BLASTX nr result

ID: Cheilocostus21_contig00011711 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00011711
         (590 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009381476.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   109   3e-24
ref|XP_018684924.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   107   2e-23
ref|XP_009410122.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   107   2e-23
ref|XP_009401442.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    91   1e-17
gb|OAY69727.1| Ubiquitin carboxyl-terminal hydrolase 17 [Ananas ...    63   5e-08
ref|XP_020081616.1| ubiquitin carboxyl-terminal hydrolase 17-lik...    63   5e-08

>ref|XP_009381476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Musa
            acuminata subsp. malaccensis]
          Length = 1020

 Score =  109 bits (273), Expect = 3e-24
 Identities = 72/135 (53%), Positives = 83/135 (61%), Gaps = 12/135 (8%)
 Frame = +2

Query: 119  WEHLSRDSAS-NLNSSLRPFDDSDEFTHSPLGPRQISKADPSGQM-DVSSIDDSGSNASF 292
            WE +S +S S NLNS LR  ++SD FT SPL  R  SKA  SG M D    DDS   A+ 
Sbjct: 887  WERMSGESDSVNLNSPLRVLEESDGFTRSPLSSRHSSKAVLSGSMPDHHRGDDSECIANS 946

Query: 293  SGREIDRAEDER----------SSSFLYLDKNRCYRNLIEHPRTVESDWICQNEVKSGVV 442
            SGREI++ E ER          S SFLY DKN   RNL E  R +E+ WI  NEVKSG +
Sbjct: 947  SGREINQVEAERPGCVKHHSDESRSFLYADKNEHCRNLTEQCRAIETGWINPNEVKSG-I 1005

Query: 443  LLRRQSRDITARTFY 487
            LLRR SR+ TARTFY
Sbjct: 1006 LLRRPSRERTARTFY 1020


>ref|XP_018684924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like isoform X2
            [Musa acuminata subsp. malaccensis]
          Length = 1040

 Score =  107 bits (267), Expect = 2e-23
 Identities = 67/135 (49%), Positives = 85/135 (62%), Gaps = 12/135 (8%)
 Frame = +2

Query: 119  WEHLSRDSAS-NLNSSLRPFDDSDEFTHSPLGPRQISKADPSGQM-DVSSIDDSGSNASF 292
            WEH+S +S S NLNS LR F+DSD F HSP G  + SKA  +G + D+ S +DSGSNAS 
Sbjct: 907  WEHMSGESDSINLNSPLRIFEDSDGFAHSPRGSVRSSKAVLNGSLPDLPSSNDSGSNASC 966

Query: 293  SGREIDRAEDER----------SSSFLYLDKNRCYRNLIEHPRTVESDWICQNEVKSGVV 442
            SGRE ++ E ER          + S LY D+     N  EH RT+ +DWI  N VKSG +
Sbjct: 967  SGRETNQVEAERYDRIKHDSNGNPSSLYSDEREHCINSTEHTRTLVTDWISPNNVKSG-I 1025

Query: 443  LLRRQSRDITARTFY 487
            LLRR + + TA+TFY
Sbjct: 1026 LLRRPTSERTAQTFY 1040


>ref|XP_009410122.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
            [Musa acuminata subsp. malaccensis]
          Length = 1050

 Score =  107 bits (267), Expect = 2e-23
 Identities = 67/135 (49%), Positives = 85/135 (62%), Gaps = 12/135 (8%)
 Frame = +2

Query: 119  WEHLSRDSAS-NLNSSLRPFDDSDEFTHSPLGPRQISKADPSGQM-DVSSIDDSGSNASF 292
            WEH+S +S S NLNS LR F+DSD F HSP G  + SKA  +G + D+ S +DSGSNAS 
Sbjct: 917  WEHMSGESDSINLNSPLRIFEDSDGFAHSPRGSVRSSKAVLNGSLPDLPSSNDSGSNASC 976

