BLASTX nr result
ID: Cheilocostus21_contig00012925
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00012925
(720 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009394449.1| PREDICTED: CRM-domain containing factor CFM3... 81 1e-13
ref|XP_010917579.1| PREDICTED: CRM-domain containing factor CFM3... 77 1e-12
ref|XP_008802838.1| PREDICTED: CRM-domain containing factor CFM3... 75 9e-12
dbj|BAJ90192.1| predicted protein, partial [Hordeum vulgare subs... 65 2e-08
gb|OQU83761.1| hypothetical protein SORBI_3005G169600, partial [... 64 4e-08
gb|OQU83762.1| hypothetical protein SORBI_3005G169600, partial [... 64 4e-08
ref|XP_002451033.2| CRM-domain containing factor CFM3, chloropla... 64 4e-08
gb|AGT17286.1| CRM family member [Saccharum hybrid cultivar R570] 63 1e-07
gb|PIA45213.1| hypothetical protein AQUCO_01700626v1 [Aquilegia ... 63 1e-07
gb|KQK95137.1| hypothetical protein SETIT_025968mg [Setaria ital... 62 3e-07
ref|XP_022684616.1| LOW QUALITY PROTEIN: CRM-domain containing f... 62 3e-07
ref|XP_015616314.1| PREDICTED: chloroplastic group IIA intron sp... 62 3e-07
gb|PAN43214.1| hypothetical protein PAHAL_H00556 [Panicum hallii] 60 1e-06
gb|PIN08835.1| Poly(A)-specific exoribonuclease PARN [Handroanth... 59 2e-06
ref|XP_020243158.1| CRM-domain containing factor CFM3, chloropla... 59 3e-06
ref|XP_003577404.2| PREDICTED: chloroplastic group IIA intron sp... 59 3e-06
ref|NP_001106061.1| CRM-domain containing factor CFM3, chloropla... 58 5e-06
ref|XP_020176972.1| CRM-domain containing factor CFM3, chloropla... 58 6e-06
ref|XP_020176971.1| CRM-domain containing factor CFM3, chloropla... 58 6e-06
>ref|XP_009394449.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial-like [Musa acuminata subsp.
malaccensis]
Length = 918
Score = 80.9 bits (198), Expect = 1e-13
Identities = 50/112 (44%), Positives = 61/112 (54%), Gaps = 23/112 (20%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYST-XXXXXXXXXXXAYLDTLNRSVAVDE 177
K+V QLRSELV +DNVKD+GDEELYA LDSAYST AYLDT N SVA+D
Sbjct: 754 KKVEQLRSELVHLDNVKDHGDEELYANLDSAYSTEDEEDSEDEGDEAYLDTFNGSVAIDR 813
Query: 178 E----------------------SAKDEYAAYLDTCLRALDSDTDEDGQTQN 267
+ S KDE+ +Y D + A+D +DE G Q+
Sbjct: 814 DDGDAHNHNDDDDYNEESEADGTSNKDEHDSYFDGWINAVDISSDEHGGAQS 865
>ref|XP_010917579.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Elaeis guineensis]
Length = 883
Score = 77.4 bits (189), Expect = 1e-12
Identities = 45/89 (50%), Positives = 53/89 (59%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVAVDEE 180
KRV QLRSELVQMDNVKD GDE+LYAKLDSAYST DE+
Sbjct: 768 KRVEQLRSELVQMDNVKDQGDEDLYAKLDSAYSTE----------------------DED 805
Query: 181 SAKDEYAAYLDTCLRALDSDTDEDGQTQN 267
+ ++ AYL T A+D D DEDG+ +N
Sbjct: 806 TEDEDDEAYLHTFNTAVDIDGDEDGRVEN 834
>ref|XP_008802838.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Phoenix dactylifera]
