI +WP PT+I EV SFHGLA+FYRRFI FS+I++PIT
Sbjct: 739 FLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITES 798
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+K FEW+ SA++AF +K +T APVL LP+F K+F+V+CDA VGIG LSQ G PI
Sbjct: 799 LKKDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPI 858
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
FFSEKL R+RYSTYD EFYA++++++HW+HYL ++EF + SDHQAL YL+SQ KL+
Sbjct: 859 EFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSN 918
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
+HAKW FL ++ F LK+KSG N VADALSRR TGFE L+++Y+ F
Sbjct: 919 QHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYF 978
Query: 3226 NKIFNDISEN-SCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKT 3050
+KI D+ + + Y + + YLFK ++LCIP SLR +I E+HG G GH GRDKT
Sbjct: 979 SKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKT 1038
Query: 3049 LTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIG 2870
L + +R+YWP + +DV ++V C C K QNTGLY PLP P+ PW LSMDFV+G
Sbjct: 1039 LVMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLG 1098
Query: 2869 LPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDT 2690
LP+T+ DSI+VVVDRFSKMAHFIPC +T+DA+H+A LFF+EIV LHG+P +IVSDR
Sbjct: 1099 LPKTTKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVILHGIPTSIVSDRHV 1158
Query: 2689 KFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPT 2510
KF+ +FW TLW+ GT+L +S+T HPQ+DGQTEVVNR+LGN+LRCL+ +P WD ++P
Sbjct: 1159 KFMGYFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQ 1218
Query: 2509 AEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVK 2330
AEFA+N+++NR+ +PF+ G +P+ +DL PLP + S FA I KIH EVK
Sbjct: 1219 AEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADQIRKIHEEVK 1278
Query: 2329 NHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKI 2153
+ SN +Y AN H+R+ F+EGD V+ R+ER +G HKL+++ P ++ KKI
Sbjct: 1279 AALKASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKI 1338
Query: 2152 NDNAYTLDLPAKMDIHPTVNVEDL-----------TLYKEPIHIEEPAKDANEVKAIISE 2006
+ NAY ++LP ++ I+P N+ DL T+ + H+ P ++ +++
Sbjct: 1339 SSNAYLIELPPELQINPIFNILDLYPFDGCDGTASTIDAQIQHL--PIAKVEVIEDVLNV 1396
Query: 2005 QQKFTKQG-VNNHYLVQW--KDYTES-WIPEEELQQFAPELLKDFKLSSPVENSL 1853
++ +++G + +LV+W K ES WI EEEL++ P++ +++ + E+SL
Sbjct: 1397 KEVRSRRGNPHRRFLVKWLGKPANESTWIAEEELKRVDPDIYEEYVKAYSSESSL 1451
Score = 166 bits (420), Expect(2) = 0.0
Identities = 103/255 (40%), Positives = 133/255 (52%), Gaps = 12/255 (4%)
Frame = -3
Query: 5262 EYNSEEEPIDPIMAVVRCSILKEI-------PAEDWKRTSLFYTYTKCNGKVCKIVIDSG 5104
EY E E ID A +++ I AEDWKR S+F T C GKVC +VID G
Sbjct: 285 EYKEEVEEIDVYPAQGESLVVRRIMTTTVNEEAEDWKRRSIFRTRVVCEGKVCDLVIDGG 344
Query: 5103 SSLNVISKAASTKFALILENHPKPYNISWVDQTH-VPVAHRCCVPLQLSSYS-GHVWCDV 4930
S N+ISK A K L HP PY I W+ + H VPV +C V + S CDV
Sbjct: 345 SMENIISKEAVNKLKLPTNKHPYPYKIGWLKKGHEVPVTTQCLVKFTMGDNSDDEALCDV 404
Query: 4929 ANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIER 4750
MDV IL+GRPWLYD D+ H+ + N Y F N K+ TL P +R K +
Sbjct: 405 VPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYP-----LREETKKSANHKI 459
Query: 4749 TKTISLLQAQPFMKESQETGIIYSLVCK--QTDEASVS-ETPPEVLRLLEEYQEITXXXX 4579
+K L A+ F E E GI+Y+LV K ++D+ S S + P E+ +LL+E+ E+
Sbjct: 460 SKITRYLSAENFEAEGSEMGIMYALVTKHLKSDQMSKSPQYPTEIQQLLKEFGELFNEDL 519
Query: 4578 XXXXXXERSIQHAID 4534
RSIQHAID
Sbjct: 520 PKSLPPLRSIQHAID 534
>gb|PKA61057.1| putative mitochondrial protein [Apostasia shenzhenica]
Length = 829
Score = 952 bits (2460), Expect = 0.0
Identities = 449/749 (59%), Positives = 567/749 (75%), Gaps = 2/749 (0%)
Frame = -2
Query: 4303 MISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLMN 4124
M++G+ F+K+DLRSGYHQ+R+REGDEWKTAFKT DGLYEWLVMPFG +NAPSTFMR+M
Sbjct: 1 MMAGARIFSKIDLRSGYHQIRVREGDEWKTAFKTKDGLYEWLVMPFGFSNAPSTFMRVMT 60
Query: 4123 QVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVEF 3944
Q+L+P+IG FL+VYFDDILI++ + EH+ HL+ +L++EKL++N+KKC FM + + F
Sbjct: 61 QILRPFIGVFLIVYFDDILIYTRSMKEHLDHLREVFVVLRREKLYVNLKKCHFMTDSICF 120
Query: 3943 LGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNCL 3764
LGFI++ G+ ADP+KI AI +WPTP +I +V SFHGLATFYRRFI GFS+I AP+T+CL
Sbjct: 121 LGFIVSCKGVSADPSKISAIQEWPTPKSIHDVRSFHGLATFYRRFIKGFSSITAPLTDCL 180
Query: 3763 QKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPIT 3584
+ K F+W +A+RAF E+K R+T APVLRLP+F KVF V CDA GVGIGG LSQ+GHPI
Sbjct: 181 KGKEFQWASAADRAFREIKARLTEAPVLRLPDFGKVFEVACDASGVGIGGVLSQEGHPIA 240
Query: 3583 FFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNPR 3404
+FSEKLN RQRYSTYDKEFYAV+Q+L++WRHYLI EF+L SDHQAL YLNSQ L+ R
Sbjct: 241 YFSEKLNEARQRYSTYDKEFYAVVQTLRYWRHYLIAAEFVLYSDHQALKYLNSQKNLSAR 300
Query: 3403 HAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDFN 3224
HAKW FLQ+YTFVLKHK+G NK ADALSR GF+ ++ EY C DF
Sbjct: 301 HAKWAAFLQEYTFVLKHKAGIDNKPADALSRMTVILHAMRVQVIGFDVMKSEYVDCKDFG 360
Query: 3223 KIFNDISE-NSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
+ + + S DY I++GYLF+ +LCIP +SLR FLI E+H G+AGH GRDKT
Sbjct: 361 STYTRLLKVPSQSDSDYLIREGYLFRGPRLCIPDSSLREFLIQELHSSGAAGHFGRDKTA 420
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L +R+YWP KDV ++V C+TCQ++K KQNTGLYTPLPIP+ PW+DLSMDFV+GL
Sbjct: 421 ALVSDRYYWPRQLKDVTRVVSRCRTCQVAKGGKQNTGLYTPLPIPDRPWEDLSMDFVLGL 480
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRTS H I VVVDRFSKMAHFIPCSKT+DASH+A LF EIVRLHGLP ++VSDRD K
Sbjct: 481 PRTSRRHGCILVVVDRFSKMAHFIPCSKTSDASHIATLFVAEIVRLHGLPKSMVSDRDVK 540
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+S+FW TLWK LGTKL +ST YHPQ+DGQTEVVNR+LGN+LRCLVGE P +WD +L A
Sbjct: 541 FMSYFWKTLWKKLGTKLLYSTAYHPQTDGQTEVVNRSLGNLLRCLVGERPSSWDLILHVA 600
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EF +N+++NR+TG SPF++ GY PR PIDL LP ++T++ A TFA H+ ++H +++
Sbjct: 601 EFTYNNSVNRSTGMSPFRVVTGYDPRLPIDLVDLPLTYRTNELASTFASHLHELHEDIRR 660
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKIN 2150
+A+ K + + H+R F+ G V+ R R G KL A+ M PF++ KKI
Sbjct: 661 KLALQYDKVKAEVDRHRRFTHFEVGSEVMIRVHPGRFPMGAQKKLAARRMGPFKVLKKIG 720
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLYKEP 2063
+NAY LDLP +M I P NV DL+ Y EP
Sbjct: 721 ENAYELDLPLEMGISPIFNVSDLSPYNEP 749
>gb|PKU84723.1| putative mitochondrial protein [Dendrobium catenatum]
Length = 1067
Score = 945 bits (2442), Expect = 0.0
Identities = 462/809 (57%), Positives = 587/809 (72%), Gaps = 2/809 (0%)
Frame = -2
Query: 4483 QVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLLD 4304
QVDELL KGF+R S SPCAVP LL PKKDGT+RMCID R INKI +K FPIPR+DD+ D
Sbjct: 254 QVDELLLKGFVRPSASPCAVPALLVPKKDGTFRMCIDSRTINKITIKYRFPIPRIDDIFD 313
Query: 4303 MISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLMN 4124
+ G+ F+K+DLRSGYHQ+RIR GDEWKTAFKT +GLYEW VMPFG++NAPSTFMRLMN
Sbjct: 314 QLHGARVFSKIDLRSGYHQIRIRPGDEWKTAFKTREGLYEWTVMPFGVSNAPSTFMRLMN 373
Query: 4123 QVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVEF 3944
QV +P + K +V+YFDDIL++S++ D H++HL++ L++L++++LF N KKC ++ +++ F
Sbjct: 374 QVFRPLMNKCVVIYFDDILVYSSSVDLHLEHLRSVLDLLREQQLFANPKKCQYLTDKISF 433
Query: 3943 LGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNCL 3764
LGFII+ +G++ADP KI+AIV WPTP ++TEV FHGLA+FYRRFI FS++ AP+T L
Sbjct: 434 LGFIISSAGIEADPHKIEAIVQWPTPRSMTEVRQFHGLASFYRRFIRNFSSVAAPLTELL 493
Query: 3763 QKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPIT 3584
+ + F+WNPSA+ F LK+ I++APVL LP+F+K F +DCDA VGIG LSQ GHPI
Sbjct: 494 KSEPFQWNPSAKEGFERLKEAISTAPVLALPDFNKAFEIDCDASNVGIGAVLSQHGHPIA 553
Query: 3583 FFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNPR 3404
FFSEK N R++YS YDKE YAV+++L HW HYL+ EFIL SDH+AL +LNSQ KL R
Sbjct: 554 FFSEKFNDSRRKYSVYDKELYAVVRALHHWSHYLLPHEFILYSDHEALCFLNSQKKLKGR 613
Query: 3403 HAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDFN 3224
HA W+EFL + +VLKHKSG N+VADALSRR FE L++ Y DF
Sbjct: 614 HAAWVEFLGAFHYVLKHKSGKCNQVADALSRRTALIQVLQTKVIEFELLKELYPADSDFG 673
Query: 3223 KIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTLT 3044
+I++ E + Y + G+LF +KLCIP+ S R +I E H A H GRDKTL
Sbjct: 674 EIWSKCQEKP--YKLYHCQQGHLFHGNKLCIPQGSTRLAIIRECHESSIADHFGRDKTLA 731
Query: 3043 LREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGLP 2864
L +E F+WP LS+DV + + C+ C ++KT Q GLYTPLP+PEGPW ++S+DFV+GLP
Sbjct: 732 LIQEHFFWPLLSRDVDRFLRRCRVCVLAKTHSQKLGLYTPLPVPEGPWLEVSLDFVLGLP 791
Query: 2863 RTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTKF 2684
RT + DSI VVVDRFSKM HFI C+KT DASHVA L+FKEIVRLHG+P TI SDRD KF
Sbjct: 792 RTQRNKDSIMVVVDRFSKMTHFIACNKTLDASHVADLYFKEIVRLHGIPKTITSDRDVKF 851
