BLASTX nr result
ID: Cheilocostus21_contig00013979
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00013979
(1787 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron sp... 599 0.0
ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron sp... 599 0.0
ref|XP_008797623.1| PREDICTED: chloroplastic group IIA intron sp... 526 e-175
ref|XP_010922095.1| PREDICTED: chloroplastic group IIA intron sp... 521 e-173
ref|XP_006660084.2| PREDICTED: chloroplastic group IIA intron sp... 508 e-171
ref|XP_020251625.1| chloroplastic group IIA intron splicing faci... 499 e-167
ref|XP_004973284.1| chloroplastic group IIA intron splicing faci... 502 e-167
gb|ONK81731.1| uncharacterized protein A4U43_C01F32310 [Asparagu... 499 e-166
gb|ONM04948.1| chloroplast RNA splicing1 [Zea mays] 492 e-166
gb|PAN34705.1| hypothetical protein PAHAL_F03029 [Panicum hallii] 498 e-165
ref|XP_002444215.1| chloroplastic group IIA intron splicing faci... 497 e-165
ref|XP_020705251.1| chloroplastic group IIA intron splicing faci... 494 e-163
ref|XP_008648227.1| chloroplastic group IIA intron splicing faci... 492 e-163
gb|ONM04944.1| chloroplast RNA splicing1 [Zea mays] 486 e-161
ref|XP_008648226.1| chloroplastic group IIA intron splicing faci... 485 e-160
ref|NP_001105008.1| chloroplastic group IIA intron splicing faci... 483 e-160
ref|XP_020094505.1| chloroplastic group IIA intron splicing faci... 481 e-160
gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indi... 476 e-160
ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron sp... 483 e-159
ref|XP_020571490.1| chloroplastic group IIA intron splicing faci... 481 e-159
>ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 768
Score = 599 bits (1545), Expect = 0.0
Identities = 323/495 (65%), Positives = 374/495 (75%), Gaps = 6/495 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLN--KSHDAVD-TNNEVLGDNSTIIS---VNSDGLINGPI 1358
VVW RD +VVYRG+KY MF N S +AV+ N + ++S I+S V DG +
Sbjct: 286 VVWCKRDFLVVYRGQKYEMFRNAPSSPNAVNKVNPGIFEEDSAIVSGSVVKMDGEVQ--- 342
Query: 1357 AKDRNVHCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPE 1178
+ + D+S IEGSLYEREA+RLL GLGPRF+DWWW+KPLPVDADLLPE
Sbjct: 343 IMESGIQMGDIS---------IEGSLYEREADRLLDGLGPRFVDWWWQKPLPVDADLLPE 393
Query: 1177 VVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKK 998
VVPGF+PPLRMCP G R KLTDDEL YLRKLAR LPTHFALGRN KL+GLA SI KLW+K
Sbjct: 394 VVPGFRPPLRMCPPGVRPKLTDDELMYLRKLARPLPTHFALGRNRKLQGLAASIRKLWEK 453
Query: 997 SLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGR 818
SLIAKIAVKVGIQNT+NEQMSL LKRLTGGVLILRNKFFIILYRGKDFLP G+ LI+ R
Sbjct: 454 SLIAKIAVKVGIQNTNNEQMSLELKRLTGGVLILRNKFFIILYRGKDFLPGGVTNLIDER 513
Query: 817 EAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRI 638
EAE++EQQL+EE AR +TNS ++ I+P +S VG+YMEF++IQAN+I+ ++ R +I
Sbjct: 514 EAELNEQQLEEEKARTGFTNSLRAMDNILPSFSIVGTYMEFQEIQANHISLNNLSYRGQI 573
Query: 637 QIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQA 458
+I LFI+KQKIE+S++ L+KL S C SEQ D E LTEEERQA
Sbjct: 574 RIEAEREKLKKELREHEHKLFILKQKIERSEELLSKLSLSCCPSEQTADLEILTEEERQA 633
Query: 457 FRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIES 278
FRKVGL M+E+I LGRRGIYDG+ SIHQHWKHREV KV TKQ +T TARLLE+ES
Sbjct: 634 FRKVGLEMNEIILLGRRGIYDGVFGSIHQHWKHREVVKVLTKQKAFHHITCTARLLEVES 693
Query: 277 GGILVAVEKLRTSHAIIIYRGKNYARXXXXXXXXXXKREALQRSIEMQRRGSLKYFARER 98
GGILVAVEKLRTSHAIIIYRGKNYAR KREALQRSIE+QRRGSLKYFAR+R
Sbjct: 694 GGILVAVEKLRTSHAIIIYRGKNYARPLKPSNNLLSKREALQRSIEIQRRGSLKYFARQR 753
Query: 97 EKLIWRLKRRLRDLE 53
EKLIW L +RLR LE
Sbjct: 754 EKLIWELTQRLRKLE 768
Score = 112 bits (281), Expect = 3e-22
Identities = 52/74 (70%), Positives = 67/74 (90%)
Frame = -1
Query: 1787 KRAPWVAAEETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEEV 1608
+RAPWV AEE LVF REKKV+ +T+AESVLAP+LL+RLRG+A+ M +WV+AKKAGVT+ V
Sbjct: 186 QRAPWVTAEEKLVFGREKKVKVVTSAESVLAPELLFRLRGEARRMTRWVKAKKAGVTQGV 245
Query: 1607 VKEIRRGWRKNELV 1566
++EIRRGW++NELV
Sbjct: 246 MEEIRRGWKENELV 259
>ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 769
Score = 599 bits (1545), Expect = 0.0
Identities = 323/495 (65%), Positives = 374/495 (75%), Gaps = 6/495 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLN--KSHDAVD-TNNEVLGDNSTIIS---VNSDGLINGPI 1358
VVW RD +VVYRG+KY MF N S +AV+ N + ++S I+S V DG +
Sbjct: 287 VVWCKRDFLVVYRGQKYEMFRNAPSSPNAVNKVNPGIFEEDSAIVSGSVVKMDGEVQ--- 343
Query: 1357 AKDRNVHCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPE 1178
+ + D+S IEGSLYEREA+RLL GLGPRF+DWWW+KPLPVDADLLPE
Sbjct: 344 IMESGIQMGDIS---------IEGSLYEREADRLLDGLGPRFVDWWWQKPLPVDADLLPE 394
Query: 1177 VVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKK 998
VVPGF+PPLRMCP G R KLTDDEL YLRKLAR LPTHFALGRN KL+GLA SI KLW+K
Sbjct: 395 VVPGFRPPLRMCPPGVRPKLTDDELMYLRKLARPLPTHFALGRNRKLQGLAASIRKLWEK 454
Query: 997 SLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGR 818
SLIAKIAVKVGIQNT+NEQMSL LKRLTGGVLILRNKFFIILYRGKDFLP G+ LI+ R
Sbjct: 455 SLIAKIAVKVGIQNTNNEQMSLELKRLTGGVLILRNKFFIILYRGKDFLPGGVTNLIDER 514
Query: 817 EAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRI 638
EAE++EQQL+EE AR +TNS ++ I+P +S VG+YMEF++IQAN+I+ ++ R +I
Sbjct: 515 EAELNEQQLEEEKARTGFTNSLRAMDNILPSFSIVGTYMEFQEIQANHISLNNLSYRGQI 574
Query: 637 QIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQA 458
+I LFI+KQKIE+S++ L+KL S C SEQ D E LTEEERQA
Sbjct: 575 RIEAEREKLKKELREHEHKLFILKQKIERSEELLSKLSLSCCPSEQTADLEILTEEERQA 634
Query: 457 FRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIES 278
FRKVGL M+E+I LGRRGIYDG+ SIHQHWKHREV KV TKQ +T TARLLE+ES
Sbjct: 635 FRKVGLEMNEIILLGRRGIYDGVFGSIHQHWKHREVVKVLTKQKAFHHITCTARLLEVES 694
Query: 277 GGILVAVEKLRTSHAIIIYRGKNYARXXXXXXXXXXKREALQRSIEMQRRGSLKYFARER 98
GGILVAVEKLRTSHAIIIYRGKNYAR KREALQRSIE+QRRGSLKYFAR+R
Sbjct: 695 GGILVAVEKLRTSHAIIIYRGKNYARPLKPSNNLLSKREALQRSIEIQRRGSLKYFARQR 754
Query: 97 EKLIWRLKRRLRDLE 53
EKLIW L +RLR LE
Sbjct: 755 EKLIWELTQRLRKLE 769
Score = 112 bits (281), Expect = 3e-22