Query: 293  SGREIDRAEDER----------SSSFLYLDKNRCYRNLIEHPRTVESDWICQNEVKSGVV 442
            SGRE ++ E ER          + S LY D+     N  EH RT+ +DWI  N VKSG +
Sbjct: 977  SGRETNQVEAERYDRIKHDSNGNPSSLYSDEREHCINSTEHTRTLVTDWISPNNVKSG-I 1035

Query: 443  LLRRQSRDITARTFY 487
            LLRR + + TA+TFY
Sbjct: 1036 LLRRPTSERTAQTFY 1050


>ref|XP_009401442.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Musa
            acuminata subsp. malaccensis]
          Length = 1016

 Score = 90.5 bits (223), Expect = 1e-17
 Identities = 65/141 (46%), Positives = 79/141 (56%), Gaps = 18/141 (12%)
 Frame = +2

Query: 119  WEHLSRDSASNLNSSLRPFDDSDEFTHSPLGPRQISKADPSGQMDVSSIDDSGSNASFSG 298
            WE +S +S    ++SLR   +S+  THSPL  R  SK            DDSG NAS SG
Sbjct: 886  WECMSGESDCINSNSLRGSKESNGLTHSPLFSRHSSKKVLH--------DDSGRNASSSG 937

Query: 299  REIDR------------------AEDERSSSFLYLDKNRCYRNLIEHPRTVESDWICQNE 424
            REID                   +E  +SSSFLY DK++  R + EH  TVE DWI  +E
Sbjct: 938  REIDHVEVGRLGPMKHQGGRTTCSEGSKSSSFLYHDKSQICR-VTEHCSTVEIDWINPSE 996

Query: 425  VKSGVVLLRRQSRDITARTFY 487
            VKSGVV LRR SR+ITA+TFY
Sbjct: 997  VKSGVV-LRRPSREITAQTFY 1016


>gb|OAY69727.1| Ubiquitin carboxyl-terminal hydrolase 17 [Ananas comosus]
          Length = 945

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = +2

Query: 131  SRDSASNLNSSLRPFDDSDEFTHSPLGPRQISKADPSGQMDVSSIDDSGSNASFSGREID 310
            +RDS S    S   F DSD  + +    R   + +  G        +S SN S SGRE+D
Sbjct: 831  TRDSTSTEEYSEYLFGDSDRMSWNNSPLRYSDETENGG--------NSASNPSSSGREVD 882

Query: 311  RAE----DERSSSFLYLDKNRCYRNLIEHPRTVESDWICQNEVKSGVVLLRRQSRDITAR 478
              E       S SFLY D ++  R L E  R VE+DW   N VK+  VLLRR +R+ T +
Sbjct: 883  GLEVGFEGGESPSFLYSDTSKQRRELTEQSREVETDWANPNVVKAN-VLLRRPTRERTTQ 941

Query: 479  TFY 487
             FY
Sbjct: 942  PFY 944


>ref|XP_020081616.1| ubiquitin carboxyl-terminal hydrolase 17-like [Ananas comosus]
          Length = 956

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = +2

Query: 131  SRDSASNLNSSLRPFDDSDEFTHSPLGPRQISKADPSGQMDVSSIDDSGSNASFSGREID 310
            +RDS S    S   F DSD  + +    R   + +  G        +S SN S SGRE+D
Sbjct: 842  TRDSTSTEEYSEYLFGDSDRMSWNNSPLRYSDETENGG--------NSASNPSSSGREVD 893

Query: 311  RAE----DERSSSFLYLDKNRCYRNLIEHPRTVESDWICQNEVKSGVVLLRRQSRDITAR 478
              E       S SFLY D ++  R L E  R VE+DW   N VK+  VLLRR +R+ T +
Sbjct: 894  GLEVGFEGGESPSFLYSDTSKQRRELTEQSREVETDWANPNVVKAN-VLLRRPTRERTTQ 952

Query: 479  TFY 487
             FY
Sbjct: 953  PFY 955


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