Query: 2683 VSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTAE 2504
+SHFW T+W LGTKL FS+T HPQ+DGQTE VNR+LGN+LRC VG++ WD +LP E
Sbjct: 852 LSHFWRTIWAKLGTKLLFSSTAHPQTDGQTETVNRSLGNLLRCFVGKNLKQWDLILPQIE 911
Query: 2503 FAFNSAINRTTGFSPFQITLGYQPRKPIDLAP-LPTPFKTSQSALTFAQHILKIHNEVKN 2327
FAFN +IN+ TG SPFQ+ G P P++L P LPT K S + ++ I ++H EV++
Sbjct: 912 FAFNRSINQATGHSPFQVVYGNNPLSPLELIPQLPTQ-KFSTDGVQRSKEIQRLHKEVQD 970
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKIN 2150
I N K Q AN +R + F+ GD V R RKER QG KL+ K PFRI KKI
Sbjct: 971 LIQKHNSKCQKLANRSRRAMHFEVGDQVWIRLRKERFPQGAFSKLKPKADGPFRIVKKIG 1030
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLYKEP 2063
DNAY +DLP +I T NV DL+ Y EP
Sbjct: 1031 DNAYQIDLPGDYNISATFNVADLSPYYEP 1059
Score = 97.1 bits (240), Expect = 4e-16
Identities = 63/202 (31%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Frame = -3
Query: 5388 CFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAPEYNSEEEPI----DPIMA 5221
CFK GH+A +C + V + EEP+ D
Sbjct: 13 CFKCQGFGHIASNCPNRRVVILAEEPEAINYDTSLNDGV------TTEEPVYLQGDEGNL 66
Query: 5220 VVRCSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENH 5041
+V L E W R S+F T +VC ++IDSGS NV++ K L +H
Sbjct: 67 LVLKQSLNVQKGESWLRHSIFRTRCTVKDRVCNVIIDSGSCENVVAATMVDKLQLTTTDH 126
Query: 5040 PKPYNISWVDQT-HVPVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRPWLYDLDVTH 4864
PKPY++SW+ +T V V RC V + + CDV MD +LLGRPW +D
Sbjct: 127 PKPYSLSWIQKTAEVQVNKRCLVDFSIGHFQDQALCDVVPMDACHLLLGRPWQFD----- 181
Query: 4863 RGRSNIYEFMHNGKKITLLPSL 4798
RG +HNG ++ +P L
Sbjct: 182 RGT------LHNGSQVLNIPEL 197
>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 786
Score = 933 bits (2412), Expect = 0.0
Identities = 441/776 (56%), Positives = 580/776 (74%), Gaps = 2/776 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+ELL KG +RES SPCA P LL PKKDG+WRMC+D RAINKI +K FPIPRLD++L
Sbjct: 11 RQVEELLEKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEML 70
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + GS F+K+DL+SGYHQ+R+R+GDEWKTAFKT DGL+EWLVMPFGL+NAPSTFMR+M
Sbjct: 71 DQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVM 130
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
+VLKP++ F+VVYFDDILI+S+ K++H+KHL+ LE+L+KE+L++N+KKC FM EV
Sbjct: 131 AEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVV 190
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGFI++ GLK DP KI+AI +WP PT+I EV SFHGLA+FYRRFI FS+I++PIT
Sbjct: 191 FLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITES 250
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+K FEW+ SA++AF +K +T APVL LP+F K+F+V+CDA VGIG LSQ G PI
Sbjct: 251 LKKDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPI 310
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
FFSEKL R+RYSTYD EFYA++++++HW+HYL ++EF + SDHQAL YL+SQ KL+
Sbjct: 311 EFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSN 370
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
+HAKW FL ++ F LK+KSG N VADALSRR TGFE L+++Y+ F
Sbjct: 371 QHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYF 430
Query: 3226 NKIFNDISEN-SCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKT 3050
+KI D+ + + Y + + YLFK ++LCIP SLR +I E+HG G GH GRDKT
Sbjct: 431 SKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKT 490
Query: 3049 LTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIG 2870
L + +R+YWP + +DV ++V C C K QNTGLY PLP P+ PW LSMDFV+G
Sbjct: 491 LAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLG 550
Query: 2869 LPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDT 2690
LP+T+ DSI+VVVDRFSKMAHFIPC +T++A+H+A LFF+EIVRLHG+P +IVSDRD
Sbjct: 551 LPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSNATHIAELFFREIVRLHGIPTSIVSDRDV 610
Query: 2689 KFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPT 2510
KF+ HFW TLW+ GT+L +S+T HPQ+DGQTEVVNR+LGN+LRCL+ +P WD ++P
Sbjct: 611 KFMGHFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQ 670
Query: 2509 AEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVK 2330
AEFA+N+++NR+ +PF+ G +P+ +DL PLP + S FA HI KIH EVK
Sbjct: 671 AEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADHIRKIHEEVK 730
Query: 2329 NHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRI 2165
+ SN +Y AN H+R+ F+EGD V+ R+ER +G HKL+++ P ++
Sbjct: 731 AALKASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKV 786
>gb|OTG20186.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1465
Score = 951 bits (2457), Expect(2) = 0.0
Identities = 455/806 (56%), Positives = 600/806 (74%), Gaps = 1/806 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+EL++KG +RES+SPCAVP LLTPKKDGTWRMC+D RAINKI V+ FPIPRLDDLL
Sbjct: 613 RQVEELISKGHVRESMSPCAVPALLTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLL 672
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D +SG+ FTKLDL+SGY+Q+R+R GDEWKTAFKT +GLYEWLVMPFGL+NAPSTFMR+M
Sbjct: 673 DQLSGAIIFTKLDLKSGYYQIRLRPGDEWKTAFKTREGLYEWLVMPFGLSNAPSTFMRVM 732
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+L+P+IGKF+VVYFDDILI+S + +H+ H++ L +L++++ + KKCVFM +V
Sbjct: 733 NQLLRPFIGKFVVVYFDDILIYSASFSDHVVHVRQVLALLRRDRFYAATKKCVFMTPKVL 792
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLG++I+ G++ D +K+ A+ +WPTPTTITEV SFHGL +FYRRFI FS+I+AP+T+C
Sbjct: 793 FLGYVISGDGIQVDESKVAAVQNWPTPTTITEVRSFHGLDSFYRRFIPHFSSIMAPVTDC 852
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
++ KTF W AE AF +K+++T+AP+L LPNFS+VF + DA VGIGG LSQ G P+
Sbjct: 853 MKGKTFVWTDEAELAFQVVKEKLTTAPILVLPNFSQVFELHTDASKVGIGGVLSQGGRPV 912
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKL + RYSTYD EFYAV+Q++KHWRHYL HKEF+L +DH +L ++ +Q K++
Sbjct: 913 AYFSEKLTGPKLRYSTYDLEFYAVVQAVKHWRHYLFHKEFVLFTDHDSLRHIRTQDKVSH 972
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
+H +W+ FL+++TFV+KHK+G N+VADALSRR G E +R++ AI P F
Sbjct: 973 KHGRWLAFLEKFTFVVKHKTGVSNRVADALSRRSNLLISMRVDVPGLEVIREQLAIDPYF 1032
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
+ I D+ D+ + DG+LFK ++LCIP +SLR +I E+HG GH GRD+TL
Sbjct: 1033 SVILQDVESGQ--KSDFLLHDGFLFKGNQLCIPDSSLRLKIIKELHG---EGHVGRDRTL 1087
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L + +YWPT+ K+V + V C+ CQISK N GLY PLPIP PW D+SMDFV+GL
Sbjct: 1088 QLVQASYYWPTMRKEVDRYVKRCRVCQISKGTATNAGLYMPLPIPSQPWVDISMDFVLGL 1147
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT +DSI+VVVDRFSKM HFIPC KTTDA +VA+LFF+++ RLHGLP +IVSDRDT+
Sbjct: 1148 PRTQRGNDSIFVVVDRFSKMVHFIPCKKTTDAVNVAQLFFRDVYRLHGLPSSIVSDRDTR 1207
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW +LWK++ T+LNFS+ YHPQ+DGQTEVVNR+LGN+LRCLVG+H WD+ L A
Sbjct: 1208 FLSHFWRSLWKMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHVKAWDQKLCQA 1267
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFA N A+NR+TG+SPFQI QPR P+DL LP + F + + ++HN V +
Sbjct: 1268 EFAHNHAVNRSTGYSPFQIVYSSQPRGPLDLMSLPVSGSVPKKVQDFVEGLHEVHNAVYD 1327
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
H+ +NLKY+ AA+ +R V F+EGD V K+R G + KL AK + P I +KIN
Sbjct: 1328 HLTRANLKYKQAADQKRRHVEFEEGDFVWAVLTKDRFTVGEYNKLSAKKIGPVEIVEKIN 1387
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLY 2072
NAY L LP+ + NV+ L Y
Sbjct: 1388 PNAYRLKLPSHIRCADVFNVKHLLPY 1413
Score = 150 bits (379), Expect(2) = 0.0
Identities = 95/291 (32%), Positives = 136/291 (46%), Gaps = 6/291 (2%)
Frame = -3
Query: 5388 CFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAPEYNSEEE----PIDPIMA 5221
CF + GH +C VY E EEE + +
Sbjct: 310 CFNCGETGHRQAECKRAGKRHLFAESEDEQYEEYENNPVYDEETEYEEEVVTGDVGVNLV 369
Query: 5220 VVRCSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENH 5041
V R + +DW + ++F++ GKVC VIDSGS N+IS+ A K AL E+H
Sbjct: 370 VTRSCYTPKADGDDWLKHNIFHSTCTILGKVCTFVIDSGSCDNLISEEAVQKLALKTESH 429
Query: 5040 PKPYNISWVDQT-HVPVAHRCCVPLQL-SSYSGHVWCDVANMDVADILLGRPWLYDLDVT 4867
PKPY + W+ + V V+ R V + + S+Y V CDV MD +LL RPW Y+ ++
Sbjct: 430 PKPYKLQWLKKGGEVTVSKRALVSISIGSTYKDDVVCDVVPMDACHLLLDRPWEYERNIE 489
Query: 4866 HRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGI 4687
H GRSN Y F+ G KITL+PS P+++ A S +LL F E ++T
Sbjct: 490 HNGRSNTYSFLFGGVKITLVPSKPKQLAAKQSG----------TLLTISQFQDELEDTDS 539
Query: 4686 IYSLVCKQTDEASVSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
++ L+ K E E P ++ LLEE+ ++ R IQH ID
Sbjct: 540 VFVLIGKAVPEE--VEIPDAMVPLLEEFSDVFPVELPDGLPPLRDIQHHID 588
Score = 97.4 bits (241), Expect = 4e-16
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 6/236 (2%)
Frame = -1
Query: 6248 LRMTPPIFEGST-DTQGYLDWQILIEQYFECYAIPEKSKVKYAKFLLRGSTQLYWGSVER 6072
