BLASTX nr result

ID: Cheilocostus21_contig00014425 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00014425
         (750 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018685181.1| PREDICTED: nuclear transcription factor Y su...    65   3e-09
ref|XP_009413487.1| PREDICTED: nuclear transcription factor Y su...    65   9e-09
ref|XP_018678185.1| PREDICTED: nuclear transcription factor Y su...    64   5e-08

>ref|XP_018685181.1| PREDICTED: nuclear transcription factor Y subunit A-3-like isoform
           X2 [Musa acuminata subsp. malaccensis]
          Length = 193

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/88 (45%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
 Frame = -3

Query: 238 HGNQVKHPGHQMRXXXXXXXXXXXXXXXXXSGMSECDNPADF---------TQKKPVEGH 86
           +GNQ+KH GHQM                  S  S+C+N             T KKPVE H
Sbjct: 7   NGNQLKHLGHQMHNQNSPSTQSTGQPHQEVSETSDCNNHEQHISSQSGVNNTPKKPVECH 66

Query: 85  MRAILSLGAPE-TICTPKLDCSQPSACI 5
           M+A+LSLGA E T   PKLDCSQP ACI
Sbjct: 67  MKAVLSLGASEATYAPPKLDCSQPFACI 94


>ref|XP_009413487.1| PREDICTED: nuclear transcription factor Y subunit A-3-like isoform
           X1 [Musa acuminata subsp. malaccensis]
 ref|XP_018685180.1| PREDICTED: nuclear transcription factor Y subunit A-3-like isoform
           X1 [Musa acuminata subsp. malaccensis]
          Length = 291

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 40/88 (45%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
 Frame = -3

Query: 238 HGNQVKHPGHQMRXXXXXXXXXXXXXXXXXSGMSECDNPADF---------TQKKPVEGH 86
           +GNQ+KH GHQM                  S  S+C+N             T KKPVE H
Sbjct: 7   NGNQLKHLGHQMHNQNSPSTQSTGQPHQEVSETSDCNNHEQHISSQSGVNNTPKKPVECH 66

Query: 85  MRAILSLGAPE-TICTPKLDCSQPSACI 5
           M+A+LSLGA E T   PKLDCSQP ACI
Sbjct: 67  MKAVLSLGASEATYAPPKLDCSQPFACI 94


>ref|XP_018678185.1| PREDICTED: nuclear transcription factor Y subunit A-7 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018678186.1| PREDICTED: nuclear transcription factor Y subunit A-7 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018678187.1| PREDICTED: nuclear transcription factor Y subunit A-7 [Musa
           acuminata subsp. malaccensis]
          Length = 322

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
 Frame = -3

Query: 271 NKVNTKMNFLA-HGNQVKHPGHQMRXXXXXXXXXXXXXXXXXSGMSECDN---------P 122
           + ++  M+FLA HGNQ+KH G QM                  SG SEC+N          
Sbjct: 21  DNLSMHMDFLAQHGNQMKHLGDQMPDQNSSSTQSSGQAHQEVSGTSECNNHEQYISAHSA 80

Query: 121 ADFTQKKPVEGHMRAILSLGAPE-TICTPKLDCSQPSACI 5
            D T +K VEGHM+A+L+LG PE +   P+ D +QP ACI
Sbjct: 81  TDNTHEKQVEGHMKAVLTLGTPEASSAPPRFDYNQPFACI 120


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