BLASTX nr result

ID: Cheilocostus21_contig00014572 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00014572
         (1098 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009420616.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   209   7e-59
ref|XP_008810544.1| PREDICTED: uncharacterized protein DDB_G0287...    96   5e-18
ref|XP_010943956.1| PREDICTED: uncharacterized protein DDB_G0287...    82   3e-13
ref|XP_008789780.1| PREDICTED: arginine/serine-rich coiled-coil ...    80   1e-12
ref|XP_010929197.1| PREDICTED: serine/arginine repetitive matrix...    73   2e-10

>ref|XP_009420616.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Musa acuminata
            subsp. malaccensis]
 ref|XP_009420617.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Musa acuminata
            subsp. malaccensis]
          Length = 552

 Score =  209 bits (531), Expect = 7e-59
 Identities = 142/372 (38%), Positives = 195/372 (52%), Gaps = 9/372 (2%)
 Frame = +3

Query: 3    KSRRRSR-KDGVEERGRNRQRRTVNYDLEDDXXXXXXXXXXXXXXXXXXXXXXXXQ---- 167
            +SR R R +DG  ERGR R+RRT ++D   +                        +    
Sbjct: 137  RSRSRGRGRDGDAERGRGRRRRTTSFDRRGNRYRSRSCSTCGGSRSSGRTGGSACRSRSC 196

Query: 168  GEDKYEEIGKAKSTRSALSVAAERQEVQVGTDGKGEQRDRIIHAXXXXXXXXXXXXXXXX 347
             E+KY EI + +  RS L++A +R+ V+ G  GK EQ DRII +                
Sbjct: 197  SEEKYREIEQPRRLRSILAMAEDREVVEGGFHGKDEQGDRIIQSYDDFDRYDGGRKSDTH 256

Query: 348  XEAPGRNSLQDATKGAGSTHHEDGEAGFNQTDENLLGNVDVDDGNFNWRK--NLGGSESV 521
             ++P RN+  D    A + + +D E   + + E  + N D    +F  +K  N GG E+V
Sbjct: 257  QDSPQRNAKNDEAL-AKNGNAKDSEMVLSISGEQTIENADGGGDDFTRKKKDNSGGPEAV 315

Query: 522  DLETQLRIKALENLKKFKRSLSANTRSDSNQENDSTETLCHKDTTRATTPHCIVKSLDGK 701
            +LE+QLR +AL+N  KF+RSLSANTRS   QE+DS++  C KD  +        KS DGK
Sbjct: 316  ELESQLRQRALDNFAKFRRSLSANTRSTGCQEDDSSQPQCGKDPIKVAEAQDAFKSSDGK 375

Query: 702  LVSPFEKQEILDKEIWHAKPRLRSVINIPAERDTSSGVISHQSSSESYRKLDEIAPDNSI 881
                 E Q  +  E+  A+PR+RSV+NIPAE+DTSS VI  QSSS S RK +E  PDNS 
Sbjct: 376  FAVSHECQGGVQGEVRRAEPRVRSVVNIPAEKDTSSHVIRRQSSSGSSRKENEQDPDNSN 435

Query: 882  GYLGNTQLLKWTEESPDKTFLQAS--IKEKQERQSATETGGIIADDSAVKQANGQPSSGL 1055
                +   L W EE  +K  LQ S  IK+KQE+ +A E       D+AV Q+ GQP+S L
Sbjct: 436  KSQSDPTQLNWIEEPSNKMSLQHSSLIKDKQEKSAAAEPESSTVCDAAVNQSVGQPTSAL 495

Query: 1056 STHHEKGNEEEN 1091
                   +E EN
Sbjct: 496  PADQRIESENEN 507


>ref|XP_008810544.1| PREDICTED: uncharacterized protein DDB_G0287625 [Phoenix dactylifera]
          Length = 565

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 101/362 (27%), Positives = 149/362 (41%), Gaps = 14/362 (3%)
 Frame = +3

Query: 3    KSRRRSRKDGVEERGRNRQR-RTVNYDLEDDXXXXXXXXXXXXXXXXXXXXXXXXQGEDK 179
            KSR RSR     ERGR+R+  +  NY+ +D                           E K
Sbjct: 166  KSRERSRSKS-RERGRSRRSSQRTNYERDDGRYCENSSSHSSRGYNRSWSY-----NEGK 219