+R+ P F+GS+ + +G++DW +E+ FE +PE +V LRG +W ++
Sbjct: 94 IRVDIPEFDGSSLNPEGFIDWLATVEEVFEYKEVPENKRVALIATRLRGRASAWWQQLKL 153
Query: 6071 QMERRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQ 5892
R I +W MK L ++ ++++ +Y +L L QG +V +Y + L+ +
Sbjct: 154 TRNRLGKSRIVTWTKMKKCLRSNFLPHNFQRLMYQRLQNLKQGAKSVDDYTTEFYQLIAR 213
Query: 5891 CDLNEEPWVTVSRFKGGLRPEIKRAL-MYHPIDNIHDAYQLACEIEYEMKQSRYSQLVPK 5715
D+ E VSR+ GGLR +I A+ ++ P+ I +A+Q A E + + S
Sbjct: 214 NDIQEPEEQLVSRYIGGLRVQIMEAVNLFDPL-TIPEAHQRALAFEKQNRWVGGSFTPAG 272
Query: 5714 NPINTKTLGPRGHSSNI----SNSSVPNTQKSISLPNKVTCFKCSQPGHLARDCKK 5559
+ + + PRG S SN+ + S S P CF C + GH +CK+
Sbjct: 273 GNVGSGSGAPRGGPSQQKPGGSNTGPTSKGASSSGPR---CFNCGETGHRQAECKR 325
>gb|OTG11107.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1465
Score = 951 bits (2459), Expect(2) = 0.0
Identities = 455/806 (56%), Positives = 601/806 (74%), Gaps = 1/806 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+EL++KG +RES+SPCAVP LLTPKKDGTWRMC+D RAINKI V+ FPIPRLDDLL
Sbjct: 613 RQVEELISKGHVRESMSPCAVPALLTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLL 672
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D +SG++ FTKLDL+SGY+Q+R+R GDEWKTAFKT +GLYEWLVMPFGL+NAPSTFMR+M
Sbjct: 673 DQLSGASIFTKLDLKSGYYQIRLRPGDEWKTAFKTREGLYEWLVMPFGLSNAPSTFMRVM 732
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+L+P+IGKF+VVYFDDILI+S + +H+ H++ L +L++++ + KKCVFM +V
Sbjct: 733 NQLLRPFIGKFVVVYFDDILIYSASFSDHVVHVRQVLALLRRDRFYAATKKCVFMTPKVL 792
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLG++I+ G++ D +K+ A+ +WPTPTTITEV SFHGLA+FYRRFI FS+I+AP+T+C
Sbjct: 793 FLGYVISGDGIQVDESKVAAVQNWPTPTTITEVRSFHGLASFYRRFIPHFSSIMAPVTDC 852
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
++ KTF W AE AF +K+++T+AP+L LPNFS+VF + DA VGIGG LSQ G P+
Sbjct: 853 MKGKTFVWTDEAELAFQVVKEKLTTAPILVLPNFSQVFELHTDASKVGIGGVLSQGGRPV 912
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKL + RYSTYD EFYAV+Q++KHWRHYL HKEF+L +DH +L ++ +Q K++
Sbjct: 913 AYFSEKLTGPKLRYSTYDLEFYAVVQAVKHWRHYLFHKEFVLFTDHDSLRHIRTQDKVSH 972
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
+H +W+ FL+++TFV+KHK+G N+VADALSRR G E +R++ AI P F
Sbjct: 973 KHGRWLAFLEKFTFVVKHKTGVSNRVADALSRRSNLLVSMRVDVPGLEVIREQLAIDPYF 1032
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
+ I D+ D+ + DG+LFK ++LCIP +SLR +I E+HG GH GRD+TL
Sbjct: 1033 SVILQDVESGQ--KSDFLLHDGFLFKGNQLCIPDSSLRLKIIKELHG---EGHVGRDRTL 1087
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L + +YWPT+ K+V + V C+ CQ+SK N GLY PLPIP PW D+SMDFV+GL
Sbjct: 1088 QLVQASYYWPTMRKEVDRYVKRCRVCQVSKGTATNAGLYMPLPIPSQPWVDISMDFVLGL 1147
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT +DSI+VVVDRFSKM HFIPC KTTDA +VA+LFF+++ RLHGLP +IVSDRDT+
Sbjct: 1148 PRTQRGNDSIFVVVDRFSKMVHFIPCKKTTDAVNVAQLFFRDVYRLHGLPSSIVSDRDTR 1207
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW +LWK++ T+LNFS+ YHPQ+DGQTEVVNR+LGN+LRCLVG+H WD+ L A
Sbjct: 1208 FLSHFWRSLWKMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGDHVKAWDQKLCQA 1267
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFA N A NR+TG+SPFQI QPR P+DL LP + F + + ++HN V +
Sbjct: 1268 EFAHNHADNRSTGYSPFQIVYSSQPRGPLDLMSLPVSGSVPKKVQDFVEGLREVHNAVYD 1327
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
H+ +NLKY+ AA+ +R V F+EGD V K+R G + KL AK + P I +KIN
Sbjct: 1328 HLTRANLKYKQAADQKRRHVEFEEGDFVWAVLTKDRFTVGEYNKLSAKKIGPVEIVEKIN 1387
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLY 2072
NAY L LP+ + NV+ L Y
Sbjct: 1388 PNAYRLKLPSHIRCADVFNVKHLLPY 1413
Score = 148 bits (374), Expect(2) = 0.0
Identities = 95/291 (32%), Positives = 137/291 (47%), Gaps = 6/291 (2%)
Frame = -3
Query: 5388 CFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAPEYNSEEE----PIDPIMA 5221
CF + GH +C VY E EEE + +
Sbjct: 310 CFNCGETGHRQAECKRAGKRHLFAESEDEQYEEYENNPVYDEETEYEEEVVTGDVGVNLV 369
Query: 5220 VVRCSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENH 5041
V R + +DW + ++F++ GKV VIDSGS N+IS+ A K AL E+H
Sbjct: 370 VRRSCYTPKADGDDWLKHNIFHSTCTILGKVFTFVIDSGSCDNLISEEAVQKLALKTESH 429
Query: 5040 PKPYNISWVDQT-HVPVAHRCCVPLQL-SSYSGHVWCDVANMDVADILLGRPWLYDLDVT 4867
PKPY + W+ + V V+ R V + + S+Y V CDV MD +LLGRPW Y+ ++
Sbjct: 430 PKPYKLQWLKKGGEVTVSKRALVSISIGSTYKDDVMCDVVPMDACHLLLGRPWEYERNIE 489
Query: 4866 HRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGI 4687
H GRSN Y F+ G KITL+PS P+++ A S +LL F E ++T
Sbjct: 490 HNGRSNTYSFLFGGVKITLVPSKPKQLAAKQSG----------TLLTISQFQDELEDTDS 539
Query: 4686 IYSLVCKQTDEASVSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
++ L+ K+ E E P ++ LLEE+ ++ R IQH ID
Sbjct: 540 VFVLIGKEVLEE--VEIPDAMVPLLEEFSDVFPVELPDGLPPLRDIQHHID 588
Score = 100 bits (250), Expect = 4e-17
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Frame = -1
Query: 6248 LRMTPPIFEGST-DTQGYLDWQILIEQYFECYAIPEKSKVKYAKFLLRGSTQLYWGSVER 6072
+R+ P F+GS+ + +G++DW +E+ FE +PE +V LRG +W ++
Sbjct: 94 IRVDIPEFDGSSLNPEGFIDWLATVEEVFEYKEVPENKRVALIATRLRGRASAWWQQLKL 153
Query: 6071 QMERRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQ 5892
R I +W MK L ++ ++++ +Y +L L QG +V +Y + L+ +
Sbjct: 154 TRNRLGKSRIVTWTKMKKCLRSNFLPHNFQRLMYQRLQNLKQGAKSVDDYTTEFYQLIAR 213
Query: 5891 CDLNEEPWVTVSRFKGGLRPEIKRAL-MYHPIDNIHDAYQLACEIEYEMKQSRYSQLVPK 5715
D+ E VSR+ GGLR +I A+ ++ P+ NI +A+Q A E + ++ S
Sbjct: 214 NDIQEPEEQLVSRYIGGLRVQIMEAVNLFDPL-NIPEAHQRALAFEKQNRRVGGSFTPAG 272
Query: 5714 NPINTKTLGPRGHSSNI----SNSSVPNTQKSISLPNKVTCFKCSQPGHLARDCKK 5559
+ + + PRG S SN+ + S S P CF C + GH +CK+
Sbjct: 273 GNVGSGSGAPRGGPSQQKPGGSNTGPTSKGASSSGPR---CFNCGETGHRQAECKR 325
>gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1459
Score = 956 bits (2472), Expect = 0.0
Identities = 462/821 (56%), Positives = 595/821 (72%), Gaps = 4/821 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+EL++ GF+R S SPCAVP LL PKKDGTWRMCID R +NKI +K FPIPR+DDL
Sbjct: 622 RQVEELISAGFVRPSASPCAVPALLVPKKDGTWRMCIDSRTVNKITIKYRFPIPRVDDLF 681
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D +SG+ F+K+DLRSGYHQ+R+R GDEWKTAFKT DGLYEW VMPFGL+NAPSTFMRLM
Sbjct: 682 DQLSGACIFSKIDLRSGYHQIRMRPGDEWKTAFKTRDGLYEWTVMPFGLSNAPSTFMRLM 741
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQV + Y+ KFLV+YFDDILI+S N +EH++HL+ +L ++ LF N KC F+ + ++
Sbjct: 742 NQVFRSYLNKFLVIYFDDILIYSQNMEEHLQHLKQVFLVLLEQHLFANTTKCEFLVDTIK 801
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGF+I+ +GL+ D K+KAI WPTPT+I +V FHGLA+FYRRFI FS + AP+T
Sbjct: 802 FLGFVISPTGLEMDFDKVKAIHGWPTPTSINDVRRFHGLASFYRRFIQNFSMVAAPLTEI 861
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L++ FEW +A+ +F +LKD + APVL LPNFSKVF V+CDA GIG LSQ+GHP+
Sbjct: 862 LKRPQFEWTKAAQESFDQLKDLMQRAPVLTLPNFSKVFEVECDASQNGIGAVLSQEGHPV 921
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKLN RQ+YS YDKEFYA++++L++W HYL+ +EFIL +DHQ+L +L Q+KLN
Sbjct: 922 AYFSEKLNESRQKYSIYDKEFYAIVRALQYWSHYLLGQEFILFTDHQSLKHLQYQSKLNT 981
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHAKW+E+L + + LK+KSGT N+VADALSRR GFE ++D Y PDF
Sbjct: 982 RHAKWVEYLSSFHYSLKYKSGTTNQVADALSRRHMLLNTLQVKTVGFEIIKDLYEKDPDF 1041
Query: 3226 NKIFNDISENSCLHHDYS---IKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRD 3056
KI+ CL Y ++ YLFK +KLCIP+ SLR +I+E H GG AGH GRD
Sbjct: 1042 AKIW-----QLCLLKPYKFFHLEQKYLFKGNKLCIPQGSLREAIIFENHNGGLAGHFGRD 1096
Query: 3055 KTLTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFV 2876
KTL L E FYWP+L KDV + + C C+++KT + NTGLY PLP+PE PW D+SMDFV
Sbjct: 1097 KTLALIHENFYWPSLEKDVTRHIKRCHICKMAKTTQHNTGLYLPLPVPESPWIDVSMDFV 1156
Query: 2875 IGLPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDR 2696
+GLP T +D+I VVVDRFSKMAHFIPC KT+DASH+ARL+F E+VRLHG+P TI SDR
Sbjct: 1157 LGLPITQRKNDAIMVVVDRFSKMAHFIPCHKTSDASHIARLYFHEVVRLHGIPKTITSDR 1216
Query: 2695 DTKFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLL 2516
D KF+SHFW TLW LGTKL FS+T HPQ+DGQTE VNR+LGN+LRC VG+ +WD++L
Sbjct: 1217 DVKFLSHFWRTLWSKLGTKLQFSSTAHPQTDGQTESVNRSLGNLLRCFVGKSIRSWDEIL 1276
Query: 2515 PTAEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNE 2336
EFA+N + N+TTG SPF+I G P P++L PL + S A T + I ++H +
Sbjct: 1277 GQVEFAYNKSRNQTTGRSPFEIVYGQNPTGPLELTPLLSSTAHSLDADTRVKEIQQLHKQ 1336
Query: 2335 VKNHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKK 2159
++ HI N KYQ AN +R +FKEGDLV R KER + KLQ K PFRI +
Sbjct: 1337 IQQHIQKQNTKYQQQANKSRRGETFKEGDLVWIRLSKERFPNRRYNKLQPKAKGPFRILR 1396
Query: 2158 KINDNAYTLDLPAKMDIHPTVNVEDLTLYKEPIHIEEPAKD 2036
+INDNA+ ++L + I P N+ DL+ + P+ + + A+D
Sbjct: 1397 RINDNAFQIELLDNLQISPVFNISDLS-HHYPMELTDQAED 1436
Score = 119 bits (299), Expect = 6e-23
