BLASTX nr result

ID: Cheilocostus21_contig00012838 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00012838
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009390059.1| PREDICTED: mannose-specific lectin 3-like [M...   114   8e-28

>ref|XP_009390059.1| PREDICTED: mannose-specific lectin 3-like [Musa acuminata subsp.
           malaccensis]
          Length = 296

 Score =  114 bits (286), Expect = 8e-28
 Identities = 57/107 (53%), Positives = 77/107 (71%)
 Frame = +1

Query: 4   GNFSLVLETTCTIHIRRNNDQDSGFYSAAAKWLTGKRSAPATCKTQLTTAGELAAYKQIF 183
           GN++LVLETTCT+HIR  ++ ++   +++ +   G ++   TCK QL++ GEL AY+ +F
Sbjct: 192 GNYTLVLETTCTMHIRGASEVEA---ASSREERRGLQATAPTCKAQLSSDGELTAYRLLF 248

Query: 184 SDEGGLDDVWLRTWGSDFTVVTKESIAALVDRDLRAEMVIYPAKQTL 324
            +EG L DVWLRTWGSDFT  T ESIAALVD     E++IYP KQTL
Sbjct: 249 PEEGSLQDVWLRTWGSDFTKKTPESIAALVDGGSAGELLIYPMKQTL 295


Top