Identities = 52/74 (70%), Positives = 67/74 (90%)
Frame = -1
Query: 1787 KRAPWVAAEETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEEV 1608
+RAPWV AEE LVF REKKV+ +T+AESVLAP+LL+RLRG+A+ M +WV+AKKAGVT+ V
Sbjct: 186 QRAPWVTAEEKLVFGREKKVKVVTSAESVLAPELLFRLRGEARRMTRWVKAKKAGVTQGV 245
Query: 1607 VKEIRRGWRKNELV 1566
++EIRRGW++NELV
Sbjct: 246 MEEIRRGWKENELV 259
>ref|XP_008797623.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Phoenix dactylifera]
Length = 810
Score = 526 bits (1356), Expect = e-175
Identities = 286/509 (56%), Positives = 350/509 (68%), Gaps = 15/509 (2%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGP------- 1361
VVW RD +VV+RG Y + SH++ T + + ++ DG P
Sbjct: 284 VVWHRRDTLVVHRGSNYSLVPEASHNSAITIGGEASSSKLNLGISEDGGAIPPTKCDEIT 343
Query: 1360 ----IAKDRNVHCTDLSNVHFETQNS---IEGSLYEREANRLLSGLGPRFIDWWWKKPLP 1202
I +D ++ T SN+ +E QN+ I+G+LYERE +RLL GLGPRFIDWWW+KPLP
Sbjct: 344 NISVIQQDGDIENTHTSNMEWEIQNAAEAIKGTLYEREVDRLLDGLGPRFIDWWWRKPLP 403
Query: 1201 VDADLLPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLAT 1022
VDADLLPE VP F+PP R+CP + KLTD+ELTYLRKLA LPTHFALG+ KL+GLA
Sbjct: 404 VDADLLPEFVPNFRPPFRLCPPLMKAKLTDEELTYLRKLAHPLPTHFALGKIRKLQGLAA 463
Query: 1021 SIIKLWKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDG 842
+IIKLW+KSLIAKIAVKVGI N +N+QMS LKRLTGGVLILRNK FIILYRGKDFL
Sbjct: 464 AIIKLWEKSLIAKIAVKVGIPNINNKQMSCELKRLTGGVLILRNKDFIILYRGKDFLSAR 523
Query: 841 MAELIEGREAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATH 662
+A I RE EI QQLKEE AR N F I+ + TVG+Y EF+DIQ+ Y A +
Sbjct: 524 VASSIAERETEICGQQLKEELARTNAINLFSDIDEFLYSTGTVGTYTEFQDIQSKYTAVN 583
Query: 661 DPHNRCRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQET 482
+ +IQ LFI+K+KIEKS+K+L KL W SE+ DQE
Sbjct: 584 SGISEEKIQFEAERAKLEKEIRKKERELFIIKRKIEKSEKELAKLNSQWSPSEEAADQEL 643
Query: 481 LTEEERQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYT 302
L EEERQ FR +GL MDE++ LGRRGIYDG+I +IHQHWKH+EV KV TKQ Q+TYT
Sbjct: 644 LMEEERQTFRNIGLKMDELLLLGRRGIYDGVIGNIHQHWKHKEVVKVITKQQDFHQITYT 703
Query: 301 ARLLEIESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRG 125
A+LLEIESGGILVA+EKLR++HAII+YRGKNY R KREA QRSIE+QRRG
Sbjct: 704 AQLLEIESGGILVAIEKLRSTHAIILYRGKNYGRPLKLLPDNLLTKREAFQRSIEIQRRG 763
Query: 124 SLKYFAREREKLIWRLKRRLRDLERQIEE 38
SLKYFAR+R+K I LK+R+RDL+ + ++
Sbjct: 764 SLKYFARQRQKSICALKQRVRDLKTRTKK 792
Score = 101 bits (251), Expect = 2e-18
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = -1
Query: 1787 KRAPWVAAEETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEEV 1608
+R+PWV E+ LVFRREKK R+ TAAE L D+L RLRG+A+ MKKWV+AKKAGVT+EV
Sbjct: 184 RRSPWVGVEKKLVFRREKKARQPTAAELTLTGDVLARLRGEARRMKKWVKAKKAGVTQEV 243
Query: 1607 VKEIRRGWRKNEL 1569
V EIRR W K EL
Sbjct: 244 VDEIRRTWSKGEL 256
>ref|XP_010922095.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Elaeis guineensis]
ref|XP_010922108.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Elaeis guineensis]
Length = 796
Score = 521 bits (1341), Expect = e-173
Identities = 288/510 (56%), Positives = 354/510 (69%), Gaps = 16/510 (3%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDT----------NNEVLGDNSTIISVNSDGLI 1370
VVW R +VVYRG Y + SH++ T N + D I+ SD +
Sbjct: 280 VVWRKRYTLVVYRGSNYSLIPEASHNSAITIGGKASSSKLNLGISEDGGAILPTKSDEIT 339
Query: 1369 N-GPIAKDRNVHCTDLSNVHFETQNS---IEGSLYEREANRLLSGLGPRFIDWWWKKPLP 1202
N I +D +V + S++ +E +N+ IEG+LYERE +RLL GLGPRFIDWWW+KPLP
Sbjct: 340 NISVIQQDGDVENSHTSSMAWEIRNAAEAIEGTLYEREVDRLLDGLGPRFIDWWWRKPLP 399
Query: 1201 VDADLLPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLAT 1022
VDADLLPE VP F+PP+R+CP + KL D+ELTYLRKLAR LPTHFALG++ KL+GLA
Sbjct: 400 VDADLLPEFVPNFRPPIRLCPPSMKPKLMDEELTYLRKLARPLPTHFALGKSRKLQGLAA 459
Query: 1021 SIIKLWKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDG 842
+IIKLW+KSLIAKIAVKVGI N +N+QMS LKRLTGGVLILRNK FIILYRGKDFL
Sbjct: 460 AIIKLWEKSLIAKIAVKVGIPNINNQQMSCELKRLTGGVLILRNKDFIILYRGKDFLSGR 519
Query: 841 MAELIEGREAEISEQQLKEEDARIKYTNSF-YTINAIMPRYSTVGSYMEFRDIQANYIAT 665
+A I RE EI QQLKEE AR TN+ + + STVG+Y EF+DIQ+ Y A
Sbjct: 520 VASSIADRETEICGQQLKEEVAR---TNAIKLSSGKFLYSTSTVGTYTEFQDIQSKYTAV 576
Query: 664 HDPHNRCRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQE 485
+ +IQ LFI+KQKIEKS+K+L KL SW +Q DQE
Sbjct: 577 NSGIPEEKIQFEAERAKLEKEIGKQEHELFILKQKIEKSEKELAKLNSSWSPLDQAADQE 636
Query: 484 TLTEEERQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTY 305
LTEEER+ FR +GL MDE + LGRRGIYDG+I +IHQHWKH+EV KV TKQ +Q+TY
Sbjct: 637 LLTEEERRTFRNIGLKMDESLLLGRRGIYDGVIGNIHQHWKHKEVVKVITKQQDFQQITY 696
Query: 304 TARLLEIESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRR 128
TA+LLEIESGGILVA+EKLR++HAII+YRGKNY R KREALQRS E+QRR
Sbjct: 697 TAQLLEIESGGILVAIEKLRSTHAIILYRGKNYCRPLKLLPDNLLTKREALQRSTEIQRR 756
Query: 127 GSLKYFAREREKLIWRLKRRLRDLERQIEE 38
GSLKYFA +R+K I LK+R+RDL+++ ++
Sbjct: 757 GSLKYFAHQRQKSICTLKQRVRDLKKRTKK 786
Score = 101 bits (252), Expect = 1e-18
Identities = 49/72 (68%), Positives = 58/72 (80%)
Frame = -1
Query: 1784 RAPWVAAEETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEEVV 1605
R+PW+ E+ LVFRREKK R+ TAAE L D+L RLRG+A+ MKKWV+AKKAGVT+EVV
Sbjct: 181 RSPWMGVEKKLVFRREKKTRQPTAAELTLPGDVLVRLRGEARRMKKWVKAKKAGVTQEVV 240
Query: 1604 KEIRRGWRKNEL 1569
EIRR WRK EL
Sbjct: 241 DEIRRTWRKGEL 252
>ref|XP_006660084.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic, partial [Oryza brachyantha]
Length = 630
Score = 508 bits (1309), Expect = e-171
Identities = 272/503 (54%), Positives = 344/503 (68%), Gaps = 1/503 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGPIAKDRNV 1340
VVW+ D+ VYRG Y + HD V N EV + ++ N +K +
Sbjct: 126 VVWTKGDIHFVYRGANYIENSKRHHDFVH-NEEV-----SPVTANFPASQGKYGSKAESF 179
Query: 1339 HCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFK 1160
H D S + ++G+LYERE NRLL LGPRF+DWWW PLPVDADLLPEVVPGFK
Sbjct: 180 HENDQSIDVHKDNEPVKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFK 239
Query: 1159 PPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKI 980