Identities = 89/333 (26%), Positives = 147/333 (44%), Gaps = 33/333 (9%)
Frame = -1
Query: 6446 SRRNQEYGEGPSRTEHRQITRLNSETEYPTINPSFRVTSHSDTGLEETQDRGYQYR---T 6276
+R NQE R E I RL + +N + + E D +R +
Sbjct: 8 TRNNQEQTIEELRQE---IQRLQDKLAAVEVNQQGETSHEREEPHPEEADENPFHREGLS 64
Query: 6275 RDEDDALKSLRMTP-------------PIFEGSTDTQGYLDWQILIEQYFECYAIPEKSK 6135
++D L+ LR P P FEG D +++W IE+ + IP++
Sbjct: 65 GEDDIPLRYLRREPRRSTHDYGIRLDLPEFEGRLDPDEFINWLHTIERILDYKEIPQERI 124
Query: 6134 VKYAKFLLRGSTQLYWGSVERQMERRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSR 5955
VK L+G+ L+W +++R +R I +W M +L +K++ HYRQ ++ +L
Sbjct: 125 VKLVAIKLKGNASLWWENLKRSRQREGKSRITTWAKMIKELQKKFLPMHYRQDMFLRLHN 184
Query: 5954 LIQGNDTVPEYMNKLDNLLIQCDLNEEPWVTVSRFKGGLRPEIKRALMYHPIDNIHDAYQ 5775
L Q +V EY + + L ++C L E T++RF GGL I + P + D
Sbjct: 185 LQQHELSVEEYAAEFEQLGLKCQLEEPEENTIARFLGGLHSSISNIVHLQPYWTLSDVIN 244
Query: 5774 LACEIEYEMKQ-----SRYSQLVPKNPINTKTLGPRGHSSNISNSSVPNTQKSISLPNKV 5610
L+ ++E ++KQ S QL +P ++K R +N VPN +++ P +
Sbjct: 245 LSLKVEKQLKQGKRRISTGEQLTGTHPTSSKLQEKRN-----TNPYVPNVGPNVTHPRPI 299
Query: 5609 T------------CFKCSQPGHLARDCKKKTLL 5547
T CFKC GH+A +C + L+
Sbjct: 300 TNSQSTNPIPARRCFKCHGFGHIAANCPTRRLV 332
Score = 114 bits (285), Expect = 3e-21
Identities = 105/394 (26%), Positives = 161/394 (40%), Gaps = 34/394 (8%)
Frame = -3
Query: 5613 SNMFQMLPAWTLS*RL*EEDIID---------H*GNHRT*T*ARGT*RGCLCSRIQ**RR 5461
SN+ + P WTLS D+I+ G R T + T S++Q R
Sbjct: 228 SNIVHLQPYWTLS------DVINLSLKVEKQLKQGKRRISTGEQLTGTHPTSSKLQEKRN 281
Query: 5460 HSSNISNYSVPNTQKSISLPNKVT------------CFKFSQPGHLARDCXXXXXXXXXX 5317
+N VPN +++ P +T CFK GH+A +C
Sbjct: 282 -----TNPYVPNVGPNVTHPRPITNSQSTNPIPARRCFKCHGFGHIAANCPTRRLVTLME 336
Query: 5316 XXXXXXXXXXXXEDVYAPEYNS----EEEPIDP-----IMAVVRCSILKEIPAEDWKRTS 5164
D + E NS E E I P ++ + R + P W R +
Sbjct: 337 EVQM---------DEDSGEGNSTQLQETEQIIPADEGELLVIRRLLNTQYEPKRQWLRHN 387
Query: 5163 LFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENHPKPYNISWVDQ-THVPVAH 4987
+F T +GKVC ++IDSGS NV+S K L + HP+ Y + W+ + + V
Sbjct: 388 IFRTRCTVHGKVCNLIIDSGSCENVVSSLMIEKLQLATQPHPQLYKLVWLKKGNEIEVNR 447
Query: 4986 RCCVPLQL-SSYSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNGKKITL 4810
+C V + + V CDV MD +LLGRPW YD H G N Y F NG+ L
Sbjct: 448 QCLVQFSMGKDFQEQVLCDVVPMDACHLLLGRPWQYDRKTIHDGFHNTYSFQDNGRTRIL 507
Query: 4809 LPSLPREIRASHSKGKAIER--TKTISLLQAQPFMKESQETGIIYSLVCKQTDEASVSET 4636
P + + ++ + + TKT S +K Q G++ L+ + ++ +
Sbjct: 508 TPYNDNQEKKPATQPTELLQLTTKTESTNMFTQALKAEQH-GLVLLLLVENKEQ---KQH 563
Query: 4635 PPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
P E+ LL E+ ++ R +QHA+D
Sbjct: 564 PSEIQPLLREFHQVFPDKLPTGVPPMREVQHAVD 597
>gb|PKU69610.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1278
Score = 949 bits (2452), Expect = 0.0
Identities = 451/804 (56%), Positives = 586/804 (72%), Gaps = 1/804 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQ+++LL KGFIR S+SPCAVP LL PKKDGT+RMCID RA+NKI ++ FP+PR+DDL
Sbjct: 452 RQIEDLLAKGFIRPSVSPCAVPALLVPKKDGTYRMCIDSRAVNKITIRYRFPMPRIDDLF 511
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + G+ F+K+DLRSGYHQ+R+REGDEWKTAFK DGL+EW+VMPFGL+NAPSTFMRLM
Sbjct: 512 DQLQGAVLFSKIDLRSGYHQIRVREGDEWKTAFKVRDGLFEWMVMPFGLSNAPSTFMRLM 571
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+ + Y+GKF++VYFDDIL++S + H++HL+ +EIL+++ L+ + KKC F+ ++++
Sbjct: 572 NQIFQSYLGKFVIVYFDDILVYSPDFRSHLQHLRQVMEILRQQTLYCHPKKCQFLNHKIQ 631
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGF+++ +G++ DP K+ AIV WP P ++T+V FHGLA+FYRRFI FST+ AP+T
Sbjct: 632 FLGFVLSANGIEVDPEKVTAIVSWPVPHSLTDVRRFHGLASFYRRFIANFSTVAAPMTEL 691
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+ +F W +A+ +F +LK+++T+APVLRLP+F VF VDCDA VGIG LSQ+G P+
Sbjct: 692 LKSDSFCWTKTAQNSFEQLKEKMTTAPVLRLPDFHNVFQVDCDASNVGIGAVLSQEGQPV 751
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKLN RQ+YSTYDKEFYA++++L HW HYL+ +EF+L +DH AL +L+SQ KL
Sbjct: 752 AYFSEKLNEARQKYSTYDKEFYAIVRALHHWSHYLLCREFVLFTDHAALKFLDSQKKLRG 811
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHA W E L + FVLKHKSG N+VADALSRR GFE +++ YA DF
Sbjct: 812 RHATWSESLAAFQFVLKHKSGKLNQVADALSRRHVLLQVLQSKVIGFENIKEMYATDVDF 871
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
++ ++S H Y IKDG+LF + LCIPR S+R LI E H G AGH GRDKTL
Sbjct: 872 QGVWKLCQDSS--HLQYHIKDGFLFFRTCLCIPRGSIRLVLISECHDSGMAGHFGRDKTL 929
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
+L +E+FYWP + KDV + V C+ C+ +KT N GLY PLP+P GPW+D+SMDFV+GL
Sbjct: 930 SLIKEKFYWPAIHKDVNRYVRGCRICKRAKTPGTNAGLYLPLPVPSGPWEDVSMDFVLGL 989
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
P T + DSI VVVDRFSKMAHF+ C+KT DA+H+ L+F+EIVRLHG+P TI SDRD K
Sbjct: 990 PHTQRNKDSIMVVVDRFSKMAHFVACNKTLDATHIGDLYFREIVRLHGIPKTITSDRDVK 1049
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW TLW LGT+L FS+ HPQ+DGQTE +NR+LGN+LRC VG++ WD +L
Sbjct: 1050 FLSHFWKTLWGKLGTRLQFSSVAHPQTDGQTETINRSLGNLLRCFVGKNVRQWDLILAQV 1109
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFAFN +IN TTG SPF+I G+ P PIDL P+ S + I +H +V+
Sbjct: 1110 EFAFNRSINHTTGRSPFEIVYGHNPLSPIDLIPIANVSAYSTDGEQRSVEIKNLHKQVQE 1169
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKIN 2150
IA N KYQ AN H++ V FKEGDLV R RKER G KL+ K PFRI KKIN
Sbjct: 1170 EIARQNAKYQRQANKHRKFVQFKEGDLVWIRLRKERFPPGPFGKLKPKADGPFRILKKIN 1229
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLT 2078
DNAY +DLP ++ NV DLT
Sbjct: 1230 DNAYQIDLPGDYNVSAVFNVADLT 1253
Score = 128 bits (321), Expect = 2e-25
Identities = 87/292 (29%), Positives = 129/292 (44%), Gaps = 7/292 (2%)
Frame = -3
Query: 5388 CFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAPEYNSEEEPI----DPIMA 5221
CFK GH+A +C V P+ N + + D
Sbjct: 151 CFKCHGFGHIASNCPTRRVVTLIEEDETVLDTPVAH--VSNPDNNPQSDHTAIGADEGQL 208
Query: 5220 VVRCSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENH 5041
+V +L E +R +LF T G+VC++++DSGS N+ S K L E H
Sbjct: 209 LVLRRLLSAQKEEPVQRHNLFKTRCTIQGRVCQVIVDSGSCENIASCTLVEKLQLSTEAH 268
Query: 5040 PKPYNISWVDQTH-VPVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRPWLYDLDVTH 4864
PKPY +SW+ + V V+ RC VP + + VWCDV MD +LLGRPW +D H
Sbjct: 269 PKPYKLSWIQSENAVEVSRRCLVPFSIGKFKDQVWCDVLPMDACHLLLGRPWQFDRGTIH 328
Query: 4863 RGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGII 4684
G +N Y + NG+ I LLP + S+ + L+ + Q+
Sbjct: 329 DGVANTYTLVQNGETIVLLPLAVGQEGPSNDQ----------FLINKKACQLAIQDVQHC 378
Query: 4683 YSLVCKQTDEASVSETP--PEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
Y L+ K E +TP PE+ +LL+++Q++ R IQHA+D
Sbjct: 379 YLLLIK---EVINGDTPPQPEIQQLLQDFQDVWVEELPVGLPPLRDIQHAMD 427
Score = 79.3 bits (194), Expect = 1e-10
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Frame = -1
Query: 6026 MKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQCDLNEEPWVTVSRFK 5847
MK +L KY++ YRQ ++ +L RL Q TV EY+ + + LL++CDL E P T++RF
Sbjct: 1 MKKELQRKYLTDQYRQELFLRLQRLQQHQLTVEEYVAEFEQLLLKCDLAEPPENTIARFI 60
Query: 5846 GGLRPEIKRALMYHPIDNIHDAYQLACEIEYEMKQSRYSQL------------VPKNPIN 5703
GL+P I + + D L+ ++E + + S+ L ++ I
Sbjct: 61 EGLQPAIAHVVQLQSYWTLQDVINLSIKVEKQQRNSKPFHLRAREGGAEKAFQTSRSAIG 120
Query: 5702 TKTLGPRGHSSNISNSSVPNTQKSISLPNKVTCFKCSQPGHLARDCKKKTLL 5547
G++++ S P Q + K CFKC GH+A +C + ++
Sbjct: 121 GAATSSMGNTADKRTSQGPPPQTIGTAARK--CFKCHGFGHIASNCPTRRVV 170
>gb|OTG11106.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1230
Score = 944 bits (2440), Expect = 0.0
Identities = 451/806 (55%), Positives = 599/806 (74%), Gaps = 1/806 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+EL++KG +RES+SPCAVP LLTPKKDGTWRMC+D RAINKI V+ FPIPRLDDLL
Sbjct: 378 RQVEELISKGHVRESMSPCAVPALLTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLL 437
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D +SG++ FTKLDL+SGY+Q+R+R GDEWKTAFKT +GLYEWLVMPFGL+NAPSTFMR+M
Sbjct: 438 DQLSGASIFTKLDLKSGYYQIRLRPGDEWKTAFKTREGLYEWLVMPFGLSNAPSTFMRVM 497
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+L+P+IGKF+VVYFDDILI+S + +H+ H++ L +L++++ + KKCVFM +V
Sbjct: 498 NQLLRPFIGKFVVVYFDDILIYSASFSDHVVHVRQVLALLRRDRFYAATKKCVFMTPKVL 557
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLG++I+ G++ D +K+ A+ +WPTPTTITE+ SFHGLA+FYRRFI FS+I+AP+T+C
Sbjct: 558 FLGYVISGDGIQVDESKVAAVQNWPTPTTITELRSFHGLASFYRRFIPHFSSIMAPVTDC 617
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
++ K F W AE AF +K+++T+AP+L LPNFS+VF + DA VGIGG LSQ G P+
Sbjct: 618 MKGKMFVWTDEAELAFQVVKEKLTTAPILVLPNFSQVFELHTDASKVGIGGVLSQGGRPV 677
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKL + RYSTYD EFYAV+Q++KHWRHYL HKEF+L +DH +L ++ +Q K++
