BLASTX nr result
ID: Cheilocostus21_contig00013887
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00013887
(946 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009402203.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 88 7e-16
ref|XP_009389435.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 87 1e-15
ref|XP_018678102.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 80 3e-13
ref|XP_018678101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 80 3e-13
ref|XP_009412320.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 68 5e-09
gb|OMO77072.1| Zinc finger, RING-type [Corchorus olitorius] 62 4e-07
ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 60 1e-06
ref|XP_020238387.1| E3 ubiquitin-protein ligase RHF2A [Cajanus c... 60 2e-06
gb|KYP43608.1| E3 ubiquitin-protein ligase At3g02290 family [Caj... 60 2e-06
ref|XP_007149999.1| hypothetical protein PHAVU_005G117400g [Phas... 59 5e-06
gb|EOY33234.1| RING-H2 group F2A isoform 2 [Theobroma cacao] 59 6e-06
ref|XP_021277918.1| E3 ubiquitin-protein ligase RHF2A [Herrania ... 59 6e-06
ref|XP_017982934.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 59 6e-06
gb|EOY33233.1| RING-H2 group F2A isoform 1 [Theobroma cacao] 59 6e-06
ref|XP_017982933.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 59 6e-06
>ref|XP_009402203.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
subsp. malaccensis]
ref|XP_009402211.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
subsp. malaccensis]
ref|XP_009402218.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
subsp. malaccensis]
Length = 376
Score = 87.8 bits (216), Expect = 7e-16
Identities = 54/120 (45%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QYLVPATN 179
GDFELQHLPV GSDAELEERIIQ QYLV +TN
Sbjct: 111 GDFELQHLPVGGSDAELEERIIQHLAAAAAMGRAHHLARREAQGRSGSHGHPQYLVFSTN 170
Query: 180 SDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVALLTS 359
S+ PS GS++ S TR E+E T++ N + VT P ESAE T+ H++Q++LLTS
Sbjct: 171 SNTPSVGSLSASSVTRVENESAPETVAANPLASVTTPVGESAEVTSVTPTHASQISLLTS 230
>ref|XP_009389435.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 382
Score = 87.0 bits (214), Expect = 1e-15
Identities = 54/119 (45%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QYLVPATN 179
GDFELQHLPV GSDAELEERIIQ QYLV +TN
Sbjct: 111 GDFELQHLPVGGSDAELEERIIQHLAAAAAMGRAHHIARREGRVRSGSHGRPQYLVFSTN 170
Query: 180 SDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVALLT 356
S+ PS GSV+ S GE+E I+ +SS+ +T P +E AE TN + AH++QV LT
Sbjct: 171 SNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEPAEVTNVSPAHASQVPFLT 229
>ref|XP_018678102.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Musa
acuminata subsp. malaccensis]
Length = 381
Score = 80.5 bits (197), Expect = 3e-13
Identities = 54/125 (43%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Frame = +3
Query: 3 GDFELQH------LPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QY 161
GDFELQH LPV GSDAELEERIIQ QY
Sbjct: 111 GDFELQHVGSSIMLPVGGSDAELEERIIQHLAAAAAMGRAHHIARREGRVRSGSHGRPQY 170
Query: 162 LVPATNSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
LV +TNS+ PS GSV+ S GE+E I+ +SS+ +T P +E AE TN + AH++Q
Sbjct: 171 LVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEPAEVTNVSPAHASQ 230
Query: 342 VALLT 356
V LT
Sbjct: 231 VPFLT 235
>ref|XP_018678101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 388
Score = 80.5 bits (197), Expect = 3e-13
Identities = 54/125 (43%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Frame = +3
Query: 3 GDFELQH------LPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QY 161
GDFELQH LPV GSDAELEERIIQ QY
Sbjct: 111 GDFELQHVGSSIMLPVGGSDAELEERIIQHLAAAAAMGRAHHIARREGRVRSGSHGRPQY 170
Query: 162 LVPATNSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
LV +TNS+ PS GSV+ S GE+E I+ +SS+ +T P +E AE TN + AH++Q
Sbjct: 171 LVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEPAEVTNVSPAHASQ 230
Query: 342 VALLT 356
V LT
Sbjct: 231 VPFLT 235
>ref|XP_009412320.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
subsp. malaccensis]
ref|XP_018685905.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
subsp. malaccensis]
Length = 374
Score = 67.8 bits (164), Expect = 5e-09
Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QYLVPATN 179
GDFEL HL V GS AE+EERI Q QYLV +TN
Sbjct: 111 GDFELHHLRVGGSHAEIEERIFQHLAATASMGRARHIAGREGRVRSGSHGRPQYLVFSTN 170
Query: 180 SDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVALLTS 359
SD S GS++ S RGE+E ++ N ++P E +E T+ H+++VA LTS
Sbjct: 171 SDAASVGSISSSSPPRGENEVAPAIVAANPTTPPATLVGEFSELTSVAPTHASEVATLTS 230
Query: 360 E 362
E
Sbjct: 231 E 231
>gb|OMO77072.1| Zinc finger, RING-type [Corchorus olitorius]
Length = 385
Score = 62.0 bits (149), Expect = 4e-07
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +T
Sbjct: 110 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGLRNRSSTQGRPQFLVFST 169
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVALLT 356
+ + PS ++ SPT R PA T+ SS T + SA T +AH++Q L
Sbjct: 170 HPNAPSTSPISSSPTQREGEPAPAITLGTPSSPARTAGEESSASFTPVPSAHADQQPALA 229
Query: 357 S 359
S
Sbjct: 230 S 230
>ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
ref|XP_010651629.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
emb|CBI24399.3| unnamed protein product, partial [Vitis vinifera]
Length = 393
Score = 60.5 bits (145), Expect = 1e-06
Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +
Sbjct: 116 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSSAQGRPQFLVFSA 175
Query: 177 NSDVPSDGSVAYSPTTRGESEP-PAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVALL 353
+ P G + SP RGE EP PA T ++ SS P + S TT+ ++ + ++
Sbjct: 176 HPSTPQAGPASSSPAQRGEDEPAPAITAAMPSSLPTAVGEESSRLTTSQLSSQAEEITAS 235
Query: 354 TS 359
S
Sbjct: 236 AS 237
>ref|XP_020238387.1| E3 ubiquitin-protein ligase RHF2A [Cajanus cajan]
Length = 401
Score = 60.1 bits (144), Expect = 2e-06
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--YLVPAT 176
GDFELQHLPV SDA+LEERIIQ + +LV +T
Sbjct: 125 GDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFST 184
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVA 347
+ + P + SP+ RG+ E P TI+V + SP +ES++ T + +QV+
Sbjct: 185 HPNSPPRAPASSSPSQRGDDEQPTPTIAVANMSPTPATGEESSQLTLVPSVQVDQVS 241
>gb|KYP43608.1| E3 ubiquitin-protein ligase At3g02290 family [Cajanus cajan]
Length = 460
Score = 60.1 bits (144), Expect = 2e-06
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--YLVPAT 176
GDFELQHLPV SDA+LEERIIQ + +LV +T
Sbjct: 184 GDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFST 243
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVA 347
+ + P + SP+ RG+ E P TI+V + SP +ES++ T + +QV+
Sbjct: 244 HPNSPPRAPASSSPSQRGDDEQPTPTIAVANMSPTPATGEESSQLTLVPSVQVDQVS 300
>ref|XP_007149999.1| hypothetical protein PHAVU_005G117400g [Phaseolus vulgaris]
gb|ESW21993.1| hypothetical protein PHAVU_005G117400g [Phaseolus vulgaris]
Length = 390
Score = 58.9 bits (141), Expect = 5e-06
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--YLVPAT 176
GDFELQHLPV SDA+LEERIIQ + +LV +T
Sbjct: 122 GDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFST 181
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQVALLT 356
+ + P + SP+ RG+ E P TI+V++ SP D+S++ T ++QV+ L
Sbjct: 182 HPNSPPMAPTSSSPSQRGDDE-PTPTIAVSNLSPTPATGDQSSQVTLVAPVQADQVSALG 240
Query: 357 SE 362
++
Sbjct: 241 TD 242
>gb|EOY33234.1| RING-H2 group F2A isoform 2 [Theobroma cacao]
Length = 385
Score = 58.5 bits (140), Expect = 6e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +T
Sbjct: 110 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGLRSRSSAQGRPQFLVFST 169
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
+ + PS G ++ SPT R P+ T+ SS T + SA T +A ++Q
Sbjct: 170 HPNAPSTGPISSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQ 224
>ref|XP_021277918.1| E3 ubiquitin-protein ligase RHF2A [Herrania umbratica]
Length = 388
Score = 58.5 bits (140), Expect = 6e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +T
Sbjct: 113 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGLRNRSSAQGRPQFLVFST 172
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
+ + PS G ++ SPT R P+ T+ SS T + SA T +A ++Q
Sbjct: 173 HPNAPSTGPISSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQ 227
>ref|XP_017982934.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A isoform X2 [Theobroma
cacao]
Length = 388
Score = 58.5 bits (140), Expect = 6e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +T
Sbjct: 113 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGLRSRSSAQGRPQFLVFST 172
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
+ + PS G ++ SPT R P+ T+ SS T + SA T +A ++Q
Sbjct: 173 HPNAPSTGPISSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQ 227
>gb|EOY33233.1| RING-H2 group F2A isoform 1 [Theobroma cacao]
Length = 388
Score = 58.5 bits (140), Expect = 6e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +T
Sbjct: 113 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGLRSRSSAQGRPQFLVFST 172
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
+ + PS G ++ SPT R P+ T+ SS T + SA T +A ++Q
Sbjct: 173 HPNAPSTGPISSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQ 227
>ref|XP_017982933.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A isoform X1 [Theobroma
cacao]
Length = 407
Score = 58.5 bits (140), Expect = 6e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 GDFELQHLPVVGSDAELEERIIQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXQYLVPAT 176
GDFELQHLPV +DAELEERIIQ Q+LV +T
Sbjct: 132 GDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGLRSRSSAQGRPQFLVFST 191
Query: 177 NSDVPSDGSVAYSPTTRGESEPPAGTISVNSSSPVTNPRDESAETTNDNAAHSNQ 341
+ + PS G ++ SPT R P+ T+ SS T + SA T +A ++Q
Sbjct: 192 HPNAPSTGPISSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQ 246