P R CP G R L D ELTYLRKLAR LPTHFALGRN KL+GLA +I+KLW+KSLIAKI
Sbjct: 240 TPFRQCPPGVRPTLADQELTYLRKLARPLPTHFALGRNTKLQGLAAAILKLWEKSLIAKI 299
Query: 979 AVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISE 800
AVKVGIQNT++EQM+ LKRLTGG +ILRNK FII+YRGKDFLP +AE + RE+++ +
Sbjct: 300 AVKVGIQNTNHEQMARNLKRLTGGTVILRNKDFIIIYRGKDFLPGDVAESVIERESQVHD 359
Query: 799 QQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXXX 620
QQ KEE+AR+K +S + A+ P S+VG++ E++D Q N+ +N RIQ+
Sbjct: 360 QQAKEEEARLKVVDSLQMLAAVSPEKSSVGTFREYQDFQDNHECGTTENNNVRIQLEAKK 419
Query: 619 XXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVGL 440
L + +KIE+S++ L KL SW SEQ+ D+E LTEEER RK+GL
Sbjct: 420 HLLEKELKDHEWRLSTLTKKIERSNQVLAKLHSSWSPSEQDGDRELLTEEERMILRKIGL 479
Query: 439 AMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILVA 260
MDE + LGRRGI++G+IE IHQHWKH+EV KV TKQ RQ+TYT+ +LE+E+GG+L+A
Sbjct: 480 KMDEHVLLGRRGIFEGVIEEIHQHWKHKEVVKVITKQNQARQITYTSMMLEVETGGMLIA 539
Query: 259 VEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLIW 83
+E+L TSHAII+YRGKNY R KREALQRSIE+QRRGSLKYFA+ER+K I
Sbjct: 540 IERLTTSHAIILYRGKNYRRPSKSSPSNLLTKREALQRSIEVQRRGSLKYFAQERKKSID 599
Query: 82 RLKRRLRDLERQIEETTLTDERP 14
LKRRL ++ R+I + E+P
Sbjct: 600 ELKRRLTNVVREIRKLNHYTEQP 622
Score = 74.3 bits (181), Expect = 4e-10
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + +V RREKKVR T AE+ L P L RLR A+GM +W RAKKAG+T
Sbjct: 21 RAVPWAAARDEELKVVLRREKKVRVPTRAEAELEPAELERLRQLARGMDRWARAKKAGIT 80
Query: 1616 EEVVKEIRRGWRK 1578
+EVV+E+R W +
Sbjct: 81 DEVVEELRGAWAR 93
>ref|XP_020251625.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Asparagus officinalis]
Length = 607
Score = 499 bits (1286), Expect = e-167
Identities = 261/421 (61%), Positives = 317/421 (75%), Gaps = 1/421 (0%)
Frame = -2
Query: 1297 SIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFKPPLRMCPTGERTKL 1118
S SLY REANRLL LGPRF+DWW+KKPLPVDADLLPEVVPGFKPP R+CP ER KL
Sbjct: 177 STNESLYVREANRLLDSLGPRFVDWWYKKPLPVDADLLPEVVPGFKPPFRLCPPEERPKL 236
Query: 1117 TDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKIAVKVGIQNTSNEQM 938
DDELTYLRK+AR LPTHFALG+N KL+GLA +IIKLW+K LIAKIA+KVGI +T+N+QM
Sbjct: 237 RDDELTYLRKIARPLPTHFALGKNTKLQGLAAAIIKLWEKCLIAKIAIKVGIPHTNNQQM 296
Query: 937 SLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISEQQLKEEDARIKYTN 758
LKRLTGGVLILRNKF+IILYRGKDFLP +A + RE E+ +QQL EE+AR K
Sbjct: 297 GQELKRLTGGVLILRNKFYIILYRGKDFLPGKVASSVHEREIELHDQQLLEEEARAKAIA 356
Query: 757 SFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXXXXXXXXXXXXXXXXL 578
+F +IN + + VG++ EF++IQANY+ + + +I I L
Sbjct: 357 AFDSINESIQGTTKVGTFSEFKEIQANYLPLNSVTSSEKINIEAEKQNVVKQLKDEEHKL 416
Query: 577 FIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVGLAMDEVIPLGRRGIY 398
I+K KI+K++++LTKL W SEQ+VD+E LT EERQ+F+K+GL MDE + LGRRGIY
Sbjct: 417 SILKLKIDKAEQELTKLNSLWSPSEQSVDRELLTVEERQSFQKIGLKMDEFLLLGRRGIY 476
Query: 397 DGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILVAVEKLRTSHAIIIYR 218
DG IESIHQHWKHREV KV T Q L+Q+ YTA+LLEIESGG+LVAVEKLR HAIIIYR
Sbjct: 477 DGTIESIHQHWKHREVVKVITMQKALQQVNYTAKLLEIESGGLLVAVEKLRRGHAIIIYR 536
Query: 217 GKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLIWRLKRRLRDLERQIE 41
GKNY+R KRE+ QRSIE+QRRGS+KYFAR++E+ I LK+RLR LE + +
Sbjct: 537 GKNYSRMPKISPENLLTKRESYQRSIEIQRRGSMKYFARKKEQKILELKQRLRYLEGKAK 596
Query: 40 E 38
E
Sbjct: 597 E 597
Score = 86.3 bits (212), Expect = 6e-14
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -1
Query: 1778 PWVAAEETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEEVVKE 1599
PW EE +VFRREK+ R T AE L + L RLR +A+G++KWV+AKKAGVT+EVV
Sbjct: 36 PWARVEERMVFRREKRERVATRAEMELPREELERLRVEARGLRKWVKAKKAGVTQEVVDG 95
Query: 1598 IRRGWRKNELV 1566
I +GWRK ELV
Sbjct: 96 ILKGWRKEELV 106
>ref|XP_004973284.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Setaria italica]
gb|KQL01540.1| hypothetical protein SETIT_013311mg [Setaria italica]
Length = 748
Score = 502 bits (1293), Expect = e-167
Identities = 269/503 (53%), Positives = 344/503 (68%), Gaps = 7/503 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTI----ISVNSDG--LINGPI 1358
V+W+ D+ VYRG Y + S +V + V + I ++G L +G
Sbjct: 244 VIWTKGDIHFVYRGSNYQQNMKHSQYSVASVQNVSPVKYNVHRAQIKYGNEGEVLTDGNS 303
Query: 1357 AKDRNVHCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPE 1178
D + D S + + I+G+LYERE NRLL LGPRF+DWWW PLPVDADLLPE
Sbjct: 304 KGDDVIQENDQSVCGQKDEEPIKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPE 363
Query: 1177 VVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKK 998
VPGFK P R CP G R L D+ELTYLRKLAR LPTHFALGRN++L+GLA +I+KLW+K
Sbjct: 364 FVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNSRLQGLAAAILKLWEK 423
Query: 997 SLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGR 818
SLIAKIAVKVGIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ + R
Sbjct: 424 SLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQR 483
Query: 817 EAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRI 638
EA++ ++Q+KEE+AR+K +S + + S+VG++ E++D QA+++ + N I
Sbjct: 484 EAQVHDEQVKEEEARLKAVDSLQMVGGLSSEESSVGTFREYQDFQADHV-HENTENSNII 542
Query: 637 QIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQA 458
++ L I+ +KIE S++ L KL SW SEQ+ D+E LTEEE+
Sbjct: 543 ELEAEKHRLEKELKDQEWKLSILNKKIEGSNQALAKLHSSWSPSEQSADRELLTEEEKAM 602
Query: 457 FRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIES 278
FR++G MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ YTA LLE+E+
Sbjct: 603 FRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQARQIMYTANLLEVET 662
Query: 277 GGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFARE 101
GGIL+AVEKL TSHAII+YRGKNY R KREALQRSIE+QRRGS+KYFARE
Sbjct: 663 GGILIAVEKLTTSHAIILYRGKNYRRPEKSSSSNLLTKREALQRSIEVQRRGSMKYFARE 722
Query: 100 REKLIWRLKRRLRDLERQIEETT 32
R+K I LKR+LR + RQI+ T
Sbjct: 723 RQKSILELKRKLRYVARQIKYRT 745
Score = 72.0 bits (175), Expect = 2e-09