Sbjct: 678 AYFSEKLTGPKLRYSTYDLEFYAVVQAVKHWRHYLFHKEFVLFTDHDSLRHIRTQDKVSH 737
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
+H +W+ FL+++TFV+KHK+G N+VADALSRR G E +R++ AI P F
Sbjct: 738 KHGRWLAFLEKFTFVVKHKTGVSNRVADALSRRSNLLVSMRVDVPGLEVIREQLAIDPYF 797
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
+ I D+ D+ + DG+LFK ++LCIP +SLR +I E+HG GH GRD+TL
Sbjct: 798 SVILQDVESGQ--KSDFLLYDGFLFKGNQLCIPDSSLRLKIIKELHG---EGHVGRDRTL 852
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L + +YWPT+ K+V + V C+ CQ+SK N GLY PLPIP PW D+SMDFV+GL
Sbjct: 853 QLVQASYYWPTMRKEVDRYVKRCRVCQVSKGTATNAGLYMPLPIPSQPWVDISMDFVLGL 912
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT +DSI+VVVDRFSKM HFIPC KTTDA +VA+LFF+++ RLHGLP +IVSDRDT+
Sbjct: 913 PRTQRGNDSIFVVVDRFSKMVHFIPCKKTTDAVNVAQLFFRDVYRLHGLPSSIVSDRDTR 972
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW +LWK++ T+LNFS+ YHPQ++GQTEVVNR+LGN+LRCLVG+H WD+ L A
Sbjct: 973 FLSHFWRSLWKMVNTQLNFSSAYHPQTNGQTEVVNRSLGNLLRCLVGDHVKAWDQKLCQA 1032
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFA N A NR+TG+SPFQI QPR P+DL LP + F + + ++HN V +
Sbjct: 1033 EFAHNHADNRSTGYSPFQIVYSSQPRGPLDLMSLPVSGSVPKKVQDFVEGLCEVHNAVYD 1092
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
H+ +NLKY+ AA+ +R V F+EGD V K+R G + KL AK + P I +K N
Sbjct: 1093 HLTRANLKYKQAADQKRRHVEFEEGDFVWAVLTKDRFTVGEYNKLSAKKIGPVEIVEKTN 1152
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLY 2072
NAY L LP+ + NV+ L Y
Sbjct: 1153 PNAYRLKLPSHIRCADVFNVKHLLPY 1178
Score = 147 bits (372), Expect = 1e-31
Identities = 95/291 (32%), Positives = 137/291 (47%), Gaps = 6/291 (2%)
Frame = -3
Query: 5388 CFKFSQPGHLARDCXXXXXXXXXXXXXXXXXXXXXXEDVYAPEYNSEEE----PIDPIMA 5221
CF + GH +C VY E EEE + +
Sbjct: 75 CFNCGETGHRQAECKRAGKRHLFAESEDEQYEEYENNPVYDEETEYEEEVVTGDVGVNLV 134
Query: 5220 VVRCSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENH 5041
V R + +DW + ++F++ GKV VIDSGS N+IS+ A K AL E+H
Sbjct: 135 VRRSCYTPKADGDDWLKHNIFHSTCTILGKVFTFVIDSGSCDNLISEEAVQKLALKTESH 194
Query: 5040 PKPYNISWVDQT-HVPVAHRCCVPLQL-SSYSGHVWCDVANMDVADILLGRPWLYDLDVT 4867
PKPY + W+ + V V+ R V + + S+Y V CDV MD +LLGRPW Y+ ++
Sbjct: 195 PKPYKLQWLKKGGEVTVSKRALVSISIGSTYKDDVVCDVVPMDACHLLLGRPWEYERNIE 254
Query: 4866 HRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGI 4687
H GRSN Y F+ G KITL+PS P+++ A S +LL F E ++T
Sbjct: 255 HNGRSNTYSFLFGGVKITLVPSKPKQLAAKQSG----------TLLTISQFQDELEDTDS 304
Query: 4686 IYSLVCKQTDEASVSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
++ L+ K+ E E P ++ LLEE+ ++ R IQH ID
Sbjct: 305 VFVLIGKEVLEE--VEIPDAMVPLLEEFSDVFPVELPDGLPPLRDIQHHID 353
>gb|PKU68694.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1207
Score = 941 bits (2432), Expect = 0.0
Identities = 456/809 (56%), Positives = 583/809 (72%), Gaps = 1/809 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV+EL+ KGF+R S SPCAVP LL PKKDGT+RMCID R+INKI +K FPIPR+DD+
Sbjct: 393 RQVEELILKGFVRASASPCAVPALLVPKKDGTFRMCIDSRSINKITIKYRFPIPRIDDIF 452
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + G+ F+KLDLRSGYHQ+R++ GDEWKTAFKT +GLYEW VMPFG++NAPSTFMRLM
Sbjct: 453 DQLYGATLFSKLDLRSGYHQIRMKPGDEWKTAFKTKEGLYEWTVMPFGVSNAPSTFMRLM 512
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+ +P I K +VVYFDDILI+S + H+ HL+ EIL+ ++LF++ KKC ++ N +
Sbjct: 513 NQIFQPLINKCVVVYFDDILIYSTTLESHLLHLRDVFEILRTQRLFVHPKKCQYLTNSIS 572
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGFII+ G+ ADPAK++AI+ WP P TITEV FHGLA+FYRRFI FSTI APIT
Sbjct: 573 FLGFIISAEGVNADPAKVEAIIQWPIPQTITEVRQFHGLASFYRRFIQNFSTIAAPITEL 632
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+ F W A+ F +LK I++APVL LPNF++VF VDCDA VGIG LSQ+GHPI
Sbjct: 633 LKGDRFVWTAEADNRFKQLKQVISTAPVLALPNFNEVFEVDCDASNVGIGAVLSQRGHPI 692
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
FFSEKLN VRQ+YS YDKEFYAV+Q+L+HW HYL+ EFIL +DH+AL +LN+Q KL
Sbjct: 693 AFFSEKLNDVRQKYSVYDKEFYAVVQALRHWEHYLLPHEFILFTDHEALRFLNTQQKLKG 752
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHA W+E+L + FVLKHKSG N+VADALSRR TGFE L++ Y PDF
Sbjct: 753 RHAAWVEYLGAFHFVLKHKSGKLNQVADALSRRVILLQTLQTKVTGFEILKELYPQDPDF 812
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
++++ E + Y + +LF ++LC+P+ S R +I E H AGH GRDKTL
Sbjct: 813 GELWSKCLETP--YKFYHRQQEHLFYGNRLCVPQGSTRLVIIRECHESSIAGHFGRDKTL 870
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L +E F+WP+L++DV + + C+ C I+KTQ + GLY PLP+P+GPW D+S+DFV+GL
Sbjct: 871 ALVQEHFFWPSLNRDVDRFIKRCRICVIAKTQSKKLGLYIPLPVPDGPWTDVSLDFVLGL 930
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT + DSI VVVDRFSKM+HFI C+KT DASH+A L+FKEIVRLHG+P TI SDRD K
Sbjct: 931 PRTQRNKDSIMVVVDRFSKMSHFIACNKTLDASHIADLYFKEIVRLHGIPRTITSDRDVK 990
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW TLW LGTKL FS+T HPQ+DGQTE VNR+LGN+LRC VG++ +WD +LP
Sbjct: 991 FLSHFWRTLWAKLGTKLQFSSTAHPQTDGQTETVNRSLGNLLRCFVGKNLKSWDLILPQV 1050
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFAFN ++++ TG SPFQ+ G P P+DL P + S+ +Q + +H +VK
Sbjct: 1051 EFAFNRSVSQATGHSPFQVAYGCVPLSPLDLIPQVQTDRYSEDGAIRSQEVQNLHRKVKE 1110
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKIN 2150
I N K Q AN +R V F+EGD V R RKER G KL+ K PFR+ +K+
Sbjct: 1111 LITKHNDKCQKQANRKRRDVKFQEGDRVWIRLRKERFPPGAFGKLKPKADGPFRVVRKLG 1170
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLYKEP 2063
DNAY ++LP++ ++ T NV L Y EP
Sbjct: 1171 DNAYQIELPSEYNVSATFNVAYLVPYYEP 1199
Score = 117 bits (293), Expect = 3e-22
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 1/218 (0%)
Frame = -3
Query: 5184 EDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENHPKPYNISWVDQ- 5008
E W R ++F T +VC ++IDSGS NV++ K L HP+PY +SW+ +
Sbjct: 162 ESWLRHNIFRTRCTVKDRVCNVIIDSGSCENVVATMMVNKLQLSTTEHPRPYALSWIQKD 221
Query: 5007 THVPVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHN 4828
V V RC V + + V CDV MD +LLGRPW +D + H G +N Y F HN
Sbjct: 222 AEVQVDKRCQVDFSIGPFQDRVQCDVVPMDACHLLLGRPWQFDKNTIHNGTTNTYSFYHN 281
Query: 4827 GKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGIIYSLVCKQTDEAS 4648
++I LLP+ E + +TI+ L + + + + LV
Sbjct: 282 NQQIVLLPTPVVE-----------DNEQTINALFDRTLLFQDLKVSQRGLLVMLMEGNLV 330
Query: 4647 VSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
E P V +L+E+ +I R IQH +D
Sbjct: 331 SDEVPEVVQPILQEFADILVQELPSGLPPLRDIQHHMD 368
>gb|PKU81761.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1268
Score = 943 bits (2437), Expect = 0.0
Identities = 444/804 (55%), Positives = 585/804 (72%), Gaps = 1/804 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQ++ELLN+G+IR S+SPCAVP LL PKKDG++RMCID RAINKI V+ FPIPR+DDL
Sbjct: 453 RQIEELLNRGYIRPSVSPCAVPALLVPKKDGSYRMCIDSRAINKITVRYRFPIPRIDDLF 512
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + G+ F+K+DLRSGYHQ+R+REGDEWKTAFK DGLYEWLVM FGL+NAPSTFMRLM
Sbjct: 513 DQLQGATIFSKIDLRSGYHQIRVREGDEWKTAFKVRDGLYEWLVMSFGLSNAPSTFMRLM 572
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+ +P++ KF++VYFDDIL++S + H++HL+ +ILK++KL+ + KKC F+ +
Sbjct: 573 NQIFQPFLSKFVIVYFDDILVYSPDVQSHLQHLRHVFQILKEQKLYCHKKKCQFLDQRIR 632
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGFI++ G++ D K++AI+ WP P + T+V FHGLA+FYRRFI FSTI A +T
Sbjct: 633 FLGFIVSAEGVEVDSDKVEAILSWPNPCSFTDVRRFHGLASFYRRFIANFSTIAALLTEL 692
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L++ + W +A+ +F ELK +TSAPVLRLP+FSK+F VDCDA VG+G LSQ+G P+
Sbjct: 693 LKEDSSHWTAAAQLSFDELKKNMTSAPVLRLPDFSKIFQVDCDASNVGVGAVLSQEGRPV 752
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKLN RQRYSTYDKEFYA++++L HW HYL+ KEF+L +DH AL ++ SQ KL
Sbjct: 753 AYFSEKLNETRQRYSTYDKEFYAIVRALHHWSHYLLPKEFVLFTDHAALKFIESQKKLKG 812
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHA W EFL + FVL+HKSGT N+VADALSRR TGFE +RD YA DF
Sbjct: 813 RHASWSEFLAAFQFVLQHKSGTLNQVADALSRRYILLQALHTRLTGFETIRDLYATDTDF 872
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
+++ ++ H + K+GYLF +++CIP S+R L+ E H GG +GH GRDKTL
Sbjct: 873 KEVWVLCQDSP--HKLFHRKEGYLFLGTRICIPNCSVRLALVAECHDGGMSGHFGRDKTL 930
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
TL +ERF+WP++ +DV + V C+ C+ +KT N GLY+PLP+P GPW+D+SMDF++GL
Sbjct: 931 TLLKERFHWPSMQRDVLRYVQSCQVCKRAKTSLTNAGLYSPLPVPVGPWEDVSMDFILGL 990
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT + DS+ V+VDRFSKMAHF+ C+KT DA+H+A L+FKE+VRLHG+P TI SDRD K
Sbjct: 991 PRTQRNKDSVMVIVDRFSKMAHFVACNKTMDATHIADLYFKEVVRLHGIPKTITSDRDVK 1050
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW TLW L T+L +S+T HPQ+DGQTE +NR+LGN+LRC +G+H WD +L
