BLASTX nr result
ID: Cheilocostus21_contig00013886
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00013886 (840 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_018678102.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 77 3e-12 ref|XP_009389435.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 77 3e-12 ref|XP_018678101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 77 3e-12 ref|XP_009402203.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 71 3e-10 ref|XP_009412320.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 70 6e-10 >ref|XP_018678102.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Musa acuminata subsp. malaccensis] Length = 381 Score = 76.6 bits (187), Expect = 3e-12 Identities = 40/78 (51%), Positives = 54/78 (69%) Frame = +3 Query: 3 GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182 GR+RSGS GR QYLV +TNS+ PS GSV+ SS GE+E I+ +SS+ +T P +E Sbjct: 158 GRVRSGSHGRPQYLVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEP 217 Query: 183 SETTNDNAAHSNQVALLT 236 +E TN + AH++QV LT Sbjct: 218 AEVTNVSPAHASQVPFLT 235 >ref|XP_009389435.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Musa acuminata subsp. malaccensis] Length = 382 Score = 76.6 bits (187), Expect = 3e-12 Identities = 40/78 (51%), Positives = 54/78 (69%) Frame = +3 Query: 3 GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182 GR+RSGS GR QYLV +TNS+ PS GSV+ SS GE+E I+ +SS+ +T P +E Sbjct: 152 GRVRSGSHGRPQYLVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEP 211 Query: 183 SETTNDNAAHSNQVALLT 236 +E TN + AH++QV LT Sbjct: 212 AEVTNVSPAHASQVPFLT 229 >ref|XP_018678101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Musa acuminata subsp. malaccensis] Length = 388 Score = 76.6 bits (187), Expect = 3e-12 Identities = 40/78 (51%), Positives = 54/78 (69%) Frame = +3 Query: 3 GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182 GR+RSGS GR QYLV +TNS+ PS GSV+ SS GE+E I+ +SS+ +T P +E Sbjct: 158 GRVRSGSHGRPQYLVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEP 217 Query: 183 SETTNDNAAHSNQVALLT 236 +E TN + AH++QV LT Sbjct: 218 AEVTNVSPAHASQVPFLT 235 >ref|XP_009402203.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata subsp. malaccensis] ref|XP_009402211.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata subsp. malaccensis] ref|XP_009402218.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata subsp. malaccensis] Length = 376 Score = 70.9 bits (172), Expect = 3e-10 Identities = 37/76 (48%), Positives = 51/76 (67%) Frame = +3 Query: 12 RSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDESSET 191 RSGS G QYLV +TNS+ PS GS++ SS TR E+E T++ N + VT P ES+E Sbjct: 155 RSGSHGHPQYLVFSTNSNTPSVGSLSASSVTRVENESAPETVAANPLASVTTPVGESAEV 214 Query: 192 TNDNAAHSNQVALLTS 239 T+ H++Q++LLTS Sbjct: 215 TSVTPTHASQISLLTS 230 >ref|XP_009412320.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata subsp. malaccensis] ref|XP_018685905.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata subsp. malaccensis] Length = 374 Score = 70.1 bits (170), Expect = 6e-10 Identities = 38/80 (47%), Positives = 51/80 (63%) Frame = +3 Query: 3 GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182 GR+RSGS GR QYLV +TNSD S GS++ SS RGE+E ++ N ++P E Sbjct: 152 GRVRSGSHGRPQYLVFSTNSDAASVGSISSSSPPRGENEVAPAIVAANPTTPPATLVGEF 211 Query: 183 SETTNDNAAHSNQVALLTSE 242 SE T+ H+++VA LTSE Sbjct: 212 SELTSVAPTHASEVATLTSE 231