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK RE T AE+ L L RL+ A+GM +W RAKKAGVT
Sbjct: 140 RAVPWAAARDEGLKVALRREKKAREPTRAEAELEAGELDRLQRLARGMGRWARAKKAGVT 199
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVV+++RR W + E
Sbjct: 200 DEVVEDLRREWARGE 214
>gb|ONK81731.1| uncharacterized protein A4U43_C01F32310 [Asparagus officinalis]
Length = 709
Score = 499 bits (1286), Expect = e-166
Identities = 261/421 (61%), Positives = 317/421 (75%), Gaps = 1/421 (0%)
Frame = -2
Query: 1297 SIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFKPPLRMCPTGERTKL 1118
S SLY REANRLL LGPRF+DWW+KKPLPVDADLLPEVVPGFKPP R+CP ER KL
Sbjct: 279 STNESLYVREANRLLDSLGPRFVDWWYKKPLPVDADLLPEVVPGFKPPFRLCPPEERPKL 338
Query: 1117 TDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKIAVKVGIQNTSNEQM 938
DDELTYLRK+AR LPTHFALG+N KL+GLA +IIKLW+K LIAKIA+KVGI +T+N+QM
Sbjct: 339 RDDELTYLRKIARPLPTHFALGKNTKLQGLAAAIIKLWEKCLIAKIAIKVGIPHTNNQQM 398
Query: 937 SLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISEQQLKEEDARIKYTN 758
LKRLTGGVLILRNKF+IILYRGKDFLP +A + RE E+ +QQL EE+AR K
Sbjct: 399 GQELKRLTGGVLILRNKFYIILYRGKDFLPGKVASSVHEREIELHDQQLLEEEARAKAIA 458
Query: 757 SFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXXXXXXXXXXXXXXXXL 578
+F +IN + + VG++ EF++IQANY+ + + +I I L
Sbjct: 459 AFDSINESIQGTTKVGTFSEFKEIQANYLPLNSVTSSEKINIEAEKQNVVKQLKDEEHKL 518
Query: 577 FIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVGLAMDEVIPLGRRGIY 398
I+K KI+K++++LTKL W SEQ+VD+E LT EERQ+F+K+GL MDE + LGRRGIY
Sbjct: 519 SILKLKIDKAEQELTKLNSLWSPSEQSVDRELLTVEERQSFQKIGLKMDEFLLLGRRGIY 578
Query: 397 DGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILVAVEKLRTSHAIIIYR 218
DG IESIHQHWKHREV KV T Q L+Q+ YTA+LLEIESGG+LVAVEKLR HAIIIYR
Sbjct: 579 DGTIESIHQHWKHREVVKVITMQKALQQVNYTAKLLEIESGGLLVAVEKLRRGHAIIIYR 638
Query: 217 GKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLIWRLKRRLRDLERQIE 41
GKNY+R KRE+ QRSIE+QRRGS+KYFAR++E+ I LK+RLR LE + +
Sbjct: 639 GKNYSRMPKISPENLLTKRESYQRSIEIQRRGSMKYFARKKEQKILELKQRLRYLEGKAK 698
Query: 40 E 38
E
Sbjct: 699 E 699
Score = 86.3 bits (212), Expect = 7e-14
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -1
Query: 1778 PWVAAEETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEEVVKE 1599
PW EE +VFRREK+ R T AE L + L RLR +A+G++KWV+AKKAGVT+EVV
Sbjct: 138 PWARVEERMVFRREKRERVATRAEMELPREELERLRVEARGLRKWVKAKKAGVTQEVVDG 197
Query: 1598 IRRGWRKNELV 1566
I +GWRK ELV
Sbjct: 198 ILKGWRKEELV 208
>gb|ONM04948.1| chloroplast RNA splicing1 [Zea mays]
Length = 518
Score = 492 bits (1267), Expect = e-166
Identities = 264/506 (52%), Positives = 341/506 (67%), Gaps = 10/506 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPM-------FLNKSHDAVDTNNEVLGDNSTIISVNSDG--LIN 1367
VVW+ D+ VYRG KY FL H + V ++T++ S G LIN
Sbjct: 16 VVWTKGDMHFVYRGSKYQQNAKHSHTFLTNVHKGYLVKHNV---HTTLLKYGSIGPVLIN 72
Query: 1366 GPIAKDRNVHCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADL 1187
D D S + + ++G+LYERE NRLL LGPRF+DWWW PLPVDADL
Sbjct: 73 NYGEADDAFQENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADL 132
Query: 1186 LPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKL 1007
LPE VPGFK P R+CP G R L D+ELTYLRKLAR LPTHFALGRN +L+GLA +I+KL
Sbjct: 133 LPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKL 192
Query: 1006 WKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELI 827
W+KSLIAKIAVK+GIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ +
Sbjct: 193 WEKSLIAKIAVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTV 252
Query: 826 EGREAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNR 647
REA++ ++Q+KEE+AR+K +S + + S++G++ E++ A ++ + ++
Sbjct: 253 IQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE-SSLGTFREYQGFHAKFVHENTENSN 311
Query: 646 CRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEE 467
I++ L ++ +KIE+S++ L KL SW SEQ+ D+E LTEEE
Sbjct: 312 TMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEE 371
Query: 466 RQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLE 287
+ FR++G MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ Y A LLE
Sbjct: 372 KIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLE 431
Query: 286 IESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYF 110
+E+GGIL+AVEKL TSHAII+YRGKNY R KREAL+RSIE+QRRGS+KYF
Sbjct: 432 VETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYF 491
Query: 109 AREREKLIWRLKRRLRDLERQIEETT 32
RER+K I LKR+LR + RQI T
Sbjct: 492 VRERQKSILELKRKLRYVTRQIRYRT 517
>gb|PAN34705.1| hypothetical protein PAHAL_F03029 [Panicum hallii]
Length = 745
Score = 498 bits (1283), Expect = e-165
Identities = 262/504 (51%), Positives = 344/504 (68%), Gaps = 8/504 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAV-DTNNEVLGDNSTIISVNSDGLINGPIAKDRN 1343
VVW+ D+ VYRG Y +SH ++ D N +T + ++G + + N
Sbjct: 243 VVWTKGDIHFVYRGSNYQQNTKQSHYSMSDVQNLKYNVPTTQLEYGNEG----EVLTNAN 298
Query: 1342 VHCTDLSNVHFET------QNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLP 1181
D +++ + ++G+LYERE NRLL LGPRF+DWWW PLPVDADLLP
Sbjct: 299 SKADDAFQEKYQSICGQKDEEPVKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLP 358
Query: 1180 EVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWK 1001
E VPGFK P R CP G R L D ELTYLRKLAR LPTHFALGRN +L+GLA +I+KLW+
Sbjct: 359 EFVPGFKTPFRQCPPGVRPTLADVELTYLRKLARPLPTHFALGRNTRLQGLAAAILKLWE 418
Query: 1000 KSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEG 821
KSLIAKIA+KVGIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ +
Sbjct: 419 KSLIAKIALKVGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQ 478
Query: 820 REAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCR 641
REA++ ++Q+KEE+AR+K +S + + S+VG++ E++D QA+++ + ++
Sbjct: 479 REAQVHDEQVKEEEARLKAVDSLQMVGGLSSEESSVGTFREYQDFQADHVHGNTENSNTI 538
Query: 640 IQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQ 461
I++ L I+ +KIE+S++ L KL SW SE++ D+E LTEEE+
Sbjct: 539 IELEAEKHRLEKELKDQEWKLSILNKKIERSNQALAKLHSSWSPSEESADKELLTEEEKA 598
Query: 460 AFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIE 281
