BLASTX nr result

ID: Cheilocostus21_contig00011776 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00011776
         (633 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009384224.1| PREDICTED: DNA repair protein XRCC2 homolog ...    62   7e-08
ref|XP_017697182.1| PREDICTED: DNA repair protein XRCC2 homolog ...    59   1e-06
ref|XP_008783412.1| PREDICTED: DNA repair protein XRCC2 homolog ...    59   1e-06

>ref|XP_009384224.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018676439.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 335

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +2

Query: 122 DRYAYDQERGTSPIYTSEWMQPPLNIKDQFAIGNDGIFLIS 244
           D+  YD++ GT PIY S+W+QPPLN+ DQFA+G+ GIFLI+
Sbjct: 295 DKCTYDRKYGTMPIYMSKWVQPPLNVNDQFAVGDGGIFLIT 335


>ref|XP_017697182.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Phoenix
           dactylifera]
          Length = 323

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +2

Query: 119 VDRYAYDQERGTSPIYTSEWMQPPLNIKDQFAIGNDGIFLIS 244
           +D    D + GT P YTS+W+QPPLNIKD+FA+ +DGIFLI+
Sbjct: 282 LDEIISDGQYGTLPTYTSQWVQPPLNIKDKFAVRDDGIFLIT 323


>ref|XP_008783412.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Phoenix
           dactylifera]
 ref|XP_008783415.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Phoenix
           dactylifera]
 ref|XP_008783417.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Phoenix
           dactylifera]
 ref|XP_017697179.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Phoenix
           dactylifera]
 ref|XP_017697180.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Phoenix
           dactylifera]
 ref|XP_017697181.1| PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Phoenix
           dactylifera]
          Length = 344

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +2

Query: 119 VDRYAYDQERGTSPIYTSEWMQPPLNIKDQFAIGNDGIFLIS 244
           +D    D + GT P YTS+W+QPPLNIKD+FA+ +DGIFLI+
Sbjct: 303 LDEIISDGQYGTLPTYTSQWVQPPLNIKDKFAVRDDGIFLIT 344


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