BLASTX nr result

ID: Cheilocostus21_contig00012423 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00012423
         (873 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPR94564.1| hypothetical protein GOBAR_AA26102 [Gossypium bar...    64   7e-08
ref|XP_020683307.1| DEAD-box ATP-dependent RNA helicase 15-like ...    64   1e-07
gb|PPD82193.1| hypothetical protein GOBAR_DD20879 [Gossypium bar...    64   1e-07
ref|XP_010231905.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   4e-07
gb|OEL29981.1| DEAD-box ATP-dependent RNA helicase 56 [Dichanthe...    61   6e-07

>gb|PPR94564.1| hypothetical protein GOBAR_AA26102 [Gossypium barbadense]
          Length = 458

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 31/41 (75%), Positives = 32/41 (78%)
 Frame = -2

Query: 125 LKGSRRLFFTYWGTAPILFGSPPVQHECIPQAILGMDVICQ 3
           LKGSRRL+FTY G    LF    VQHECIPQAILGMDVICQ
Sbjct: 72  LKGSRRLYFTYAGFLDALFFGSSVQHECIPQAILGMDVICQ 112


>ref|XP_020683307.1| DEAD-box ATP-dependent RNA helicase 15-like isoform X4 [Dendrobium
           catenatum]
          Length = 376

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 107 LFFTYWGT-APILFGSPPVQHECIPQAILGMDVICQ 3
           +FFT+WG  API FG P VQHECIPQAILGMDVICQ
Sbjct: 3   MFFTHWGYFAPIFFGYPSVQHECIPQAILGMDVICQ 38


>gb|PPD82193.1| hypothetical protein GOBAR_DD20879 [Gossypium barbadense]
          Length = 622

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 31/41 (75%), Positives = 32/41 (78%)
 Frame = -2

Query: 125 LKGSRRLFFTYWGTAPILFGSPPVQHECIPQAILGMDVICQ 3
           LKGSRRL+FTY G    LF    VQHECIPQAILGMDVICQ
Sbjct: 72  LKGSRRLYFTYPGFLDALFFGSSVQHECIPQAILGMDVICQ 112


>ref|XP_010231905.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15 isoform X2
           [Brachypodium distachyon]
          Length = 377

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -2

Query: 113 RRLFFTYWGTAPILFGSPPVQHECIPQAILGMDVICQ 3
           +++ F++WG API F S  VQHECIPQAILGMDVICQ
Sbjct: 3   QKVKFSHWGAAPIFFASTSVQHECIPQAILGMDVICQ 39


>gb|OEL29981.1| DEAD-box ATP-dependent RNA helicase 56 [Dichanthelium oligosanthes]
          Length = 390

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -2

Query: 101 FTYWGTAPILFGSPPVQHECIPQAILGMDVICQ 3
           FT+WG A I FGS  VQHECIPQAILGMDVICQ
Sbjct: 15  FTHWGAASISFGSTSVQHECIPQAILGMDVICQ 47


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