FR++G MD ++ LGRRGI+ G+IE IHQHWKH+EV KV TKQ RQ+ YTA LLE+E
Sbjct: 599 MFRRIGRKMDGLVLLGRRGIFGGVIEEIHQHWKHKEVVKVITKQNQARQIIYTANLLEVE 658
Query: 280 SGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAR 104
+GGIL+AVEKL TSH+II+YRGKNY R KREAL+RSIE+QRRGS+KYFAR
Sbjct: 659 TGGILIAVEKLPTSHSIILYRGKNYRRPEKSSSSNLLTKREALRRSIEVQRRGSMKYFAR 718
Query: 103 EREKLIWRLKRRLRDLERQIEETT 32
ER+K I LKRRLR + RQI+ T
Sbjct: 719 ERQKSILELKRRLRYVARQIKYRT 742
Score = 74.7 bits (182), Expect = 3e-10
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK RE T AE+ LA L RLR A+GM +W RAKKAGVT
Sbjct: 139 RAVPWAAAGDEGLKVALRREKKAREPTRAETELAAGELDRLRWVARGMGRWARAKKAGVT 198
Query: 1616 EEVVKEIRRGWRKNE 1572
+EV++++RR W K E
Sbjct: 199 DEVLEDLRREWAKGE 213
>ref|XP_002444215.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Sorghum bicolor]
gb|EES13710.1| hypothetical protein SORBI_3007G107700 [Sorghum bicolor]
Length = 728
Score = 497 bits (1279), Expect = e-165
Identities = 260/498 (52%), Positives = 339/498 (68%), Gaps = 2/498 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGPIAKDRNV 1340
VVW+ D+ VY+G KY SH V ++ +++ N G + ++
Sbjct: 241 VVWTKGDIHFVYKGSKYQQNAKHSHTFVTNVHK-----GSLVKQNVRGEADDAFQENDQS 295
Query: 1339 HCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFK 1160
C + + ++G+LYERE NRLL LGPRF+DWWW PLPVDADLLPE +PGFK
Sbjct: 296 ICGQ------KDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFIPGFK 349
Query: 1159 PPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKI 980
P R CP G R L D+ELTYLRKLAR LPTHFALGRN +L+GLA +I+KLW+KSLIAKI
Sbjct: 350 TPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAILKLWEKSLIAKI 409
Query: 979 AVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISE 800
AVKVGIQNT+NEQM+ LK LTGG +ILRNK F+ILYRGKDFLP G+A+ + REA++ +
Sbjct: 410 AVKVGIQNTNNEQMAWNLKHLTGGTVILRNKDFVILYRGKDFLPGGVAQTVIQREAQVDD 469
Query: 799 QQLKEEDARIKYTNSFYTINAI-MPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXX 623
+Q+KEE+AR+K +S + + S+VG++ E++D A+++ + + I++
Sbjct: 470 EQVKEEEARLKAVDSLQMVGELSSDEESSVGTFREYKDFHADFVHANTEKSNTMIELEAE 529
Query: 622 XXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVG 443
L I+ +KIE+S++ L KLR SW SEQ+ D+E LTEEE+ FR++G
Sbjct: 530 KYRLEKELKDHEWKLSILNKKIERSNQALAKLRSSWSPSEQSADRELLTEEEKIMFRRIG 589
Query: 442 LAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILV 263
MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ YTA LLE+E+GGIL+
Sbjct: 590 RKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQARQIMYTANLLEVETGGILI 649
Query: 262 AVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLI 86
AVEKL TSHAII+YRGKNY R KREAL+RS+E+QRRGS+KYF RER+K I
Sbjct: 650 AVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSLEVQRRGSMKYFVRERQKSI 709
Query: 85 WRLKRRLRDLERQIEETT 32
LKRRLR + RQI T
Sbjct: 710 SELKRRLRYVTRQIRYRT 727
Score = 73.9 bits (180), Expect = 6e-10
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK R+ T AE+ L D L RLR A+GM +W RAKKAGVT
Sbjct: 137 RAVPWAAARDEGLKVALRREKKPRKPTRAETELETDELDRLRRLARGMGRWARAKKAGVT 196
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVV+E+RR W E
Sbjct: 197 DEVVEEMRREWASGE 211
>ref|XP_020705251.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Dendrobium catenatum]
gb|PKU66813.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Dendrobium catenatum]
Length = 763
Score = 494 bits (1271), Expect = e-163
Identities = 268/501 (53%), Positives = 347/501 (69%), Gaps = 10/501 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDA-----VDTNNEVLGDNSTIISVNSDGLINGPIA 1355
VVW +D+IV YRG+ Y M V+ ++ NS++ + +G+ NG I
Sbjct: 249 VVWRKKDVIVAYRGDNYQMGTKAFPSPTPPPYVEPSSSKF--NSSLSPITFNGITNGAII 306
Query: 1354 K-DRNVHCTDLSNVHFETQNS---IEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADL 1187
++ V + ++ E+Q + SLYEREANRLL GLGPRFIDWW +KPLPVDADL
Sbjct: 307 SVNKQVVNSFSKDMELESQRDHGLVNFSLYEREANRLLDGLGPRFIDWWRRKPLPVDADL 366
Query: 1186 LPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKL 1007
LPE+VPGF P R CP E +L++D+LTYLRKLAR LPTHFAL +N KL+GLA +I+KL
Sbjct: 367 LPEIVPGFMTPFRRCPPYEGKRLSNDDLTYLRKLARPLPTHFALSKNTKLQGLACAIMKL 426
Query: 1006 WKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELI 827
W+KSLIAKIA+KVGIQNT++EQM+ LKRLTGGVLILRNKF IIL+RGKDFLP +A +
Sbjct: 427 WEKSLIAKIAIKVGIQNTNSEQMAWELKRLTGGVLILRNKFLIILFRGKDFLPSRVAGSV 486
Query: 826 EGREAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNR 647
REA + QQL EE AR K SF+ + S++G+Y EF+DI+ NYI ++ +
Sbjct: 487 LEREAHVEVQQLLEEKARSKAAESFHVTIMLETATSSLGTYREFQDIRTNYIPRNNVVCK 546
Query: 646 CRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEE 467
+ I LFI+K KI KS+K L KL SW SE + D+E LTEEE
Sbjct: 547 GELGIAAEMENLKKTLQEQKRSLFILKAKIGKSEKVLAKLNSSWSPSELSADRELLTEEE 606
Query: 466 RQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLE 287
R++ RK+G+ MD+++ LGRRG++DG+I SIHQHWKHREV KV T Q ++Q+++TARLLE
Sbjct: 607 RESLRKIGMKMDKILLLGRRGVFDGVIGSIHQHWKHREVVKVITLQKAVQQISHTARLLE 666
Query: 286 IESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYF 110
IESGGI+VAVEK HAIIIYRG+NY R KREA QRSIE+QRRGSL++F
Sbjct: 667 IESGGIVVAVEKQGRGHAIIIYRGRNYRRPLNLSPEHLLTKREAFQRSIELQRRGSLRFF 726
Query: 109 AREREKLIWRLKRRLRDLERQ 47
A+ERE+ IW L+R+LR+LE++
Sbjct: 727 AKEREQYIWELERKLRELEQK 747
Score = 81.6 bits (200), Expect = 2e-12
Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -1
Query: 1787 KRAPWVAAEET-LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEE 1611
++APW AAEE LV R KK R AE+VL L RLRG+A M+KWVR KKAGVT E
Sbjct: 148 RKAPWAAAEEEMLVIPRLKKKRFFPKAETVLPGAELERLRGEAMKMRKWVRGKKAGVTPE 207
Query: 1610 VVKEIRRGWRKNEL 1569
V+K IRR WRK+EL
Sbjct: 208 VMKGIRRAWRKSEL 221
>ref|XP_008648227.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Zea mays]
Length = 744
Score = 492 bits (1267), Expect = e-163
Identities = 264/506 (52%), Positives = 341/506 (67%), Gaps = 10/506 (1%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPM-------FLNKSHDAVDTNNEVLGDNSTIISVNSDG--LIN 1367
