BLASTX nr result

ID: Cheilocostus21_contig00013499 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00013499
         (720 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009388275.1| PREDICTED: RPM1-interacting protein 4 isofor...    92   8e-19
ref|XP_018677560.1| PREDICTED: RPM1-interacting protein 4 isofor...    92   8e-19
ref|XP_009415929.1| PREDICTED: RPM1-interacting protein 4-like [...    74   5e-12
ref|XP_010929749.1| PREDICTED: RPM1-interacting protein 4 isofor...    66   3e-09
ref|XP_010929750.1| PREDICTED: RPM1-interacting protein 4 isofor...    65   7e-09
ref|XP_009403603.1| PREDICTED: RPM1-interacting protein 4 isofor...    56   6e-06
ref|XP_018682518.1| PREDICTED: RPM1-interacting protein 4 isofor...    56   7e-06

>ref|XP_009388275.1| PREDICTED: RPM1-interacting protein 4 isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 223

 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 62/160 (38%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
 Frame = +3

Query: 246 MAKLEQEARAGNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXXXXX 425
           MA+  +  + GNWETA+S+PY+QYFDQAR K   K  + PN   ENS             
Sbjct: 1   MAQQAKVPKFGNWETAESVPYTQYFDQARSKNDRKTTTNPNGGTENSKIVSTDVESLVDA 60

Query: 426 XXXXTGSNHETTKPKESKPSRVN-GNVRRTDTETTCVPNGGAVPRSPAIPHHAKYVDQVN 602
               TGSN ETTKPK+ +P R + GN+ +TDT    V   G V R P             
Sbjct: 61  SSTKTGSNLETTKPKDPRPLRKDAGNINQTDTP---VSKEGVV-RKP------------- 103

Query: 603 HTDNQKKPSRSHGSSHESKPAERARN-PQSDKKLLASEGT 719
             DN+++ +R HG  ++ K  +RA N P    K  A EGT
Sbjct: 104 --DNKRRSNRQHG-GYQGKSVDRAANDPPPSGKKTALEGT 140


>ref|XP_018677560.1| PREDICTED: RPM1-interacting protein 4 isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 224

 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 62/160 (38%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
 Frame = +3

Query: 246 MAKLEQEARAGNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXXXXX 425
           MA+  +  + GNWETA+S+PY+QYFDQAR K   K  + PN   ENS             
Sbjct: 1   MAQQAKVPKFGNWETAESVPYTQYFDQARSKNDRKTTTNPNGGTENSKIVSTDVESLVDA 60

Query: 426 XXXXTGSNHETTKPKESKPSRVN-GNVRRTDTETTCVPNGGAVPRSPAIPHHAKYVDQVN 602
               TGSN ETTKPK+ +P R + GN+ +TDT    V   G V R P             
Sbjct: 61  SSTKTGSNLETTKPKDPRPLRKDAGNINQTDTP---VSKEGVV-RKP------------- 103

Query: 603 HTDNQKKPSRSHGSSHESKPAERARN-PQSDKKLLASEGT 719
             DN+++ +R HG  ++ K  +RA N P    K  A EGT
Sbjct: 104 --DNKRRSNRQHG-GYQGKSVDRAANDPPPSGKKTALEGT 140


>ref|XP_009415929.1| PREDICTED: RPM1-interacting protein 4-like [Musa acuminata subsp.
           malaccensis]
          Length = 234

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
 Frame = +3

Query: 243 QMAKLEQEARAGNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXXXX 422
           +M +  QE + GN ETA+++ Y QYF+Q +  +  K  +  N   ENS+           
Sbjct: 4   RMQQQTQEHKFGNRETAETVLYRQYFNQTQGAKDRKITTNLNDGNENSETTAKDIPPPEN 63

Query: 423 XXXXXTGSNHETTKPKESKPSRVNGNVRRTDTETTCVPNGGAVPRSPAIPHHAKYVDQVN 602
                     E  KP+++KP      + RTDT +  V + G + +SP  P   ++V + N
Sbjct: 64  AAPFTP----EAAKPRDAKP------IHRTDTPS--VHDEGVIHKSPINPRDRQHVARAN 111

