BLASTX nr result

ID: Cheilocostus21_contig00012570 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00012570
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU22230.1| hypothetical protein TSUD_227660 [Trifolium subt...    57   2e-06
dbj|GAU22980.1| hypothetical protein TSUD_98080 [Trifolium subte...    57   3e-06
dbj|GAU35768.1| hypothetical protein TSUD_61280 [Trifolium subte...    55   8e-06

>dbj|GAU22230.1| hypothetical protein TSUD_227660 [Trifolium subterraneum]
          Length = 419

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = -2

Query: 248 FFGWKLM*QRLPTSSLFALFGL---GRACQCIFCAKFHDSVSHVFFQCEFIMNIWIMFEN 78
           FFGW+L+ +R PT       G+    +   CIFC+  H+  SH+FFQC F  ++W     
Sbjct: 325 FFGWRLLLERPPTRVALNHRGILLNQQDLSCIFCSLIHEDCSHLFFQCPFSKSVW----E 380

Query: 77  LVCISL-KPQPTWIEG 33
            VC  + K  PTW EG
Sbjct: 381 AVCTWVEKGYPTWAEG 396


>dbj|GAU22980.1| hypothetical protein TSUD_98080 [Trifolium subterraneum]
          Length = 1316

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = -2

Query: 245  FGWKLM*QRLPTSSLFALFGLGRACQCIFCAKFHDSVSHVFFQCEFIMNIWIMFENLVCI 66
            F W+LM  ++PT     L G      C FC K  ++  H+FF+CEF + IW  F N  C+
Sbjct: 987  FVWRLMHNKVPTDDNLMLRGCALPSMCNFCNKHVETSFHIFFECEFAVKIWSWFAN--CL 1044

Query: 65   SLKPQPTWIEGSW 27
            +L  Q T +E  W
Sbjct: 1045 NLVLQFTSMEDIW 1057


>dbj|GAU35768.1| hypothetical protein TSUD_61280 [Trifolium subterraneum]
          Length = 449

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -2

Query: 239 WKLM*QRLPTSSLFALFGLGRACQCIFCAKFHDSVSHVFFQCEFIMNIWIMFENLVCISL 60
           W+LM  ++PT     + G      C  C K  +S  H+FF+CEF + IW  F N  C+ +
Sbjct: 121 WRLMHDKVPTDDNLKISGCSLPSMCSLCCKSEESSFHIFFECEFAIKIWSWFAN--CLDM 178

Query: 59  KPQPTWIEGSW 27
             Q T +E  W
Sbjct: 179 VLQFTSMEDMW 189


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