Query: 180  YEEIGKAKSTRSALSVAAERQEVQVGTDGKGEQRDRIIHAXXXXXXXXXXXXXXXXXEAP 359
             +E+ + +  +S L V  E + ++ G       RD+I+ A                    
Sbjct: 220  CKEVDQPRRLKSTLVVTKESEGMEEGL----RSRDKIVQAYDDVGRNFDAHEQASEDRQV 275

Query: 360  GRNSLQDATK--------GAGSTH---HEDGEAGFNQTDENLLGNVDVDDGNFNWRKNLG 506
                 + AT           G  +     DGE   N      +G+ D    N     N G
Sbjct: 276  DLGGAKHATDTGVEDVACAKGDKYVLTKLDGEPSKNAD----VGSDDSTRKNSGDAVNAG 331

Query: 507  GSESVDLETQLRIKALENLKKFKRSLSANTRSDSNQENDSTETLCHKDTTRATTPHCIVK 686
             SES DLE QLR KALEN +KF+  LS N  + S++++DS  T   KD  R       + 
Sbjct: 332  NSESEDLELQLRQKALENFRKFRGGLSVNASTSSDRKDDSLLTESCKDAGRLVEAKDAII 391

Query: 687  SLDGKLVSPFEKQEILDKEIWHAKPRLRSVINIPAERDTSSGVISHQSSSESYRKLDEIA 866
            S   K  +  ++Q  + +     +PR+RSV+NIP E D  + +ISHQ++ ES R     A
Sbjct: 392  SSKWKSNNSLQRQGSIQRGSCTTQPRIRSVVNIPTEHDDRNSIISHQNAKESSRP----A 447

Query: 867  PDNSIGYLGNTQLLKWTEESPDKTFLQASI--KEKQERQSATETGGIIADDSAVKQANGQ 1040
             D        +  LK  EE  DK      +  K+ Q+R++A E        + +K A+G 
Sbjct: 448  ADGQT----TSNHLKSMEEPLDKVSSGKILLPKDIQDRKAAAEPRSSTTIGTELKIADGS 503

Query: 1041 PS 1046
             S
Sbjct: 504  TS 505


>ref|XP_010943956.1| PREDICTED: uncharacterized protein DDB_G0287625 [Elaeis guineensis]
          Length = 526

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 10/218 (4%)
 Frame = +3

Query: 459  NVDVDDGNFNWRKNLG------GSESVDLETQLRIKALENLKKFKRSLSANTRSDSNQEN 620
            NVDV   + + RKN G       SES DLE  LR KALEN +KF+  LSAN  +  +Q++
Sbjct: 264  NVDVRSDD-SGRKNCGDAVSAGNSESEDLELLLRQKALENFRKFRGGLSANASTSCDQKD 322

Query: 621  DSTETLCHKDTTRATTPHCIVKSLDGKLVSPFEKQEILDKEIWHAKPRLRSVINIPAERD 800
             S  +   KD +R       + S   +  S  + Q  + +     +PR+RSV+NIP   D
Sbjct: 323  GSLHSESCKDASRLVERKDTMVSSKSEFNSSLDHQGSIQRGNCTVQPRIRSVVNIPTVND 382

Query: 801  TSSGVISHQSSSESYRK-LDEIAPDNSIGYLGNTQLLKWTEESPDKTFLQASI--KEKQE 971
              + VIS Q+ SES R  +D I    + G   +   LK  EE  DK     ++  K+ + 
Sbjct: 383  DGNSVISRQNESESSRSAVDPITMSAADGQTTSNH-LKIIEEPLDKVSSGKTLLSKDIRN 441

Query: 972  RQSATETGGIIADDSAVKQANGQPS-SGLSTHHEKGNE 1082
            +++A E        + +  A+G  S +    + E GN+
Sbjct: 442  KKAAAEPRSCTTIGTELNVADGSTSGASACVNVESGNK 479


>ref|XP_008789780.1| PREDICTED: arginine/serine-rich coiled-coil protein 2-like [Phoenix
            dactylifera]
 ref|XP_008789782.1| PREDICTED: arginine/serine-rich coiled-coil protein 2-like [Phoenix
            dactylifera]
 ref|XP_017698316.1| PREDICTED: arginine/serine-rich coiled-coil protein 2-like [Phoenix
            dactylifera]
 ref|XP_017698317.1| PREDICTED: arginine/serine-rich coiled-coil protein 2-like [Phoenix
            dactylifera]
 ref|XP_017698318.1| PREDICTED: arginine/serine-rich coiled-coil protein 2-like [Phoenix
            dactylifera]
          Length = 591