VVW+ D+ VYRG KY FL H + V ++T++ S G LIN
Sbjct: 242 VVWTKGDMHFVYRGSKYQQNAKHSHTFLTNVHKGYLVKHNV---HTTLLKYGSIGPVLIN 298
Query: 1366 GPIAKDRNVHCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADL 1187
D D S + + ++G+LYERE NRLL LGPRF+DWWW PLPVDADL
Sbjct: 299 NYGEADDAFQENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADL 358
Query: 1186 LPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKL 1007
LPE VPGFK P R+CP G R L D+ELTYLRKLAR LPTHFALGRN +L+GLA +I+KL
Sbjct: 359 LPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKL 418
Query: 1006 WKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELI 827
W+KSLIAKIAVK+GIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ +
Sbjct: 419 WEKSLIAKIAVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTV 478
Query: 826 EGREAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNR 647
REA++ ++Q+KEE+AR+K +S + + S++G++ E++ A ++ + ++
Sbjct: 479 IQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE-SSLGTFREYQGFHAKFVHENTENSN 537
Query: 646 CRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEE 467
I++ L ++ +KIE+S++ L KL SW SEQ+ D+E LTEEE
Sbjct: 538 TMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEE 597
Query: 466 RQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLE 287
+ FR++G MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ Y A LLE
Sbjct: 598 KIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLE 657
Query: 286 IESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYF 110
+E+GGIL+AVEKL TSHAII+YRGKNY R KREAL+RSIE+QRRGS+KYF
Sbjct: 658 VETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYF 717
Query: 109 AREREKLIWRLKRRLRDLERQIEETT 32
RER+K I LKR+LR + RQI T
Sbjct: 718 VRERQKSILELKRKLRYVTRQIRYRT 743
Score = 75.5 bits (184), Expect = 2e-10
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK RE T AE+ L L+RLR A+G+ +W RAKKAGVT
Sbjct: 138 RAVPWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVT 197
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVVKE+RR W E
Sbjct: 198 DEVVKEVRREWASGE 212
>gb|ONM04944.1| chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 486 bits (1252), Expect = e-161
Identities = 259/497 (52%), Positives = 333/497 (67%), Gaps = 1/497 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGPIAKDRNV 1340
VVW+ D+ VYRG KY SH + TN + KD
Sbjct: 242 VVWTKGDMHFVYRGSKYQQNAKHSHTFL-TN----------------------VHKDDAF 278
Query: 1339 HCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFK 1160
D S + + ++G+LYERE NRLL LGPRF+DWWW PLPVDADLLPE VPGFK
Sbjct: 279 QENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFK 338
Query: 1159 PPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKI 980
P R+CP G R L D+ELTYLRKLAR LPTHFALGRN +L+GLA +I+KLW+KSLIAKI
Sbjct: 339 TPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKI 398
Query: 979 AVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISE 800
AVK+GIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ + REA++ +
Sbjct: 399 AVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHD 458
Query: 799 QQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXXX 620
+Q+KEE+AR+K +S + + S++G++ E++ A ++ + ++ I++
Sbjct: 459 EQVKEEEARLKAVDSLQMVGELSEE-SSLGTFREYQGFHAKFVHENTENSNTMIELEAEK 517
Query: 619 XXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVGL 440
L ++ +KIE+S++ L KL SW SEQ+ D+E LTEEE+ FR++G
Sbjct: 518 YRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGR 577
Query: 439 AMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILVA 260
MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ Y A LLE+E+GGIL+A
Sbjct: 578 KMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIA 637
Query: 259 VEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLIW 83
VEKL TSHAII+YRGKNY R KREAL+RSIE+QRRGS+KYF RER+K I
Sbjct: 638 VEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYFVRERQKSIL 697
Query: 82 RLKRRLRDLERQIEETT 32
LKR+LR + RQI T
Sbjct: 698 ELKRKLRYVTRQIRYRT 714
Score = 75.5 bits (184), Expect = 2e-10
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK RE T AE+ L L+RLR A+G+ +W RAKKAGVT
Sbjct: 138 RAVPWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVT 197
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVVKE+RR W E
Sbjct: 198 DEVVKEVRREWASGE 212
>ref|XP_008648226.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Zea mays]
Length = 757
Score = 485 bits (1249), Expect = e-160
Identities = 259/495 (52%), Positives = 335/495 (67%), Gaps = 10/495 (2%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPM-------FLNKSHDAVDTNNEVLGDNSTIISVNSDG--LIN 1367
VVW+ D+ VYRG KY FL H + V ++T++ S G LIN
Sbjct: 242 VVWTKGDMHFVYRGSKYQQNAKHSHTFLTNVHKGYLVKHNV---HTTLLKYGSIGPVLIN 298
Query: 1366 GPIAKDRNVHCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADL 1187
D D S + + ++G+LYERE NRLL LGPRF+DWWW PLPVDADL
Sbjct: 299 NYGEADDAFQENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADL 358
Query: 1186 LPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKL 1007
LPE VPGFK P R+CP G R L D+ELTYLRKLAR LPTHFALGRN +L+GLA +I+KL
Sbjct: 359 LPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKL 418
Query: 1006 WKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELI 827
W+KSLIAKIAVK+GIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ +
Sbjct: 419 WEKSLIAKIAVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTV 478
Query: 826 EGREAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNR 647
REA++ ++Q+KEE+AR+K +S + + S++G++ E++ A ++ + ++
Sbjct: 479 IQREAQVHDEQVKEEEARLKAVDSLQMVGELSEE-SSLGTFREYQGFHAKFVHENTENSN 537
Query: 646 CRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEE 467
I++ L ++ +KIE+S++ L KL SW SEQ+ D+E LTEEE
Sbjct: 538 TMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEE 597
Query: 466 RQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLE 287
+ FR++G MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ Y A LLE
Sbjct: 598 KIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLE 657