Length = 895
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/85 (51%), Positives = 49/85 (57%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVAVDEE 180
KRV QLRSELVQMDNVKD GDEELY KLDSAYST AYL T N +V +D
Sbjct: 768 KRVEQLRSELVQMDNVKDQGDEELYTKLDSAYSTEDEDTEDDDDEAYLHTFNTAVVID-- 825
Query: 181 SAKDEYAAYLDTCLRALDSDTDEDG 255
DEY + +D +DG
Sbjct: 826 --GDEYGRVENYANNGGAADGGDDG 848
>dbj|BAJ90192.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 65.5 bits (158), Expect = 2e-08
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVA---- 168
+RV QLRSELVQM++VKD GDEELYAKLDSAYS+ AY+ + + +A
Sbjct: 731 RRVNQLRSELVQMEDVKDQGDEELYAKLDSAYSSEDEDVEDEDDDAYIRSFDNPIARATA 790
Query: 169 --VDEESAKDEYAAYLDTCLRALDS-DTDEDGQTQNV 270
+E + +D ++Y + A D+ D DE+ + +V
Sbjct: 791 DDENETAIEDSESSYSNDYDSAEDNGDCDEEDEVNDV 827
>gb|OQU83761.1| hypothetical protein SORBI_3005G169600, partial [Sorghum bicolor]
Length = 817
Score = 64.3 bits (155), Expect = 4e-08
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYST-XXXXXXXXXXXAYLDTLNRSV---- 165
++V QL++ELVQM++VKD GDEELYAKLD+AYS+ AYL+ + V
Sbjct: 641 RKVAQLKAELVQMEDVKDQGDEELYAKLDAAYSSDEEDMEDEDDDEAYLERFDNEVAGAT 700
Query: 166 AVDEESAKDEYAAYLDTCLRALD-SDTDEDGQ 258
A D + D+ A Y D+ A D SD D+DG+
Sbjct: 701 AEDGSESVDDEADYPDSDDEAGDYSDEDDDGE 732
>gb|OQU83762.1| hypothetical protein SORBI_3005G169600, partial [Sorghum bicolor]
Length = 855
Score = 64.3 bits (155), Expect = 4e-08
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYST-XXXXXXXXXXXAYLDTLNRSV---- 165
++V QL++ELVQM++VKD GDEELYAKLD+AYS+ AYL+ + V
Sbjct: 679 RKVAQLKAELVQMEDVKDQGDEELYAKLDAAYSSDEEDMEDEDDDEAYLERFDNEVAGAT 738
Query: 166 AVDEESAKDEYAAYLDTCLRALD-SDTDEDGQ 258
A D + D+ A Y D+ A D SD D+DG+
Sbjct: 739 AEDGSESVDDEADYPDSDDEAGDYSDEDDDGE 770
>ref|XP_002451033.2| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Sorghum bicolor]
Length = 900
Score = 64.3 bits (155), Expect = 4e-08
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYST-XXXXXXXXXXXAYLDTLNRSV---- 165
++V QL++ELVQM++VKD GDEELYAKLD+AYS+ AYL+ + V
Sbjct: 724 RKVAQLKAELVQMEDVKDQGDEELYAKLDAAYSSDEEDMEDEDDDEAYLERFDNEVAGAT 783
Query: 166 AVDEESAKDEYAAYLDTCLRALD-SDTDEDGQ 258
A D + D+ A Y D+ A D SD D+DG+
Sbjct: 784 AEDGSESVDDEADYPDSDDEAGDYSDEDDDGE 815
>gb|AGT17286.1| CRM family member [Saccharum hybrid cultivar R570]
Length = 880
Score = 62.8 bits (151), Expect = 1e-07
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYL----DTLNRSVA 168
++V QL++ELVQM++VKD GDEELYAKLD+AY + AYL D + + A
Sbjct: 713 RKVEQLKAELVQMEDVKDQGDEELYAKLDAAYLSDEEDMEDEDDEAYLKRFHDEVAGATA 772
Query: 169 VDEESAKDEYAAYLDTCLRALD-SDTDEDGQ 258
D + D+ A + D+ A D SD D+DG+
Sbjct: 773 EDGNDSVDDEADHPDSDDEAGDYSDEDDDGE 803
>gb|PIA45213.1| hypothetical protein AQUCO_01700626v1 [Aquilegia coerulea]
Length = 908
Score = 62.8 bits (151), Expect = 1e-07
Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVAVDEE 180
KRV LRSEL QM+ VKD GDEELYAKLDSAY++ AYL+T E
Sbjct: 795 KRVELLRSELDQMETVKDQGDEELYAKLDSAYASEDEDTEDDGDEAYLETFGSENEDGSE 854
Query: 181 SAKDE-------YAAY--LDTCLRALDSDTDEDG 255
D ++ Y LD+ + D DT+ DG
Sbjct: 855 KESDSENSNLNLHSEYEMLDSAYASEDEDTEGDG 888
>gb|KQK95137.1| hypothetical protein SETIT_025968mg [Setaria italica]
Length = 879
Score = 61.6 bits (148), Expect = 3e-07
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVA-VDE 177
++V QLR+ELVQM+ VK+ GDEELYAKLDSAYS+ AYL + VA V
Sbjct: 726 RKVEQLRAELVQMEGVKEQGDEELYAKLDSAYSSDEEDMEDEDDEAYLKRFDNEVAGVTA 785
Query: 178 ESAKD---EYAAYLDTCLRA-----LDSDTDED 252
E D + A Y D+ A DS+ DED
Sbjct: 786 EDGDDPVYDEADYPDSEDEAEDDESFDSENDED 818
>ref|XP_022684616.1| LOW QUALITY PROTEIN: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial-like [Setaria italica]
Length = 884
Score = 61.6 bits (148), Expect = 3e-07
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVA-VDE 177
++V QLR+ELVQM+ VK+ GDEELYAKLDSAYS+ AYL + VA V
Sbjct: 731 RKVEQLRAELVQMEGVKEQGDEELYAKLDSAYSSDEEDMEDEDDEAYLKRFDNEVAGVTA 790
Query: 178 ESAKD---EYAAYLDTCLRA-----LDSDTDED 252
E D + A Y D+ A DS+ DED
Sbjct: 791 EDGDDPVYDEADYPDSEDEAEDDESFDSENDED 823
>ref|XP_015616314.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Oryza sativa Japonica Group]
sp|Q2R1U8.1|CFM3_ORYSJ RecName: Full=CRM-domain containing factor CFM3,
chloroplastic/mitochondrial; AltName: Full=Protein CRM
FAMILY MEMBER 3; Short=OsCFM3; Flags: Precursor
gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
dbj|BAT14685.1| Os11g0592400 [Oryza sativa Japonica Group]
Length = 886
Score = 61.6 bits (148), Expect = 3e-07
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVAV--- 171
+RV +L++EL+QM+ VK+ GD ELYAKLDSAYS+ AYL + + SVAV
Sbjct: 722 RRVKKLKAELLQMEGVKEEGDVELYAKLDSAYSSDEEDVEDEDDEAYLRSFDNSVAVQNG 781
Query: 172 DEESAKDEYAAYLDTCLRALDSDTDED 252
D+ ++ D A D D D DED
Sbjct: 782 DDRTSLDGSDANSDDEGDYSDEDDDED 808
>gb|PAN43214.1| hypothetical protein PAHAL_H00556 [Panicum hallii]
Length = 896
Score = 59.7 bits (143), Expect = 1e-06
Identities = 40/108 (37%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVA---- 168
KRV QL++ELVQM+ VK+ GDEELYAKLDSAYS+ AYL + VA
Sbjct: 732 KRVEQLKAELVQMEGVKEQGDEELYAKLDSAYSSDEEDMEDEDDEAYLKRFDDEVAGATT 791
Query: 169 ------------------VDEESAKDEYAAYLDTCLRALDSDTDEDGQ 258
D E +Y A D + DS+ DE+ +
Sbjct: 792 EGRTSLDGSDPVYDEADYPDSEDEAGDYYAGEDEGDESFDSEDDEEDE 839
>gb|PIN08835.1| Poly(A)-specific exoribonuclease PARN [Handroanthus impetiginosus]
Length = 893
Score = 59.3 bits (142), Expect = 2e-06
Identities = 36/87 (41%), Positives = 47/87 (54%)
Frame = +1
Query: 4 RVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVAVDEES 183
RV QLRSE+ QM VKD GDEELY KLDSAY + AYL+T + ++S