Sbjct: 1051 FLSHFWRTLWSKLCTRLQYSSTAHPQTDGQTETINRSLGNLLRCFIGKHIKQWDLILAQV 1110
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFAFN + N+TTG PF+I G P P+DL P T S+ ++ I K+H +V+
Sbjct: 1111 EFAFNRSTNQTTGHIPFEIVYGTNPLTPLDLMPSATLTAVSKEGEQRSKEIKKLHQQVRE 1170
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
HI N KYQ AN H++ F+ GD V + RKER G+ KL+ K PFRI K+IN
Sbjct: 1171 HIVKQNTKYQKQANKHRKLQQFQVGDKVWIKLRKERFPPGSFGKLKPKADGPFRITKRIN 1230
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLT 2078
DNAY +DLP ++ NV DLT
Sbjct: 1231 DNAYEIDLPGDYNVSAVFNVADLT 1254
Score = 118 bits (296), Expect = 1e-22
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Frame = -3
Query: 5175 KRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENHPKPYNISWVDQ-THV 4999
+R SLF T +VC+I++DSGS N+ S+ K + ENHP+PY +SW+ + V
Sbjct: 225 QRHSLFRTRGTIQDRVCQIIVDSGSCENIASRTLVDKLQIPTENHPQPYKLSWIQRGNEV 284
Query: 4998 PVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNGKK 4819
V RC V + + VWCDV MD +LLGRPW +D H G +N Y + +
Sbjct: 285 EVTKRCLVHFSIGKFKDQVWCDVLPMDACHLLLGRPWQFDKKTVHDGLANTYTLVQGQET 344
Query: 4818 ITLLPSLPREIRASHSKGKAIERTKTISLLQAQPFMKESQETGIIYSLVCKQTDEASVSE 4639
L+P E T L+ ++ Q+ Y ++ K+ E +
Sbjct: 345 FVLIP----------CPSTCDEGTAGQLLVSKTECLRAIQQADGGYLILVKEA-EKKTAA 393
Query: 4638 TPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
P E+ LL EY E+ R IQHAI+
Sbjct: 394 VPEEIQPLLHEYSEVWTEELPAGLPPLREIQHAIE 428
Score = 89.4 bits (220), Expect = 1e-13
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Frame = -1
Query: 6026 MKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQCDLNEEPWVTVSRFK 5847
MK +L KY+S +YRQ ++ +L RL Q +V EY+ + + L ++CDL+E T++RF
Sbjct: 1 MKKELQRKYLSDYYRQDLFLKLHRLQQHQFSVEEYVAEFEQLALKCDLSEPVENTIARFL 60
Query: 5846 GGLRPEIKRALMYHPIDNIHDAYQLACEIEYEMKQSRYSQLVPKNPINTK-TLGPRGHSS 5670
GL+P I + P + D LA ++E + K S+ +Q K K + G RG +S
Sbjct: 61 EGLQPAIANVVQLQPYWTLQDVITLALKVERQQKTSKGTQFKFKELAGDKASHGIRGVAS 120
Query: 5669 NISNSSVPNTQKSISLPNKVT-----------CFKCSQPGHLARDCKKKTLL 5547
VP+ ++S P + CFKC GH+A C + ++
Sbjct: 121 TSQEKLVPSQERSPGRPGSFSSGGTSSAPARKCFKCQGFGHIASSCPTRRVI 172
>gb|PKU61482.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1164
Score = 939 bits (2426), Expect = 0.0
Identities = 456/827 (55%), Positives = 593/827 (71%), Gaps = 2/827 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
RQV++LLN+G+IR S SPCAVP LL PKKDG++RMC+D RAINKI V+ FPI R+DDL
Sbjct: 340 RQVEDLLNRGYIRPSTSPCAVPALLVPKKDGSYRMCVDSRAINKITVRYRFPILRIDDLF 399
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + G+A F+KLDLRSGYHQ+R+REGDEWKTAFK DGLYEWLVMPFGL+NAPSTFMRLM
Sbjct: 400 DQLQGAAVFSKLDLRSGYHQIRVREGDEWKTAFKVRDGLYEWLVMPFGLSNAPSTFMRLM 459
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+ +P + ++VYFDDILI+S + HM+HL+ L+ILK+++L+ + +KC F+ + ++
Sbjct: 460 NQIFQPLLSHCVIVYFDDILIYSKDLQSHMQHLKQVLQILKEQRLYCHPRKCHFLDSWIQ 519
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGFI++ G++ DP KI+AIV WP P + T+V FHGLA+FYRRFI FSTI AP+T
Sbjct: 520 FLGFILSAEGIEVDPEKIRAIVTWPIPCSFTDVRRFHGLASFYRRFIARFSTIAAPLTEL 579
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+ TF WN A+ +F ELK ++TS PVLRLP+F K+F V+CDA +GIG LSQ+G PI
Sbjct: 580 LKASTFCWNQEAQGSFDELKRQMTSTPVLRLPDFDKLFQVECDASNIGIGAVLSQEGKPI 639
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKLN VRQRYSTYDKEFYA++++L HW HYL+ KEFIL +DH AL +L+S+ KL
Sbjct: 640 AYFSEKLNEVRQRYSTYDKEFYAIVRTLHHWSHYLLCKEFILFTDHAALKFLDSKKKLRG 699
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHA W EFL + FVLKHKSG N+VADALSRR GF+ +++ YA PDF
Sbjct: 700 RHATWAEFLSAFQFVLKHKSGKDNQVADALSRRYALLQTVQAQLVGFDAIKEMYAADPDF 759
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
+I+ + + + +K+ +LFKS +CIP SLR +I E H GG +GH GRDKTL
Sbjct: 760 GEIWRKCQQ--APYQLFYLKEDFLFKSLSICIPDCSLRLAVIAECHDGGLSGHFGRDKTL 817
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L E+F+WP + +DV + + C+ C+ +KT N GLY+PLPIP PW D+SMDFV+GL
Sbjct: 818 FLTREKFFWPNIKRDVTRYIRSCQVCRRAKTTLTNAGLYSPLPIPLRPWDDVSMDFVVGL 877
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT + DSI VVVDRFSKM+HFI C KT DA+H++ L+FKEIVRLHG+P TIVSDRD K
Sbjct: 878 PRTQRNKDSIMVVVDRFSKMSHFIACHKTLDATHISDLYFKEIVRLHGIPRTIVSDRDVK 937
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW TLW LGT+L FS+ HPQ+DGQTE VNR+LGN+LRC VG++ WD +LP
Sbjct: 938 FLSHFWRTLWGKLGTRLQFSSAAHPQTDGQTETVNRSLGNLLRCFVGKNLKQWDLVLPQI 997
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFAFN +IN+TTG +PF++ G P P+DL P + SQ ++ I K+H +V++
Sbjct: 998 EFAFNRSINQTTGHTPFELVYGNNPLTPLDLLPALSVSVYSQDGERRSEEIKKLHQQVRD 1057
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKIN 2150
IA N +YQ AN H+R V F+ GD+V + RKER G KL+ K PFR K+IN
Sbjct: 1058 KIAQQNTRYQKQANKHRRSVVFQVGDMVWIKLRKERFPPGPFGKLKPKADGPFRGLKRIN 1117
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLYKEPIHIEEP-AKDANEVKAII 2012
DNAY ++LP ++ NV DLT + + I P DA ++
Sbjct: 1118 DNAYEIELPGDYNVSAVFNVSDLTPHVDLEDISPPRVNDAGATNVVV 1164
Score = 122 bits (305), Expect = 1e-23
Identities = 78/226 (34%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Frame = -3
Query: 5199 KEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENHPKPYNIS 5020
KE P E W +LF T N +VC++++DSGS N+ S A K L HP+PY ++
Sbjct: 107 KEEP-EQWH--NLFRTRCTINDRVCQVIVDSGSCENIASCALVEKLELPTVKHPQPYALT 163
Query: 5019 WVDQTH-VPVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIY 4843
W+ + + + V RC V + + VWCDV MD +LLGRPW +D + H G +N Y
Sbjct: 164 WIQKDNKIEVTKRCLVHFSIGKFRDQVWCDVLPMDACHLLLGRPWQFDRNTIHNGATNTY 223
Query: 4842 EFMHNGKKITLLP-SLPREIRASHSKGKAIERTKTISLLQAQPFMKES--QETGIIYSLV 4672
+ I L+P P IE + L+ +Q K + Q G LV
Sbjct: 224 TLTQGRETIALMPVKFP------------IEEAGNVQLMVSQAECKTAIQQAEGGYLVLV 271
Query: 4671 CKQTDEASVSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAID 4534
K T++ PPE+ LL+EYQE+ R IQHAID
Sbjct: 272 KKATND--TFSCPPELQPLLKEYQEVWKEELPAGLPPLREIQHAID 315
>gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 944
Score = 926 bits (2393), Expect = 0.0
Identities = 448/810 (55%), Positives = 587/810 (72%), Gaps = 4/810 (0%)
Frame = -2
Query: 4483 QVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLLD 4304
Q+++LL+KGFI+ S+S CAVP LL PKKDG++RMC+D RA+NKI V+ FPIPR+DDL D
Sbjct: 131 QIEDLLSKGFIKPSVSSCAVPVLLVPKKDGSYRMCMDSRAMNKITVRYRFPIPRIDDLFD 190
Query: 4303 MISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLMN 4124
+ G+ F+K+DLRSGYHQ+R+REGDEWKTAFK DGLYEW VMPFGL+NAPSTF RLMN
Sbjct: 191 QLHGAKVFSKIDLRSGYHQIRLREGDEWKTAFKVRDGLYEWTVMPFGLSNAPSTFTRLMN 250
Query: 4123 QVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVEF 3944
QV +P++ KF+VVYFDDILIFS N +EH++H++ L L+++KL+ +I K F+ +++EF
Sbjct: 251 QVFQPFLCKFVVVYFDDILIFSENIEEHLQHIRLVLCKLREQKLYGHIGKSKFLDSKIEF 310
Query: 3943 LGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNCL 3764
L F+++ SG++ADP KI+AIV WPTP + TEV FHGLA+FYRRFI FS+I APIT L
Sbjct: 311 LCFVVSVSGIEADPRKIEAIVSWPTPQSFTEVRRFHGLASFYRRFIKNFSSIAAPITESL 370
Query: 3763 QKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPIT 3584
+ ++F W+ SA+ +F LK +T++PVL LP+F+KVF V+CDA VGIG LSQ GHPI
Sbjct: 371 KSESFVWSSSAQSSFELLKKAVTTSPVLNLPDFNKVFEVECDASNVGIGAVLSQDGHPIA 430
Query: 3583 FFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNPR 3404
FFSEKLN RQ+YSTYDKEFYA++++L HW HYL+ K+F+L +DH+AL YLNSQ KL R
Sbjct: 431 FFSEKLNEARQKYSTYDKEFYALVRALHHWNHYLLAKDFVLYTDHEALRYLNSQKKLKGR 490
Query: 3403 HAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDFN 3224
HA W EFL + +V+KHK+G N+ ADALSR G E +D Y++ DF
Sbjct: 491 HAAWSEFLASFNYVIKHKAGHLNQAADALSRCHLLLQTLQTKVLGMENFKDLYSVDADFK 550
Query: 3223 KIFNDISENSCLHHDYS---IKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDK 3053
I+ N CLH Y IKDGYLF LCIPR S R +I E H GG GH GRDK
Sbjct: 551 LIW-----NQCLHQPYKLFHIKDGYLFHGHSLCIPRGSNRLAIITEFHEGGLMGHFGRDK 605
Query: 3052 TLTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVI 2873
TL L +E+FYWP LS+DV + V C+ C+++KTQ N GLY+PLP+P+ PW+D+S+DFV+
Sbjct: 606 TLNLIQEKFYWPLLSRDVGRYVQGCRVCRMAKTQGTNAGLYSPLPVPKAPWEDVSLDFVL 665
Query: 2872 GLPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRD 2693
GLPRT + DSI VVV+RFSKMAHF+ C KT DASH+A L+ KEIVR++G+P+TI SDRD
Sbjct: 666 GLPRTQRNKDSIMVVVNRFSKMAHFVACHKTLDASHIANLYLKEIVRIYGIPMTITSDRD 725
Query: 2692 TKFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLP 2513
KF+S+FW TLW LGT+L +S+ HPQ+DGQTEVVNR+LGN+LRC V + WD +L
Sbjct: 726 IKFMSYFWKTLWSKLGTRLQYSSAAHPQTDGQTEVVNRSLGNLLRCFVRRNIKQWDLILA 785
Query: 2512 TAEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEV 2333
EFAFN ++N++T SPF+I G P P+DL P+ + ++ I K+H +V
