BLASTX nr result

ID: Cheilocostus21_contig00013886 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00013886
         (840 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018678102.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...    77   3e-12
ref|XP_009389435.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...    77   3e-12
ref|XP_018678101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...    77   3e-12
ref|XP_009402203.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...    71   3e-10
ref|XP_009412320.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...    70   6e-10

>ref|XP_018678102.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 381

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = +3

Query: 3   GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182
           GR+RSGS GR QYLV +TNS+ PS GSV+ SS   GE+E     I+ +SS+ +T P +E 
Sbjct: 158 GRVRSGSHGRPQYLVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEP 217

Query: 183 SETTNDNAAHSNQVALLT 236
           +E TN + AH++QV  LT
Sbjct: 218 AEVTNVSPAHASQVPFLT 235


>ref|XP_009389435.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 382

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = +3

Query: 3   GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182
           GR+RSGS GR QYLV +TNS+ PS GSV+ SS   GE+E     I+ +SS+ +T P +E 
Sbjct: 152 GRVRSGSHGRPQYLVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEP 211

Query: 183 SETTNDNAAHSNQVALLT 236
           +E TN + AH++QV  LT
Sbjct: 212 AEVTNVSPAHASQVPFLT 229


>ref|XP_018678101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 388

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = +3

Query: 3   GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182
           GR+RSGS GR QYLV +TNS+ PS GSV+ SS   GE+E     I+ +SS+ +T P +E 
Sbjct: 158 GRVRSGSHGRPQYLVFSTNSNTPSVGSVSASSAPIGENELAPAIIAADSSATITTPGEEP 217

Query: 183 SETTNDNAAHSNQVALLT 236
           +E TN + AH++QV  LT
Sbjct: 218 AEVTNVSPAHASQVPFLT 235


>ref|XP_009402203.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
           subsp. malaccensis]
 ref|XP_009402211.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
           subsp. malaccensis]
 ref|XP_009402218.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
           subsp. malaccensis]
          Length = 376

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 37/76 (48%), Positives = 51/76 (67%)
 Frame = +3

Query: 12  RSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDESSET 191
           RSGS G  QYLV +TNS+ PS GS++ SS TR E+E    T++ N  + VT P  ES+E 
Sbjct: 155 RSGSHGHPQYLVFSTNSNTPSVGSLSASSVTRVENESAPETVAANPLASVTTPVGESAEV 214

Query: 192 TNDNAAHSNQVALLTS 239
           T+    H++Q++LLTS
Sbjct: 215 TSVTPTHASQISLLTS 230


>ref|XP_009412320.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
           subsp. malaccensis]
 ref|XP_018685905.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Musa acuminata
           subsp. malaccensis]
          Length = 374

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 38/80 (47%), Positives = 51/80 (63%)
 Frame = +3

Query: 3   GRLRSGSDGRSQYLVPATNSDVPSDGSVAYSSTTRGESEPPAGTISVNSSSPVTNPRDES 182
           GR+RSGS GR QYLV +TNSD  S GS++ SS  RGE+E     ++ N ++P      E 
Sbjct: 152 GRVRSGSHGRPQYLVFSTNSDAASVGSISSSSPPRGENEVAPAIVAANPTTPPATLVGEF 211

Query: 183 SETTNDNAAHSNQVALLTSE 242
           SE T+    H+++VA LTSE
Sbjct: 212 SELTSVAPTHASEVATLTSE 231


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