Sbjct: 787 RVNQLRSEIEQMAAVKDQGDEELYNKLDSAYPSEDEDSEEEDDDAYLETYDSDNDAGDDS 846
Query: 184 AKDEYAAYLDTCLRALDSDTDEDGQTQ 264
+ AYL+T D E+ +T+
Sbjct: 847 NDTAHNAYLET---NFPYDVKEESETE 870
>ref|XP_020243158.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial,
partial [Asparagus officinalis]
Length = 853
Score = 58.9 bits (141), Expect = 3e-06
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSV-AVDE 177
+RV L+SEL QM++VK+ GDEELY+KLDSAYST YL+T + + ++ +
Sbjct: 756 RRVEALKSELCQMEDVKEQGDEELYSKLDSAYSTEDEDTEDETDETYLETFDTAADSISD 815
Query: 178 ESAKDEYAAYLDTCLRALDSDTDEDGQTQN 267
E +D+ + +SD DED +N
Sbjct: 816 EYNEDDEGD--EDASGDSNSDGDEDFDDEN 843
>ref|XP_003577404.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
gb|KQJ88010.1| hypothetical protein BRADI_4g14900v3 [Brachypodium distachyon]
Length = 886
Score = 58.5 bits (140), Expect = 3e-06
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSVAVDEE 180
+RV QLRSELVQ++ KD GD ELYAKLDSAYS+ AYL + + +V D
Sbjct: 721 RRVNQLRSELVQIEGAKDQGDVELYAKLDSAYSSEDEDVEDEDDEAYLRSFDSAVGRDTT 780
Query: 181 SAKDEYAAYLDTCLRALDSDTDEDG 255
+E T L DS +++G
Sbjct: 781 DDGNE------TILHDSDSSYEDNG 799
>ref|NP_001106061.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial [Zea
mays]
sp|A7XN92.1|CFM3_MAIZE RecName: Full=CRM-domain containing factor CFM3,
chloroplastic/mitochondrial; AltName: Full=Protein CRM
FAMILY MEMBER 3; Short=ZmCFM3; Flags: Precursor
gb|ABU96081.1| CRM family member 3 [Zea mays]
gb|ONM27110.1| CRM family member3 [Zea mays]
Length = 842
Score = 58.2 bits (139), Expect = 5e-06
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNRSV--AVD 174
++V +L++ELVQM++VK+ GDEELYAKLD+AYS+ AYL + V A
Sbjct: 714 RKVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRFDNEVAGATA 773
Query: 175 EESAKDEYAAYLD 213
++ D+Y + D
Sbjct: 774 DDDGSDDYTSAAD 786
>ref|XP_020176972.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
isoform X2 [Aegilops tauschii subsp. tauschii]
Length = 842
Score = 57.8 bits (138), Expect = 6e-06
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNR-----SV 165
+RV QLRSELVQ+++ K GDEELYAKLDSAYS+ AYL + + +V
Sbjct: 708 RRVNQLRSELVQVEDAKGQGDEELYAKLDSAYSSEDEDVEDEDDEAYLRSFDNPIVRATV 767
Query: 166 AVDEESAKDEYAAYLDTCLRALDS-DTDED 252
+E + D ++Y + A D+ D DED
Sbjct: 768 DENETAIADSESSYSNDDDSAEDNGDCDED 797
>ref|XP_020176971.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
isoform X1 [Aegilops tauschii subsp. tauschii]
Length = 852
Score = 57.8 bits (138), Expect = 6e-06
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +1
Query: 1 KRVVQLRSELVQMDNVKDNGDEELYAKLDSAYSTXXXXXXXXXXXAYLDTLNR-----SV 165
+RV QLRSELVQ+++ K GDEELYAKLDSAYS+ AYL + + +V
Sbjct: 718 RRVNQLRSELVQVEDAKGQGDEELYAKLDSAYSSEDEDVEDEDDEAYLRSFDNPIVRATV 777
Query: 166 AVDEESAKDEYAAYLDTCLRALDS-DTDED 252
+E + D ++Y + A D+ D DED
Sbjct: 778 DENETAIADSESSYSNDDDSAEDNGDCDED 807