BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00012939
         (596 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                49   5e-06
emb|CAN61219.1| hypothetical protein VITISV_021296 [Vitis vinifera]    46   6e-06
emb|CAH23488.1| reverse transcriptase, partial [Solanum tuberosum]     42   1e-05

>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 48.5 bits (114), Expect(2) = 5e-06
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = +2

Query: 101  ERGKACMLKKTIY*FKQSPQASFLKFSQTANTVDLECSSTNHSIFYTMQRPYNDGIYLQP 280
            E GK C LKK +Y  KQSP+A F KFS+      L  S+ +HS+FY            Q 
Sbjct: 1049 ENGKVCHLKKPLYGLKQSPRAWFGKFSEVVQKFGLTKSNCDHSVFYR-----------QS 1097

Query: 281  QIGIVAPTLYFHG-HLP*GPYNGMLHICMFI---FHT 379
             +GI+   +Y     +    Y G+  + +F+   FHT
Sbjct: 1098 AVGIILLVVYVDDIVITRSDYAGISSLKLFLHSMFHT 1134



 Score = 29.6 bits (65), Expect(2) = 5e-06
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 49   DLAKEVYMQQPPQHAARGE 105
            DL +EVYM+QPP   A+GE
Sbjct: 1031 DLQEEVYMEQPPGFVAQGE 1049


>emb|CAN61219.1| hypothetical protein VITISV_021296 [Vitis vinifera]
          Length = 729

 Score = 46.2 bits (108), Expect(2) = 6e-06
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +2

Query: 101 ERGKACMLKKTIY*FKQSPQASFLKFSQTANTVDLECSSTNHSIFY 238
           E G  C L++++Y  KQSP+A F +FS      D+  S+ NHS+FY
Sbjct: 588 ESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFDMFRSTANHSVFY 633



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 49  DLAKEVYMQQPPQHAARGE 105
           DLA+EVYM+QPP   A+GE
Sbjct: 570 DLAEEVYMEQPPGFVAQGE 588


>emb|CAH23488.1| reverse transcriptase, partial [Solanum tuberosum]
          Length = 80

 Score = 42.0 bits (97), Expect(2) = 1e-05
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +2

Query: 98  EERGKACMLKKTIY*FKQSPQASFLKFSQTANTVDLECSSTNHSIFYTMQRPYNDGIYL 274
           E     C L++++Y  KQSP+A F KFS       +  S  +HS+FY    P N  IYL
Sbjct: 21  ESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAP-NRCIYL 78



 Score = 35.4 bits (80), Expect(2) = 1e-05
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +1

Query: 43  DCDLAKEVYMQQPPQHAARGERKSM 117
           D DLA+EVYM+QPP   A+GE  S+
Sbjct: 1   DGDLAEEVYMEQPPDFVAQGESSSL 25