Query: 286 IESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYF 110
+E+GGIL+AVEKL TSHAII+YRGKNY R KREAL+RSIE+QRRGS+KYF
Sbjct: 658 VETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYF 717
Query: 109 AREREKLIWRLKRRL 65
RER+K I LKR+L
Sbjct: 718 VRERQKSILELKRKL 732
Score = 75.5 bits (184), Expect = 2e-10
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK RE T AE+ L L+RLR A+G+ +W RAKKAGVT
Sbjct: 138 RAVPWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVT 197
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVVKE+RR W E
Sbjct: 198 DEVVKEVRREWASGE 212
>ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 483 bits (1244), Expect = e-160
Identities = 258/497 (51%), Positives = 332/497 (66%), Gaps = 1/497 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGPIAKDRNV 1340
VVW+ D+ VYRG KY SH + TN + KD
Sbjct: 242 VVWTKGDMHFVYRGSKYQQNAKHSHTFL-TN----------------------VHKDDAF 278
Query: 1339 HCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFK 1160
D S + + ++G+LYERE NRLL LGPRF+DWWW PLPVDADLLPE VPG K
Sbjct: 279 QENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSK 338
Query: 1159 PPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKI 980
P R+CP G R L D+ELTYLRKLAR LPTHFALGRN +L+GLA +I+KLW+KSLIAKI
Sbjct: 339 TPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKI 398
Query: 979 AVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISE 800
AVK+GIQNT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+A+ + REA++ +
Sbjct: 399 AVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHD 458
Query: 799 QQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXXX 620
+Q+KEE+AR+K +S + + S++G++ E++ A ++ + ++ I++
Sbjct: 459 EQVKEEEARLKAVDSLQMVGELSEE-SSLGTFREYQGFHAKFVHENTENSNTMIELEAEK 517
Query: 619 XXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVGL 440
L ++ +KIE+S++ L KL SW SEQ+ D+E LTEEE+ FR++G
Sbjct: 518 YRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGR 577
Query: 439 AMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILVA 260
MD ++ LGRRGI+DG+IE IHQHWKH+EV KV TKQ RQ+ Y A LLE+E+GGIL+A
Sbjct: 578 KMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIA 637
Query: 259 VEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLIW 83
VEKL TSHAII+YRGKNY R KREAL+RSIE+QRRGS+KYF RER+K I
Sbjct: 638 VEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYFVRERQKSIL 697
Query: 82 RLKRRLRDLERQIEETT 32
LKR+LR + RQI T
Sbjct: 698 ELKRKLRYVTRQIRYRT 714
Score = 73.9 bits (180), Expect = 6e-10
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + + RREKK RE T AE+ L L RLR A+G+ +W RAKKAGVT
Sbjct: 138 RAVPWAAARDEGLKVALRREKKPREPTRAETELETHELRRLRRLARGIGRWARAKKAGVT 197
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVVKE+RR W E
Sbjct: 198 DEVVKEVRREWASGE 212
>ref|XP_020094505.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Ananas comosus]
Length = 661
Score = 481 bits (1239), Expect = e-160
Identities = 269/506 (53%), Positives = 338/506 (66%), Gaps = 11/506 (2%)
Frame = -2
Query: 1516 VWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLI--NGPIAK--- 1352
VW R+L V E ++++ + V+ L ++ D L+ GP K
Sbjct: 153 VWRTRELAAVRIVEPLRRNMDRAREIVEAKTGGL-----VVCTKRDILVAYKGPGEKLLD 207
Query: 1351 ---DRNVHCTDLSNVHFETQNSIE--GSLYEREANRLLSGLGPRFIDWWWKKPLPVDADL 1187
D N N + + ++E G+LYERE NRLL GLGPRFIDWWWKKPLPVDADL
Sbjct: 208 DIRDSNCMSPTNYNRNESKKENLEPRGTLYERETNRLLDGLGPRFIDWWWKKPLPVDADL 267
Query: 1186 LPEVVPGFKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKL 1007
LPEVVP F+ R CP G R +L D+ELTYLR LAR LPTHFALG+N LEGLA +I+KL
Sbjct: 268 LPEVVPDFRTLFRQCPPGVRPQLRDNELTYLRMLARPLPTHFALGKNKGLEGLAAAILKL 327
Query: 1006 WKKSLIAKIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELI 827
W+KSL+AKIAVKVGI +T+NE M+ LKRLTGGVLILRNKFFIILYRGKDFLP +A+ I
Sbjct: 328 WEKSLVAKIAVKVGIPDTNNELMACELKRLTGGVLILRNKFFIILYRGKDFLPGRVADSI 387
Query: 826 EGREAEISEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNR 647
RE + +QQL EE+AR K +F ++ ++ ++G++ E+++IQ N+I
Sbjct: 388 IERETVLYDQQLAEEEARSKAAATFQLVDGLLSNPCSIGTFREYQEIQVNHIDRKTELCE 447
Query: 646 CRIQIXXXXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEE 467
++++ LF + +KIEKS+K L L S S+Q DQE LTEEE
Sbjct: 448 AKLKLEAEKVRLEKEIKEQERQLFNLTRKIEKSEKVLANLNSSRSSSDQTSDQELLTEEE 507
Query: 466 RQAFRKVGLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLE 287
RQ FR +GL MDE + LGRRGIYDG+I +IHQHWKHREV KV T Q ++Q+ YTA LE
Sbjct: 508 RQTFRTIGLKMDEHLLLGRRGIYDGVIGNIHQHWKHREVVKVITMQKGIQQIRYTASQLE 567
Query: 286 IESGGILVAVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYF 110
IESGG L+AVEKLR+S+AIIIYRGKNY R K+EAL+RSIE+QRRGSLK+F
Sbjct: 568 IESGGTLIAVEKLRSSNAIIIYRGKNYRRPLKLLPDNLLTKKEALERSIEVQRRGSLKFF 627
Query: 109 AREREKLIWRLKRRLRDLERQIEETT 32
AR+RE+ IW LKRRLRDLE +I E T
Sbjct: 628 ARQREESIWDLKRRLRDLEEEIREIT 653
Score = 70.9 bits (172), Expect = 5e-09
Identities = 44/73 (60%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 1778 PWVAA-EETLVFRREKKVREI-TAAESVLAPDLLYRLRGQAKGM-KKWVRAKKAGVTEEV 1608
PW A EETLVF REKK R TAAE L L RLR A+G ++WVRAKKAG+T EV
Sbjct: 87 PWAGAGEETLVFGREKKARAPPTAAERRLPAAELARLRSAARGTERRWVRAKKAGLTPEV 146
Query: 1607 VKEIRRGWRKNEL 1569
V+EI R WR EL
Sbjct: 147 VEEIARVWRTREL 159
>gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 476 bits (1225), Expect = e-160
Identities = 255/495 (51%), Positives = 330/495 (66%), Gaps = 1/495 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGPIAKDRNV 1340
VVW+ + VYRG Y + D V+ N E+ S + S N G
Sbjct: 16 VVWTRGGIHFVYRGSSYLENAKQHRDFVNYNEEL----SPVTSNNPTS--QGKYWSKDET 69
Query: 1339 HCTDLSNVHFETQNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGFK 1160
D + I+G+LYERE NRLL LGPRFIDWWW PLPVDADLLPEVVP FK
Sbjct: 70 LTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFK 129
Query: 1159 PPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAKI 980
P R CP G R L D+ELTYLRK AR LPTHF LGRN KL+GLA +I+KLW+KSLIAK+
Sbjct: 130 TPFRQCPPGVRPTLADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKV 189