Sbjct: 786 QIEFAFNRSVNQSTRRSPFEIVYGRNPLTPLDLIPIVQQTAYNLDGEQRSKEIQKLHQQV 845
Query: 2332 KNHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKK 2156
++ I N KY+ AN H+++V ++EGDLV R RKER KL+ + PFR+ K+
Sbjct: 846 QDEIIKQNEKYRAQANRHRKKVIYQEGDLVWIRLRKERFPAKAFSKLKPRADGPFRVVKR 905
Query: 2155 INDNAYTLDLPAKMDIHPTVNVEDLTLYKE 2066
INDNAY +DLP +I NV DLT + E
Sbjct: 906 INDNAYLIDLPGDYNILAVFNVADLTPHYE 935
Score = 70.5 bits (171), Expect = 5e-08
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -3
Query: 5067 KFALILENHPKPYNISWVDQTHV-PVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRP 4891
K L E HP PY ++W+ + +V V RC V + +Y +WCDV MD +LLGRP
Sbjct: 4 KLQLKTEKHPNPYKLAWIQKENVVKVTKRCLVNFSIGTYKEQLWCDVVPMDACHLLLGRP 63
Query: 4890 WLYDLDVTHRG 4858
W YD H G
Sbjct: 64 WQYDRQTIHDG 74
>gb|PKU68398.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1277
Score = 935 bits (2416), Expect = 0.0
Identities = 450/808 (55%), Positives = 584/808 (72%), Gaps = 1/808 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
+QV+ LL +GFIR S+SPCAVP+LL PKKDGT+RMCID RA+NKI ++ FPIPR+DDL
Sbjct: 463 QQVEGLLAQGFIRPSVSPCAVPSLLVPKKDGTYRMCIDSRAVNKITIRYRFPIPRIDDLF 522
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + G+ F+K+DLRSGYHQ+RIREGDEWKTAFK DGL+EWLVMPFGL+NAPSTFMRLM
Sbjct: 523 DQLQGATIFSKIDLRSGYHQIRIREGDEWKTAFKVRDGLFEWLVMPFGLSNAPSTFMRLM 582
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
NQ+ +P++ KF+++YFDDIL++S++ H++HL+ ++LK+++L+ + +KC F+ ++
Sbjct: 583 NQIFQPFLCKFVIIYFDDILVYSSDCHSHLQHLRQVFQVLKEQRLYCHPQKCHFLGKRIK 642
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGFI++ +G++ DP KI+AIV WPTP + T+V FHGLA+FYRRFI FST+ AP+T
Sbjct: 643 FLGFILSVAGIEVDPEKIEAIVSWPTPQSFTDVRRFHGLASFYRRFIQNFSTLAAPLTEL 702
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+ F W AE +F LK+++T+ PVLRLP+F+K+F VDCDA VGIG LSQ+ P+
Sbjct: 703 LKTDKFLWTKEAEFSFEHLKEKVTTTPVLRLPDFNKLFQVDCDASNVGIGAVLSQEDQPV 762
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
+FSEKLN RQ+YSTYDKEFYA++++L HW HYL+ KEFIL +DH AL +LNSQ KL
Sbjct: 763 AYFSEKLNDSRQKYSTYDKEFYAIVRALHHWSHYLLSKEFILFTDHAALKFLNSQKKLRG 822
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
RHA W E L + FVLKHKSG QN+VADALSRR TGF+ +R+ YA DF
Sbjct: 823 RHAMWAESLAAFHFVLKHKSGKQNQVADALSRRHVLVQEIQAKLTGFDYIREMYAEDVDF 882
Query: 3226 NKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTL 3047
I+ + + Y I+DG+LF + +C+PR S+R LI E H GG AGH GRDKTL
Sbjct: 883 RDIWEKCQSQA--YQFYQIRDGFLFFHNCICVPRGSIRIALISECHDGGLAGHFGRDKTL 940
Query: 3046 TLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGL 2867
L +E+FYWP + KDV + V C+ C+ +KT N GLY PLP+P+ PW+D+SMDFV+GL
Sbjct: 941 ALVKEKFYWPAMPKDVGRYVKGCRICRQAKTTGTNAGLYLPLPVPQNPWEDVSMDFVLGL 1000
Query: 2866 PRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTK 2687
PRT + DSI VVVDRFSKMAHF+ C+KT DA+H+ L+F+EIVRLHG+P TI SDRD K
Sbjct: 1001 PRTQRNKDSIMVVVDRFSKMAHFVACNKTLDATHIGDLYFQEIVRLHGIPKTITSDRDVK 1060
Query: 2686 FVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTA 2507
F+SHFW TLW LGT+L FS+ HPQ+DGQTE VNR+LGN+LRC VG++ WD +L
Sbjct: 1061 FLSHFWKTLWGKLGTRLQFSSVAHPQTDGQTENVNRSLGNLLRCFVGKNLRQWDLILGQV 1120
Query: 2506 EFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVKN 2327
EFAFN + N TT SPF+I G P P+DL P+ S + I ++H +V+
Sbjct: 1121 EFAFNRSPNNTTRRSPFEIVYGSNPLTPLDLIPILNSSSYSLDGEQRSIEIKELHKQVQA 1180
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
I N KYQT AN H++ V F EGDLV R RKER G+ KL+ K PFR+ KKIN
Sbjct: 1181 EIIKQNSKYQTRANKHRKSVQFNEGDLVWIRLRKERFPPGSFGKLKPKAEGPFRVIKKIN 1240
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLYKE 2066
DNAY +DLP ++ NV DLT + E
Sbjct: 1241 DNAYQIDLPGDYNVSAVFNVADLTPHFE 1268
Score = 119 bits (297), Expect = 1e-22
Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Frame = -3
Query: 5253 SEEEPIDPIMAVVRCSILKEIPAEDWKRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAA 5074
++E P+ + V+ SI K PA+ R +LF T +VC+++IDSGS N+ S
Sbjct: 214 ADEGPLLVLRKVL--SIQKGEPAQ---RHNLFRTRCTIQDRVCQVIIDSGSCENIASATL 268
Query: 5073 STKFALILENHPKPYNISWVDQTH-VPVAHRCCVPLQLSSYSGHVWCDVANMDVADILLG 4897
K L HPKPY +SWV + + + V+ RC V + + WCDV MD +LLG
Sbjct: 269 VEKLQLPTILHPKPYKLSWVRRDNELEVSRRCLVNFSIGKFQDQAWCDVIPMDACHLLLG 328
Query: 4896 RPWLYDLDVTHRGRSNIYEFMHNGKKITLLPSLPREIRASHSKGKAIERTKTISLLQAQP 4717
RPW YD H G SN Y M G+ I LLP + + T + + +A+
Sbjct: 329 RPWQYDRKTVHDGASNTYSLMQAGEPIILLPLATSQDDMA---------TDQLVISRAEC 379
Query: 4716 FMKESQETGIIYSLVCKQTDEASVSETPPEVLRLLEEYQEITXXXXXXXXXXERSIQHAI 4537
+ QET Y ++ K+ + + P EV L+ E+QEI R IQH +
Sbjct: 380 HL-AIQETSHCYLVLLKEVGD-DICFHPLEVQPLIAEFQEIFVNELPAGLPPSRDIQHVV 437
Query: 4536 D 4534
D
Sbjct: 438 D 438
Score = 87.0 bits (214), Expect = 6e-13
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Frame = -1
Query: 6062 RRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGNDTVPEYMNKLDNLLIQCDL 5883
R I SW+ MK +L KY+ +YRQ ++ +L RL Q TV EY+ + + L ++CDL
Sbjct: 2 REGRSKITSWDKMKKELQRKYLPDYYRQDLFLKLHRLQQQQRTVEEYVAEFEQLSLKCDL 61
Query: 5882 NEEPWVTVSRFKGGLRPEIKRALMYHPIDNIHDAYQLACEIEYEMKQSR--YSQLVPKNP 5709
NE T++RF GL+P I + P + D LA ++E + K + Y +L
Sbjct: 62 NEPHENTIARFIEGLQPSIANIVQLQPYWTLQDVVNLALKVEKQQKGPKPFYHKLRDSGA 121
Query: 5708 INTKTLGPRGHSSNISNSSVPNTQKSISLPNKVT-------CFKCSQPGHLARDC 5565
+ P + +++SV N ++S P V CFKC GH+A +C
Sbjct: 122 EGSSK--PTRRTEGGASTSVEN-HPTMSRPTPVNQGVSARKCFKCHGFGHIASNC 173
>gb|PKU83407.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 836
Score = 916 bits (2368), Expect = 0.0
Identities = 459/838 (54%), Positives = 591/838 (70%), Gaps = 3/838 (0%)
Frame = -2
Query: 4480 VDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLLDM 4301
V++LL+K I+ SLSPCAVP L+ PKKDG WRMCID RAINKI VK FP+PR+ DLLD
Sbjct: 13 VEDLLDKQLIQHSLSPCAVPALIVPKKDGQWRMCIDSRAINKITVKYRFPVPRVSDLLDR 72
Query: 4300 ISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLMNQ 4121
++G+ F+KLDLRSGYHQ+R+R GDEWKTAFKT DGLYEW VMPFGL NAPSTFMRLM +
Sbjct: 73 LTGATIFSKLDLRSGYHQIRVRPGDEWKTAFKTRDGLYEWKVMPFGLCNAPSTFMRLMQE 132
Query: 4120 VLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVEFL 3941
VL+P++GK V YFDDIL+FS N +H++HL +L++ KL+LN+ KC F + V FL
Sbjct: 133 VLQPFLGKICVAYFDDILVFSTNLPDHVQHLTDIFRVLRQHKLYLNLHKCEFASPSVHFL 192
Query: 3940 GFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNCLQ 3761
GFI+T G++ D K++ I DWPTP ++ EV SFHGLA FYRRFI GFS +VAP+T+C++
Sbjct: 193 GFILTAGGVEVDQRKVQTIRDWPTPQSLFEVRSFHGLANFYRRFIRGFSMLVAPLTDCMK 252
Query: 3760 KKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPITF 3581
+F+W S +++F +K+ + +APVL LPNF K F VD DA VGIG LSQ+ PI F
Sbjct: 253 TGSFKWTTSQQQSFESIKEALCTAPVLALPNFEKPFHVDTDASTVGIGAVLSQESRPIEF 312
Query: 3580 FSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNPRH 3401
FSEKL+ RQ++STY++E YAV+++LK W HYL+H++F+L SD+QAL Y+N+Q ++ H
Sbjct: 313 FSEKLSPARQKWSTYEQELYAVVRALKQWEHYLLHQDFVLCSDNQALQYINNQKNISRMH 372
Query: 3400 AKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDFNK 3221
A+WI FLQ++TFVL+HK+G N+VADALSRR TG + ++ YA DF+
Sbjct: 373 ARWIVFLQKFTFVLQHKAGKLNRVADALSRRAAMLVRLQTEITGLQEMKSLYAEDTDFS- 431
Query: 3220 IFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKTLTL 3041
I + ++ DY+++ G+LFK++ LCIP +S R FLI E H G A H GRD+TL+
Sbjct: 432 IPWEQCQSGKPSSDYTLRHGFLFKANCLCIPNSSWRQFLIKEAHCGNLAAHVGRDRTLSQ 491
Query: 3040 REERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIGLPR 2861
+ RFYWP LS+DV + V C CQ K QNTGLY PLP P+ W+DLS+DFV+GLPR
Sbjct: 492 LQVRFYWPHLSRDVTRFVERCSVCQTFKGTTQNTGLYLPLPTPDSIWEDLSLDFVLGLPR 551
Query: 2860 TSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDTKFV 2681
T DSI VVVDRFSKMAHFIPC KT DA HVARLFFKEIVRLHG+P ++ SDRD KFV
Sbjct: 552 TRTGADSIMVVVDRFSKMAHFIPCKKTYDAVHVARLFFKEIVRLHGVPRSLTSDRDVKFV 611
Query: 2680 SHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPTAEF 2501
SHFW LWK L T+LN S+ YHPQ+DGQTEVVNRTLGN+LRCLV +HP W+++L AEF
Sbjct: 612 SHFWRELWKRLHTELNLSSAYHPQTDGQTEVVNRTLGNMLRCLVQDHPKKWEEVLSQAEF 671
Query: 2500 AFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKT--SQSALTFAQHILKIHNEVKN 2327
AFNS NR+TG PF I P +D+A LP T SQ+A F + ++H +
Sbjct: 672 AFNSMPNRSTGHCPFSIVYTKMPNHVVDVAVLPKCRSTAASQAADQFKNIVDRVHAQ--- 728
Query: 2326 HIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKIN 2150
+ SN KY+ A+ HKR SF+ GDLV+ R RKER G + KL + + PF + +KIN
Sbjct: 729 -LTESNRKYKEQADLHKRFKSFEPGDLVMLRVRKERLPMGTYTKLSPRKIGPFPVLRKIN 787
Query: 2149 DNAYTLDLPAKMDIHPTVNVEDLTLYKEPIHIEEPAKDANEVKAIISEQQKFTKQGVN 1976
DNAY +DLPA++ T NV D IH P DAN V + S + +++G N
Sbjct: 788 DNAYVIDLPAELHTSSTFNVSD-------IHSYHPPDDANTV--LTSPETSSSEEGEN 836
