BLASTX nr result

ID: Cheilocostus21_contig00012793 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00012793
         (808 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009419126.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    93   4e-18

>ref|XP_009419126.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Musa acuminata
           subsp. malaccensis]
 ref|XP_009419127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Musa acuminata
           subsp. malaccensis]
          Length = 336

 Score = 92.8 bits (229), Expect = 4e-18
 Identities = 59/136 (43%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
 Frame = -1

Query: 808 LSLHNSCPICRLPLSSPIETA-------YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 650
           LSLHNSCPICR PL SP ETA       +                               
Sbjct: 196 LSLHNSCPICRSPLPSPDETAGGAEESDHPTGLLAEGDGDPDALALTLSAADDEALVLTA 255

Query: 649 XLWQIRRQHLLSFQVRPLALAAMNATLIQMPSVDIAMAGSGEVLSSDCPVGGDGAAIGGT 470
            LWQ+RRQH LSF VR  A A M+++LIQM  VDIA+A +GE+ S + P+  DG A+ G 
Sbjct: 256 ALWQVRRQHRLSFPVRSPASATMDSSLIQMAQVDIALANTGEMPSLEFPMERDGTAMAGR 315

Query: 469 A-NSEDTVMDEARENF 425
             + EDT+M E RENF
Sbjct: 316 VDDDEDTMMLEIRENF 331


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