BLASTX nr result

ID: Cheilocostus21_contig00011900 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00011900
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009388421.1| PREDICTED: inactive poly [ADP-ribose] polyme...    64   1e-08
ref|XP_018675605.1| PREDICTED: inactive poly [ADP-ribose] polyme...    60   2e-07
ref|XP_009384133.1| PREDICTED: inactive poly [ADP-ribose] polyme...    60   2e-07
ref|XP_018685921.1| PREDICTED: inactive poly [ADP-ribose] polyme...    58   1e-06
ref|XP_009413220.1| PREDICTED: probable inactive poly [ADP-ribos...    58   1e-06

>ref|XP_009388421.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Musa
           acuminata subsp. malaccensis]
 ref|XP_018678036.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Musa
           acuminata subsp. malaccensis]
          Length = 575

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/67 (50%), Positives = 43/67 (64%)
 Frame = -3

Query: 205 MEQMNGKASDKGKTIDLKRKRDSSVPSTDDGHLLAAEELIAGQASLRTCARSICKISGGC 26
           ME +N K  DKGK  DLKRKR+S V S D GH L   + I GQ+SLR C R+ CK +  C
Sbjct: 1   MEYLNVKVLDKGKNCDLKRKRNSDVCSIDIGHGL--HQPIVGQSSLRACTRTRCKTNLCC 58

Query: 25  YQDNHVV 5
             +NH++
Sbjct: 59  SPENHIL 65


>ref|XP_018675605.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X2 [Musa acuminata subsp. malaccensis]
          Length = 576

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/67 (49%), Positives = 39/67 (58%)
 Frame = -3

Query: 205 MEQMNGKASDKGKTIDLKRKRDSSVPSTDDGHLLAAEELIAGQASLRTCARSICKISGGC 26
           MEQ N K  DKG+  DLKRKRDS+V  T+D H L A    A Q+SL+      CK    C
Sbjct: 1   MEQKNVKVLDKGEKCDLKRKRDSAVYVTNDSHGLVAHPHTAVQSSLKVYTGMSCKTGLIC 60

Query: 25  YQDNHVV 5
           Y  NH+V
Sbjct: 61  YPGNHIV 67


>ref|XP_009384133.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X1 [Musa acuminata subsp. malaccensis]
          Length = 584

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/67 (49%), Positives = 39/67 (58%)
 Frame = -3

Query: 205 MEQMNGKASDKGKTIDLKRKRDSSVPSTDDGHLLAAEELIAGQASLRTCARSICKISGGC 26
           MEQ N K  DKG+  DLKRKRDS+V  T+D H L A    A Q+SL+      CK    C
Sbjct: 1   MEQKNVKVLDKGEKCDLKRKRDSAVYVTNDSHGLVAHPHTAVQSSLKVYTGMSCKTGLIC 60

Query: 25  YQDNHVV 5
           Y  NH+V
Sbjct: 61  YPGNHIV 67


>ref|XP_018685921.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X3 [Musa acuminata subsp. malaccensis]
          Length = 572

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -3

Query: 205 MEQMNGKASDKGKTIDLKRKRDSSVPSTDDGHLL--AAEELIAGQASLRTCARSICKISG 32
           MEQMN KA DKG+  DLKRKRD ++  TD G  L   ++ LI GQ+S R      CK + 
Sbjct: 1   MEQMNVKALDKGEKHDLKRKRDPALYFTDVGQGLVGCSDHLIPGQSSRRVSITKGCKTNL 60

Query: 31  GCYQDNHVV 5
           GC+ + H++
Sbjct: 61  GCHPETHIL 69


>ref|XP_009413220.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO1
           isoform X1 [Musa acuminata subsp. malaccensis]
 ref|XP_009413221.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO1
           isoform X1 [Musa acuminata subsp. malaccensis]
 ref|XP_018685919.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO1
           isoform X1 [Musa acuminata subsp. malaccensis]
 ref|XP_018685920.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO1
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 586

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -3

Query: 205 MEQMNGKASDKGKTIDLKRKRDSSVPSTDDGHLL--AAEELIAGQASLRTCARSICKISG 32
           MEQMN KA DKG+  DLKRKRD ++  TD G  L   ++ LI GQ+S R      CK + 
Sbjct: 1   MEQMNVKALDKGEKHDLKRKRDPALYFTDVGQGLVGCSDHLIPGQSSRRVSITKGCKTNL 60

Query: 31  GCYQDNHVV 5
           GC+ + H++
Sbjct: 61  GCHPETHIL 69


Top