BLASTX nr result

ID: Cheilocostus21_contig00012096 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00012096
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009392469.1| PREDICTED: ninja-family protein 2-like [Musa...   116   1e-27
ref|XP_009406311.1| PREDICTED: ninja-family protein AFP3-like [M...    67   7e-10
ref|XP_010936468.1| PREDICTED: ninja-family protein AFP3 [Elaeis...    56   5e-06

>ref|XP_009392469.1| PREDICTED: ninja-family protein 2-like [Musa acuminata subsp.
           malaccensis]
          Length = 368

 Score =  116 bits (290), Expect = 1e-27
 Identities = 79/189 (41%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
 Frame = +2

Query: 2   EKRNSIRLGAARSDEDADVGRSWRAAVMTDVFLEPQIGSQLRGVFKVDSTPTPPDL---S 172
           EKRN I+  A+RSDEDAD  +S     M +  L+P  G + RGVF      TP +L   +
Sbjct: 128 EKRNCIKPDASRSDEDADGRKSLITPNMINGRLKPLKGKEFRGVF---GAATPSELLAWA 184

Query: 173 AGTKSSAALP-ADAPGSFLSIPRXXXXXXXXXXXKFEFQRQMPAKEFDTSLCCSKRDAKR 349
           AG+KS+AA P  D  G    IP             FEF+R+ PA+ FD SL     D  +
Sbjct: 185 AGSKSTAASPPVDVTGCLPPIPHGSVRASGSSYGVFEFKRKTPAQGFDLSLFIRDIDDTK 244

Query: 350 TTKVISVDEATNTVPV-----VRKPITAVREEDSLKKVTPNVTNLGRSIMGEMPFVSTTG 514
                  D   N         VRKPIT V EEDSLK    +  N GR+++GEMP VST G
Sbjct: 245 NASSAHSDSIRNATSSTSTLEVRKPITVVGEEDSLKNFATDGVNRGRNMVGEMPCVSTRG 304

Query: 515 DCPNGRRVE 541
           D PNGR++E
Sbjct: 305 DGPNGRKIE 313


>ref|XP_009406311.1| PREDICTED: ninja-family protein AFP3-like [Musa acuminata subsp.
           malaccensis]
          Length = 356

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 66/191 (34%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
 Frame = +2

Query: 2   EKRNSIRLGAARSDEDADVGRSWRAAVMTDVFLEPQIGSQLRGVFKVDSTPTPPDLSAGT 181
           EKR SI+    +SD   D G+S       +  L   IGSQ  G+F V + P     ++G+
Sbjct: 133 EKRKSIKSCNPKSDVGMDGGKSLAQPCTVNGRLSLPIGSQFSGLFSVATPPGLRPWTSGS 192

Query: 182 KSSAALPADAPGSFLSIPRXXXXXXXXXXXKFEFQRQMPAKE-FDTSLCCSKRDAKRTTK 358
           K +AA      GS                   E + Q PA+  F+     S  D   T  
Sbjct: 193 KITAA-----QGS-------------------ELENQTPARGLFNLPAFSSNADFNDTAT 228

Query: 359 VISVD-EATNTVPVV---RKPITAVR-EEDSLKKVTPNV-----TNLGRSIMGEMPFVST 508
           V SV    T   P+V   R  IT +  EED L+K    V      +LGR+++GEMP VST
Sbjct: 229 VQSVSAHKTAIAPLVSGARITITPIGGEEDPLEKKKKKVRVTRDASLGRNMIGEMPCVST 288

Query: 509 TGDCPNGRRVE 541
            GD PNGRR+E
Sbjct: 289 RGDGPNGRRIE 299


>ref|XP_010936468.1| PREDICTED: ninja-family protein AFP3 [Elaeis guineensis]
          Length = 360

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 63/198 (31%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
 Frame = +2

Query: 2   EKRNSIRLGAARSDEDADVGRSWRAAVMTDV-FLEPQI--------GSQLRGVFKVDSTP 154
           EKRNS++ G  R DED + G+S  A+ +T V   E  +        G Q  GV    S P
Sbjct: 119 EKRNSLKRGT-RVDEDGEGGQSSAASPLTKVGSFEVGLDGGHGLPGGGQFGGVLNGASPP 177

Query: 155 TPPDLSAGTKSSAALPADAPGSFLSIPRXXXXXXXXXXXKFEFQRQMPAKEFDTSLCCSK 334
             P  +A +   A+ P  + GS  S                      P + FD S   S 
Sbjct: 178 GMPGWAASSGQVASWPM-SQGSIGS--------QGSSSSCISEHDSRPKQGFDASGFTSC 228

Query: 335 RDAKRTTKVISVDE-------ATNTVPVVRKPITAVR--EEDSLKKVTPNVTNLGRSIMG 487
            D +  +   S+ E       A     VV K I  V   EED  KK       + R+++ 
Sbjct: 229 ADVRSPSTFQSLPEHAIHQMAANAPTSVVGKAIGTVGGGEEDPAKKNAGRAKEMERNMIE 288

Query: 488 EMPFVSTTGDCPNGRRVE 541
           EMP VST GD PNGRR+E
Sbjct: 289 EMPCVSTKGDGPNGRRIE 306


Top