>gb|PKU87496.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 999
Score = 914 bits (2362), Expect = 0.0
Identities = 451/831 (54%), Positives = 577/831 (69%), Gaps = 2/831 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
R +++LL+KG I+ SLSPCA+P LL KKDGTWRMCID RAINKI VK FP+PRLDD+L
Sbjct: 172 RMIEDLLSKGLIQPSLSPCAIPALLVLKKDGTWRMCIDSRAINKITVKYRFPVPRLDDML 231
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D ++G+ F+KLDLRSGYHQ+RIR GDEWKTAFKT +GLYEW VMPFGL NAP+TFMRLM
Sbjct: 232 DKLTGATIFSKLDLRSGYHQIRIRPGDEWKTAFKTREGLYEWRVMPFGLCNAPATFMRLM 291
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
N+VLKP +GK VVYFDDIL+FS + H++HL + ILK KL+LN KC F V
Sbjct: 292 NEVLKPILGKCCVVYFDDILVFSPSLQAHLEHLSSVFAILKAHKLYLNFPKCEFATGSVH 351
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGF+I+ G+ DP K++AI +WPTP +I E+ SF GLA FYRRFI GFS I+AP+T C
Sbjct: 352 FLGFVISSDGVLTDPQKVRAIAEWPTPKSIPEIRSFVGLANFYRRFIRGFSIIIAPLTEC 411
Query: 3766 LQKKTFEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHPI 3587
L+ K+ W + +F +K +TSAPVL +P+F K F+VD DA VGIG LSQ+G P+
Sbjct: 412 LKDKSLHWTNEQQNSFDTIKGALTSAPVLAIPDFDKPFLVDTDASSVGIGAVLSQEGRPV 471
Query: 3586 TFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLNP 3407
FFSEKL+ RQ +S Y++EFYAV+++LK W HYL+H++F+L SD+QAL ++NSQ +N
Sbjct: 472 EFFSEKLSPSRQNWSAYEQEFYAVVRALKQWEHYLLHQDFVLCSDNQALQFINSQKTVNK 531
Query: 3406 RHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPDF 3227
HA+W FLQ+++FVLKHKSG QN+VADALSRR G +++ YA DF
Sbjct: 532 MHARWTTFLQRFSFVLKHKSGVQNRVADALSRRSALVVQLQTELQGLSSIQELYATDKDF 591
Query: 3226 NKIFNDISENSCL-HHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKT 3050
+ ++S +S + HDYSI YLFK+ +CIP +S R +LI E+H GG A H GR KT
Sbjct: 592 AAPWAELSNSSTVSFHDYSISHNYLFKAGLVCIPESSWREYLIQELHSGGLAAHAGRTKT 651
Query: 3049 LTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIG 2870
L + RF+WP L +DV + V C CQ+ K QNTGLY PLP+P W+DLSMDFV+G
Sbjct: 652 LEQMQSRFFWPHLRRDVTRFVEKCPICQVYKGSAQNTGLYMPLPVPNSIWEDLSMDFVLG 711
Query: 2869 LPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDT 2690
LPRT DSI VVVDRFSKMAHF+ C KT DA +VA LFFKEIVRLHGLP +I SDRD
Sbjct: 712 LPRTKRGADSIMVVVDRFSKMAHFLACRKTFDALNVAILFFKEIVRLHGLPRSITSDRDV 771
Query: 2689 KFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPT 2510
KFVSHFW LWK L T++ S+ YHPQ+DGQTEVVNR+L ++LRC+ EHP WD L
Sbjct: 772 KFVSHFWRELWKRLRTEIKLSSAYHPQTDGQTEVVNRSLSSMLRCIAHEHPKQWDDYLGQ 831
Query: 2509 AEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVK 2330
AEFA+NS NR+TG PF I P +D+A LP S+SAL ++ K+ +VK
Sbjct: 832 AEFAYNSMANRSTGQCPFSIVYTKLPNHVVDIAILPK--CKSKSALQTTENYTKMLEDVK 889
Query: 2329 NHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKERQQGGNH-KLQAKGMRPFRIKKKI 2153
++ +N Y+ AA+ H+R+V F GDLV+ R R+ER Q G + K + + P I ++I
Sbjct: 890 AKLSAANDSYKLAADAHRRKVVFNPGDLVMVRMRRERFQPGTYSKFSPRKIGPVPIIRRI 949
Query: 2152 NDNAYTLDLPAKMDIHPTVNVEDLTLYKEPIHIEEPAKDANEVKAIISEQQ 2000
NDNAY +DLP + T NV DL YK + DA + I S+++
Sbjct: 950 NDNAYVVDLPPEFHTPATFNVSDLFAYK--------SSDAGVIHTISSDEE 992
Score = 75.1 bits (183), Expect = 2e-09
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Frame = -3
Query: 4959 SYSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNGKKITLLPSLPREIRA 4780
SY V CDV +MD+ I+LGRPW YD+ H GR+N + F +KI L P+L +
Sbjct: 11 SYICEVLCDVLDMDICHIILGRPWQYDVGAIHDGRANTFTFDWKSRKIRLWPNLSQ---- 66
Query: 4779 SHSKGKAIERTKTISLLQAQPFMKES--QETGIIYSLVCKQTDEASVSETPPEVLRLLEE 4606
KT L+ + P + +S + + ++ +V ++ +++ P +V LL+
Sbjct: 67 ---PDSKTSLEKTAMLIVSGPNLIDSWKESSDMLALMVADSHPDSQLADLPTDVQELLQS 123
Query: 4605 YQEITXXXXXXXXXXERSIQHAID 4534
Y++I RS+QH ID
Sbjct: 124 YKDIWPEELPAALPPMRSLQHHID 147
>gb|OWM74668.1| hypothetical protein CDL15_Pgr005248 [Punica granatum]
Length = 1619
Score = 931 bits (2407), Expect = 0.0
Identities = 443/805 (55%), Positives = 580/805 (72%), Gaps = 2/805 (0%)
Frame = -2
Query: 4486 RQVDELLNKGFIRESLSPCAVPTLLTPKKDGTWRMCIDCRAINKINVK*CFPIPRLDDLL 4307
+QVDELL KG++RES+SPC+VP LL PKKDGTWRMC+DCRA+NKI VK +PIPRLDD+L
Sbjct: 728 KQVDELLTKGYVRESMSPCSVPVLLVPKKDGTWRMCVDCRAVNKITVKYRYPIPRLDDML 787
Query: 4306 DMISGSAWFTKLDLRSGYHQVRIREGDEWKTAFKTADGLYEWLVMPFGLTNAPSTFMRLM 4127
D + GS F+K+DL+SGYHQ+R++EGDEWKTAFKT GLYEWLVMPFGLTNAPSTFMRLM
Sbjct: 788 DELHGSTIFSKIDLKSGYHQIRMKEGDEWKTAFKTKSGLYEWLVMPFGLTNAPSTFMRLM 847
Query: 4126 NQVLKPYIGKFLVVYFDDILIFSNNKDEHMKHLQATLEILKKEKLFLNIKKCVFMANEVE 3947
N VL+ YIGKF+VVYFDDILI+S + +HM HL+ LE+L+ EKL+ N+KKC F V
Sbjct: 848 NHVLRAYIGKFVVVYFDDILIYSKTEHDHMNHLRCVLEVLRHEKLYANLKKCEFFLESVV 907
Query: 3946 FLGFIITDSGLKADPAKIKAIVDWPTPTTITEVHSFHGLATFYRRFIHGFSTIVAPITNC 3767
FLGF+++ G++ D K+KAI +WPTPTTI EV SFHGLA FYRRF+ FST+ AP+T
Sbjct: 908 FLGFVVSSKGVEVDEEKVKAIREWPTPTTIAEVRSFHGLAGFYRRFVRNFSTVAAPLTEI 967
Query: 3766 LQKKT-FEWNPSAERAFCELKDRITSAPVLRLPNFSKVFIVDCDAFGVGIGGTLSQKGHP 3590
++K+ F W E AF LK++++SAP+L LP+FSK F ++CDA G+GIG L Q+ P
Sbjct: 968 IKKEVGFRWGKEQENAFNTLKEKLSSAPLLILPDFSKPFEIECDASGIGIGAVLMQEKRP 1027
Query: 3589 ITFFSEKLNSVRQRYSTYDKEFYAVIQSLKHWRHYLIHKEFILNSDHQALVYLNSQTKLN 3410
I +FSEKLN YSTYDKE YA++++L+ W+HYL KEFI+++DH++L +L Q+KLN
Sbjct: 1028 IAYFSEKLNGAALNYSTYDKELYALVRALETWQHYLWSKEFIIHTDHESLKHLKGQSKLN 1087
Query: 3409 PRHAKWIEFLQQYTFVLKHKSGTQNKVADALSRRXXXXXXXXXXXTGFERLRDEYAICPD 3230
RH +WIEF++ + +V+++K G +N VADALSRR GFE +++ Y D
Sbjct: 1088 RRHTRWIEFIEMFPYVIQYKKGKENVVADALSRRYTLISTLDAKLLGFEYIKELYLHDHD 1147
Query: 3229 FNKIFNDISENSCLHHDYSIKDGYLFKSSKLCIPRTSLRNFLIWEIHGGGSAGHHGRDKT 3050
F ++F++ + + + +GYLF+ +KLCIP++S+R L+ E HGGG GH G KT
Sbjct: 1148 FKEVFSECEKGA--FDKFYKHEGYLFRENKLCIPQSSMRELLVREAHGGGLMGHFGVAKT 1205
Query: 3049 LTLREERFYWPTLSKDVAKIVGHCKTCQISKTQKQNTGLYTPLPIPEGPWQDLSMDFVIG 2870
L + E F+WP + +DV +I C TC+ +K++ Q GLY PLP+P PW D+SMDFV+G
Sbjct: 1206 LDVLREHFFWPHMKRDVERICLRCVTCKKAKSKIQPHGLYMPLPVPSHPWTDVSMDFVLG 1265
Query: 2869 LPRTSAHHDSIYVVVDRFSKMAHFIPCSKTTDASHVARLFFKEIVRLHGLPLTIVSDRDT 2690
LPRT DSI+VVVDRFSKMAHFIPC KT DA+HVA LFFKE+VRLHG+P TIVSDRD
Sbjct: 1266 LPRTKNGKDSIFVVVDRFSKMAHFIPCKKTDDATHVAGLFFKEVVRLHGIPRTIVSDRDV 1325
Query: 2689 KFVSHFWITLWKLLGTKLNFSTTYHPQSDGQTEVVNRTLGNILRCLVGEHPGNWDKLLPT 2510
KF+SHFW LW LGTKL FSTT HPQ+DGQTEVVNRTLG +LR ++ + +W+ +P
Sbjct: 1326 KFLSHFWRVLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRAVIKRNVKSWEDCIPF 1385
Query: 2509 AEFAFNSAINRTTGFSPFQITLGYQPRKPIDLAPLPTPFKTSQSALTFAQHILKIHNEVK 2330
EFA+N A++ +T FSPF++ G+ P P+DL PLP S A+ + KIH E +
Sbjct: 1386 IEFAYNRAMHSSTKFSPFEVVYGFNPLTPLDLTPLPIGEIVSLDGKRKAELVKKIHEEAR 1445
Query: 2329 NHIAVSNLKYQTAANTHKRQVSFKEGDLVIFRNRKER-QQGGNHKLQAKGMRPFRIKKKI 2153
NHI N + T AN ++ V+F+ GD V RKER KL +G PF++ +KI
Sbjct: 1446 NHILHKNEQAATRANKGRKHVTFEPGDWVWVHFRKERFSSQRKSKLNPRGDGPFQVLEKI 1505
Query: 2152 NDNAYTLDLPAKMDIHPTVNVEDLT 2078
NDNAY LDLP + + T NV DL+
Sbjct: 1506 NDNAYKLDLPGEYQVSSTFNVSDLS 1530
Score = 113 bits (282), Expect = 7e-21
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Frame = -1
Query: 6296 RGYQYRTRDEDDALKSLRMTPPIFEGSTDTQGYLDWQILIEQYFECYAIPEKSKVKYAKF 6117
RG + D + S+++T P F+G +D Y++W+ +E F+C+ E+ KVK A
Sbjct: 111 RGRRQERDTVDRNMGSIKLTIPPFQGKSDPDIYIEWERRVELVFDCHNYSEEKKVKLAAV 170
Query: 6116 LLRGSTQLYWGSVERQMERRSLEPINSWEIMKLKLNEKYVSPHYRQRIYNQLSRLIQGND 5937
++W + R PI++WE MK + ++V HY + +Y +L L QG+
Sbjct: 171 AFTDYAIVWWDQLTVSRRRNGERPIDNWEGMKAVMRRRFVPSHYYRDLYLKLQNLKQGSK 230
Query: 5936 TVPEYMNKLDNLLIQCDLNEEPWVTVSRFKGGLRPEIKRALMYHPIDNIHDAYQLACEIE 5757
TV EY +++ +I+ ++ E+ T++RF GL EI + H + + +A ++E
Sbjct: 231 TVEEYHKEMEIAMIRANVEEDREATMARFISGLNREIANIVELHHYVELEELVHMAMKVE 290
Query: 5756 YEMKQ-SRYSQLVPKNPINTK------TLGPRGHSSNISNSSVPNTQ------------K 5634
++K+ R S + N+K GP+ S + N
Sbjct: 291 RQLKKGGRSSSRFESSNSNSKWTSKFEGAGPKWTGSKQEEKAKGNKPATKPSSDSKERGN 350
Query: 5633 SISLPNK---VTCFKCSQPGHLARDCKKK 5556
S S P + V CF+C GH A C K
Sbjct: 351 SSSQPQRNRDVKCFRCLGSGHYASQCPNK 379
Score = 104 bits (260), Expect = 2e-18
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Frame = -3
Query: 5175 KRTSLFYTYTKCNGKVCKIVIDSGSSLNVISKAASTKFALILENHPKPYNISWVDQT-HV 4999
+R ++FYT +VC ++ID GS++NV SK K L + HP+PY + W++++ +
Sbjct: 439 QRENIFYTRCHVKDRVCGLIIDGGSTVNVASKLMVEKLGLSTQKHPRPYRLQWLNESGEL 498
Query: 4998 PVAHRCCVPLQLSSYSGHVWCDVANMDVADILLGRPWLYDLDVTHRGRSNIYEFMHNGKK 4819
V + + + Y V CDV M + +LLGRPW +D TH G N Y F+ +G+
Sbjct: 499 KVTKQVLISFSIGKYHDEVLCDVVPMIASHLLLGRPWQFDRRTTHDGYKNRYSFIKDGRS 558
Query: 4818 ITLLPSLPREI-----RASHSKGKAIERTKTISLLQAQPFMKESQ 4699
+TL P P ++ + S ++ + +K + A+P KES+
Sbjct: 559 MTLAPLPPHQVFEEQLQIKRSSAESSKESKRV----AEPKEKESK 599