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
 Frame = +3

Query: 456  GNVDVDDGNFNWRKNLGGSESVDLETQLRIKALENLKKFKRSLSANTRSDSNQENDSTET 635
            GN D    N     N G SE  DLE  LR KALEN +KF+           +Q+++S +T
Sbjct: 333  GNYDSTRKNGGDAVNAGSSEPEDLELLLRQKALENFRKFRGGFLEQKGMSGDQKDESIQT 392

Query: 636  LCHKDTTRATTPHCIVKSLDGKLVSPFEKQEILDKEIWHAKPRLRSVINIPAERDTSSGV 815
               KD  R       + S D K  S  E Q  +   I   +PRLRS++NIP +    + +
Sbjct: 393  EPCKDDGRFVEAKDTIVSSDCKFASSLECQGSIQGGIPMTQPRLRSIVNIPTQNADGNSI 452

Query: 816  ISHQSSSESYRKLDEIAPDNSIGYLGNTQLLKWTEESPDKTFLQASI--KEKQERQSATE 989
            IS Q++SES R        ++         LK  EE  DK     ++  K+ Q +++  E
Sbjct: 453  ISCQNASESSRPAVNSIVTSTADGQTTPNHLKSKEEPLDKFSSGKTLLAKDIQNKKAVVE 512

Query: 990  TGGIIADDSAVKQANGQPSSGLST 1061
             G        +K A+G  +SG ST
Sbjct: 513  PGSSATIGDELKIADGS-ASGAST 535


>ref|XP_010929197.1| PREDICTED: serine/arginine repetitive matrix protein 2 [Elaeis
            guineensis]
 ref|XP_010929206.1| PREDICTED: serine/arginine repetitive matrix protein 2 [Elaeis
            guineensis]
 ref|XP_010929217.1| PREDICTED: serine/arginine repetitive matrix protein 2 [Elaeis
            guineensis]
          Length = 619

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 83/312 (26%), Positives = 124/312 (39%), Gaps = 20/312 (6%)
 Frame = +3

Query: 171  EDKYEEIGKAKSTRSALSVAAERQEVQVGTDGKGEQRDRIIHAXXXXXXXXXXXXXXXXX 350
            E K +E+ + +  +SA  +  E +E++ G  G    RD+II                   
Sbjct: 264  EGKVKEVDQPRRLKSAFVLTKESEEME-GLRG----RDKIIQGYDDLGRSFDAY------ 312

Query: 351  EAPGRNSLQDATKGAGSTHHEDG----EAGFNQTDENLL-------------GNVDVDDG 479
                  +L D     G   H  G    +  + + D+ +L             GN D    
Sbjct: 313  ----EQALDDRQVELGGEKHSTGTWVEDTAYVKGDKYVLTQLITEPAKNADFGNYDSTRK 368

Query: 480  NFNWRKNLGGSESVDLETQLRIKALENLKKFKRSLSANTRSDSNQENDSTETLCHKDTTR 659
            N     N G SE  DLE  LR KALEN +KF+    A   +  NQ+++S +     +  R
Sbjct: 369  NSRDAVNAGSSEPEDLEMLLRQKALENFRKFRGGFLAQKGTSGNQKDESIQNEPCTNAGR 428

Query: 660  ATTPHCIVKSLDGKLVSPFEKQEILDKEIWHAKPRLRSVINIPAERDTSSGVISHQSSSE 839
                   + S + K  S  E Q      I   +PR+RS+++IP E    + +I  Q+SSE
Sbjct: 429  FVEAKDTIVSSNCKSTSSLECQGSGQGGIPMTQPRIRSIVSIPTENGDGNSIICCQNSSE 488

Query: 840  SYR-KLDEIAPDNSIGYLGNTQLLKWTEESPDK--TFLQASIKEKQERQSATETGGIIAD 1010
            S R  +D I    + G       LK  EE  DK  +    S K+ Q   +  E G     
Sbjct: 489  SSRPAVDPIVASAADGQTAPNH-LKRKEEPLDKVSSGKTLSAKDIQNENAVAEPGSSATI 547

Query: 1011 DSAVKQANGQPS 1046
               +K A+G  S
Sbjct: 548  GDELKIADGSAS 559


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