Query: 979 AVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEISE 800
AVKVGIQN+++EQM+ LKRLTGG +ILRNK +II+YRGKDFLP G+AE + +E+++ +
Sbjct: 190 AVKVGIQNSNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIEQESQVHD 249
Query: 799 QQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXXX 620
QQ KEE+AR+K +S I + S VG++ E++D ++ A N RIQ+
Sbjct: 250 QQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSH-ARRTTENNFRIQLEAKK 308
Query: 619 XXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVGL 440
L ++ +KIE+S++ L KL SW S+++ D+E LTEEER+ FRK+GL
Sbjct: 309 HRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGL 368
Query: 439 AMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILVA 260
MDE + LGRRG+++G+IE IHQHWKH+EV KV TKQ Q+TYT+ +LE+E+GG L+A
Sbjct: 369 KMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQITYTSMMLEVETGGTLIA 428
Query: 259 VEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLIW 83
+E+ TSHAII+YRGKNY R KREALQRSIE+QRRGS+KYFA+ER+K I
Sbjct: 429 IERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSMKYFAQERKKSID 488
Query: 82 RLKRRLRDLERQIEE 38
LKR LR++ +I +
Sbjct: 489 ELKRELRNVTWEIRK 503
>ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Brachypodium distachyon]
gb|KQJ96249.1| hypothetical protein BRADI_3g21852v3 [Brachypodium distachyon]
Length = 730
Score = 483 bits (1244), Expect = e-159
Identities = 258/498 (51%), Positives = 332/498 (66%), Gaps = 2/498 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIIS-VNSDGLINGPIAKDRN 1343
VVW+ D+ VYRG Y + SH+ V +V S V G NG K +
Sbjct: 235 VVWTKGDIHFVYRGSDYVHNMKYSHNFVADIQKVRTPQEKYKSNVELLGKHNG---KAKG 291
Query: 1342 VHCTDLSNVHFET-QNSIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPG 1166
S++ +T + ++G+LYERE NRLL LGPRFIDWWW PLPVDADLLPEVV G
Sbjct: 292 AFREKDSSIDIQTYEEPVKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVLG 351
Query: 1165 FKPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIA 986
FK P R CP G R L D+ELTYLRKLAR LP HFALGRN KL+GLA +I+KLW+KSL+A
Sbjct: 352 FKTPFRQCPPGVRPTLADEELTYLRKLARPLPAHFALGRNTKLQGLAAAILKLWEKSLVA 411
Query: 985 KIAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEI 806
KIAVKVGI+NT+NEQM+ LK LTGG +ILRNK FIILYRGKDFLP G+ + + EA++
Sbjct: 412 KIAVKVGIENTNNEQMAWNLKHLTGGTIILRNKDFIILYRGKDFLPAGVKQSVIQHEAQV 471
Query: 805 SEQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXX 626
QQ+KEE+AR+ T S + S+ G++ E++D Q N +N+ I++
Sbjct: 472 DAQQVKEEEARLSGTESLQMFAGLPSVESSAGTFREYQDFQVNQAHETTINNKAMIELEA 531
Query: 625 XXXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKV 446
LFI+ +KIE+S++ L KL SW SEQ+ D+E LTEEER FRK+
Sbjct: 532 EKHRLEKELKDQERRLFILTKKIERSNQALAKLHSSWNPSEQSADKELLTEEERMIFRKI 591
Query: 445 GLAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGIL 266
GL MDE + LGRRG++DG+IE IHQHWKH+E+ KV TKQ Q+TYT+ LLE+E+GG+L
Sbjct: 592 GLKMDEHVLLGRRGVFDGVIEEIHQHWKHKEIVKVITKQNQSYQITYTSMLLEVETGGVL 651
Query: 265 VAVEKLRTSHAIIIYRGKNYARXXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLI 86
+A +KL SHAII+YRGKNY R KREAL+RS+E+QRRGS+KY+ ER+K I
Sbjct: 652 IATQKLPHSHAIILYRGKNYRRPEKSPSNLLTKREALRRSVEVQRRGSMKYYVWERQKSI 711
Query: 85 WRLKRRLRDLERQIEETT 32
L+ RL ++ R+I + T
Sbjct: 712 EELQWRLANVAREIRKLT 729
Score = 78.2 bits (191), Expect = 3e-11
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = -1
Query: 1787 KRAPWVAAEET---LVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVT 1617
+ PW AA + +V RREKKVRE T AE L P LL RLR A+GM +W RAKKAGVT
Sbjct: 131 RAVPWSAARDEHLKVVLRREKKVREPTRAERELGPALLERLRRAARGMDRWARAKKAGVT 190
Query: 1616 EEVVKEIRRGWRKNE 1572
+EVV+++R W +
Sbjct: 191 DEVVEDVRSEWSSGQ 205
>ref|XP_020571490.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Phalaenopsis equestris]
Length = 685
Score = 481 bits (1239), Expect = e-159
Identities = 261/493 (52%), Positives = 339/493 (68%), Gaps = 2/493 (0%)
Frame = -2
Query: 1519 VVWSMRDLIVVYRGEKYPMFLNKSHDAVDTNNEVLGDNSTIISVNSDGLINGPIAKDRNV 1340
VVW +D+IV+Y+GE Y + A+ T N +
Sbjct: 222 VVWRKKDVIVLYKGEDY----QRCTKALPTLNPYV------------------------- 252
Query: 1339 HCTDLSNVHFETQN-SIEGSLYEREANRLLSGLGPRFIDWWWKKPLPVDADLLPEVVPGF 1163
+LS+ F++ N SI+ SLYERE+NRLL GLGPRFIDWW KPLPVDADLLPE+V GF
Sbjct: 253 ---ELSSSKFDSSNGSIDASLYERESNRLLDGLGPRFIDWWRPKPLPVDADLLPEIVRGF 309
Query: 1162 KPPLRMCPTGERTKLTDDELTYLRKLARSLPTHFALGRNNKLEGLATSIIKLWKKSLIAK 983
K P R+CP E +L+DD+LTYLRKLAR LPTHFAL +N KL+GLA +I+KLW++SLIAK
Sbjct: 310 KTPFRLCPPYEWKRLSDDDLTYLRKLARPLPTHFALSKNTKLQGLACAIMKLWERSLIAK 369
Query: 982 IAVKVGIQNTSNEQMSLVLKRLTGGVLILRNKFFIILYRGKDFLPDGMAELIEGREAEIS 803
IA+KVGIQNT+++QM+ LKRLTGGVLILRNKF+IILYRGKDFLP +A+ + REA +
Sbjct: 370 IAIKVGIQNTNSQQMAWELKRLTGGVLILRNKFYIILYRGKDFLPTSVADSVLEREAHVQ 429
Query: 802 EQQLKEEDARIKYTNSFYTINAIMPRYSTVGSYMEFRDIQANYIATHDPHNRCRIQIXXX 623
Q L EE A K F+ + + S++G+Y EF+ I+ANY + ++ + ++I
Sbjct: 430 AQHLSEEKACSKAAELFHESIRLERKTSSLGTYREFQHIRANYSSVNNVVCKGELKIAAE 489
Query: 622 XXXXXXXXXXXXXXLFIMKQKIEKSDKQLTKLRFSWCFSEQNVDQETLTEEERQAFRKVG 443
LFI+K K+ KS+K L KL SW SE + D+E LTEEER++ RK+G
Sbjct: 490 IENLKKTLREHERGLFILKVKLGKSEKVLRKLSSSWSPSELSADRELLTEEERESLRKIG 549
Query: 442 LAMDEVIPLGRRGIYDGLIESIHQHWKHREVAKVTTKQTLLRQMTYTARLLEIESGGILV 263
+ MD+++ LGRRGIYDG+I SIHQHWKHREV KV T Q + Q+T+TA+LLEIESGGI+V
Sbjct: 550 MKMDKILLLGRRGIYDGVIASIHQHWKHREVVKVITMQKITEQITHTAKLLEIESGGIVV 609
Query: 262 AVEKLRTSHAIIIYRGKNYAR-XXXXXXXXXXKREALQRSIEMQRRGSLKYFAREREKLI 86
A+EK HAII+YRG+NY R KREALQRS+E+QRRGSLK+FA+ERE+ I
Sbjct: 610 ALEKQGIRHAIILYRGRNYRRPLELKPEHLLTKREALQRSVELQRRGSLKFFAKEREQYI 669
Query: 85 WRLKRRLRDLERQ 47
LKR+LR+LE++
Sbjct: 670 QELKRKLRELEQR 682
Score = 77.0 bits (188), Expect = 6e-11
Identities = 43/74 (58%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 1787 KRAPWVAA-EETLVFRREKKVREITAAESVLAPDLLYRLRGQAKGMKKWVRAKKAGVTEE 1611
++ PW EE L RR +K R AAE VL L RLRG+A M+KWVR KKAGVT E
Sbjct: 121 RKYPWATGNEERLAIRRLRKKRIQPAAEMVLPAVELERLRGEAMKMRKWVRGKKAGVTPE 180
Query: 1610 VVKEIRRGWRKNEL 1569
VVK IRR WRK EL
Sbjct: 181 VVKGIRRAWRKKEL 194