Query: 603 HTDNQKKPSRSHGSSHESKPAERARN--PQSDKKL 701
           + DNQKKP+RS         AER  N  P SDK++
Sbjct: 112 YGDNQKKPNRSRDRYQGKPAAERTANDAPPSDKRI 146


>ref|XP_010929749.1| PREDICTED: RPM1-interacting protein 4 isoform X1 [Elaeis
           guineensis]
          Length = 254

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/137 (29%), Positives = 65/137 (47%)
 Frame = +3

Query: 246 MAKLEQEARAGNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXXXXX 425
           MA+  +    GNWETA+++PY+QYF+ AR+ RG      PN  ++N +            
Sbjct: 1   MAQRARVPEFGNWETARTVPYTQYFENARKNRGGGKMINPNDPEQNPE---AYADDVSPV 57

Query: 426 XXXXTGSNHETTKPKESKPSRVNGNVRRTDTETTCVPNGGAVPRSPAIPHHAKYVDQVNH 605
                G+N    K K+ +P+R  G   R  TE   + N     + PA P H +Y D+ ++
Sbjct: 58  QAPRAGTNPGAPKSKDGRPTRREGGDFRQTTEPP-LRNEAMGRKPPADPPHQRYGDRGSN 116

Query: 606 TDNQKKPSRSHGSSHES 656
             + ++P R +     S
Sbjct: 117 VHSHRRPGRLNSGDPSS 133


>ref|XP_010929750.1| PREDICTED: RPM1-interacting protein 4 isoform X2 [Elaeis
           guineensis]
          Length = 253

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 38/127 (29%), Positives = 61/127 (48%)
 Frame = +3

Query: 276 GNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXXXXXXXXXTGSNHE 455
           GNWETA+++PY+QYF+ AR+ RG      PN  ++N +                 G+N  
Sbjct: 10  GNWETARTVPYTQYFENARKNRGGGKMINPNDPEQNPE---AYADDVSPVQAPRAGTNPG 66

Query: 456 TTKPKESKPSRVNGNVRRTDTETTCVPNGGAVPRSPAIPHHAKYVDQVNHTDNQKKPSRS 635
             K K+ +P+R  G   R  TE   + N     + PA P H +Y D+ ++  + ++P R 
Sbjct: 67  APKSKDGRPTRREGGDFRQTTEPP-LRNEAMGRKPPADPPHQRYGDRGSNVHSHRRPGRL 125

Query: 636 HGSSHES 656
           +     S
Sbjct: 126 NSGDPSS 132


>ref|XP_009403603.1| PREDICTED: RPM1-interacting protein 4 isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 203

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = +3

Query: 246 MAKLEQEARAGNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXXXXX 425
           MA+  Q  + GNWETAQ  P++Q F+ AR ++  + A+      E+S+            
Sbjct: 1   MAQQAQVPQFGNWETAQDFPHTQCFNHARRRKSGRNATNLIGPNESSEAHAKATSSLDRA 60

Query: 426 XXXXTGSNHETTKPKESKPSRVN-GNVRRTDT 518
               T S  +TTKPK++ P + N GN RRT T
Sbjct: 61  APSTTESIADTTKPKDANPLKTNGGNFRRTAT 92


>ref|XP_018682518.1| PREDICTED: RPM1-interacting protein 4 isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 227

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +3

Query: 237 RRQMAKLEQEARAGNWETAQSIPYSQYFDQAREKRGDKAASYPNYHKENSDXXXXXXXXX 416
           RR   +  Q  + GNWETAQ  P++Q F+ AR ++  + A+      E+S+         
Sbjct: 22  RRSSTQQAQVPQFGNWETAQDFPHTQCFNHARRRKSGRNATNLIGPNESSEAHAKATSSL 81

Query: 417 XXXXXXXTGSNHETTKPKESKPSRVN-GNVRRTDT 518
                  T S  +TTKPK++ P + N GN RRT T
Sbjct: 82  DRAAPSTTESIADTTKPKDANPLKTNGGNFRRTAT 116


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