BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00011607
         (2589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018684753.1| PREDICTED: DNA-directed RNA polymerase II su...  1697   0.0  
ref|XP_010920288.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1682   0.0  
ref|XP_020578945.1| DNA-directed RNA polymerase II subunit RPB2 ...  1680   0.0  
ref|XP_008801262.1| PREDICTED: DNA-directed RNA polymerase II su...  1675   0.0  
ref|XP_015690688.1| PREDICTED: DNA-directed RNA polymerase II su...  1674   0.0  
ref|XP_006650345.2| PREDICTED: DNA-directed RNA polymerase II su...  1674   0.0  
ref|XP_020677799.1| DNA-directed RNA polymerase II subunit RPB2 ...  1672   0.0  
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...  1672   0.0  
gb|PKA65122.1| DNA-directed RNA polymerase II subunit RPB2 [Apos...  1672   0.0  
ref|XP_020094305.1| DNA-directed RNA polymerase II subunit RPB2 ...  1671   0.0  
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo...  1668   0.0  
ref|XP_015631661.1| PREDICTED: DNA-directed RNA polymerase II su...  1668   0.0  
ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II su...  1667   0.0  
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su...  1667   0.0  
ref|XP_020532114.1| DNA-directed RNA polymerase II subunit RPB2 ...  1663   0.0  
ref|XP_006859038.1| DNA-directed RNA polymerase II subunit RPB2 ...  1663   0.0  
gb|PAN45941.1| hypothetical protein PAHAL_I02415 [Panicum hallii]    1661   0.0  
ref|XP_004982316.1| DNA-directed RNA polymerase II subunit RPB2 ...  1661   0.0  
ref|XP_020199539.1| DNA-directed RNA polymerase II subunit RPB2 ...  1659   0.0  
gb|PIA55355.1| hypothetical protein AQUCO_00800242v1 [Aquilegia ...  1656   0.0  

>ref|XP_018684753.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
            acuminata subsp. malaccensis]
          Length = 1184

 Score = 1697 bits (4395), Expect = 0.0
 Identities = 834/862 (96%), Positives = 844/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 306  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 365

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCA+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 366  GYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 425

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 426  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 485

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE
Sbjct: 486  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 545

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNP++LVKTLRQLRRQIDVNTEVGVIRDI
Sbjct: 546  EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDI 605

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIR LQQRETPEEGWHDLV+KGF      
Sbjct: 606  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFIEYIDT 665

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 666  EEEETTMISMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 725

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 726  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 785

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG
Sbjct: 786  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 845

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SY+KLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQA+RYTRRDHSTSLRHSESGMVD
Sbjct: 846  SYEKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQASRYTRRDHSTSLRHSESGMVD 905

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 906  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 965

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 966  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1025

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1026 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1085

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1086 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1145

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1146 VQVHIPYACKLLFQELMAMAIA 1167


>ref|XP_010920288.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB2 [Elaeis guineensis]
          Length = 1187

 Score = 1682 bits (4355), Expect = 0.0
 Identities = 825/862 (95%), Positives = 841/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 307  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 366

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 367  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 426

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 427  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 486

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE
Sbjct: 487  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 546

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ++KIFVNG WVGIHRNP++LV+TLR+LRRQIDVNTEVGV+RDI
Sbjct: 547  EWGTENFEEISPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDI 606

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKKKDI+ LQQRE+PEEGWHDLVAKGF      
Sbjct: 607  RLKELRLYTDYGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFIEYIDT 666

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 667  EEEETTMIAMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 726

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 727  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 786

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG
Sbjct: 787  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 846

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDD+QGQA+RYTRRDHSTS+RHSESGMVD
Sbjct: 847  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVD 906

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 907  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 966

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 967  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1026

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1027 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1086

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1087 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 1146

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1147 VQVHIPYACKLLFQELMAMAIA 1168


>ref|XP_020578945.1| DNA-directed RNA polymerase II subunit RPB2 [Phalaenopsis equestris]
          Length = 1187

 Score = 1680 bits (4351), Expect = 0.0
 Identities = 826/862 (95%), Positives = 838/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG+GEYCETKKAYYF
Sbjct: 307  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYF 366

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 367  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 426

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 427  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 486

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE
Sbjct: 487  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 546

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNP++LVKTLRQLRRQIDVNTEVGVIRDI
Sbjct: 547  EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDI 606

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI  LQQRETPEEGWHDLVAKGF      
Sbjct: 607  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIIALQQRETPEEGWHDLVAKGFIEYIDT 666

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVN RQNPE AY+ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 667  EEEETTMISMTINDLVNGRQNPEGAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 726

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 
Sbjct: 727  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIT 786

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 787  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 846

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPI QD+AQG A+RYT+RDHSTSLRHSESGMVD
Sbjct: 847  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDEAQGAASRYTQRDHSTSLRHSESGMVD 906

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 907  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 966

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 967  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1026

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1027 TMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1086

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1087 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 1146

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELM+MAIA
Sbjct: 1147 VQVHIPYACKLLFQELMSMAIA 1168


>ref|XP_008801262.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix
            dactylifera]
          Length = 1187

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 821/862 (95%), Positives = 839/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 307  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 366

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 367  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 426

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAG RAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 427  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSHLRRLN 486

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE
Sbjct: 487  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 546

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ++KIFVNG WVGIHRNP++LV+TLR+LRRQIDVNTEVGV+RDI
Sbjct: 547  EWGTENFEEISPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDI 606

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKK+ I+ LQQRE+PEEGWHDLVAKGF      
Sbjct: 607  RLKELRLYTDYGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFIEYIDT 666

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 667  EEEETTMIAMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 726

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 727  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 786

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG
Sbjct: 787  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 846

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDD+QGQA+RYTRRDHSTS+RHSESGMVD
Sbjct: 847  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVD 906

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 907  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 966

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 967  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1026

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1027 TMYNGHTGRKLTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1086

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1087 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 1146

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1147 VQVHIPYACKLLFQELMAMAIA 1168


>ref|XP_015690688.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
            [Oryza brachyantha]
 ref|XP_015690689.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X3
            [Oryza brachyantha]
          Length = 1219

 Score = 1674 bits (4335), Expect = 0.0
 Identities = 822/862 (95%), Positives = 837/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 341  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 400

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 401  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 460

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 461  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 520

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 521  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 580

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 581  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 640

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKKK IR LQQRETPEEGWHDLVAKGF      
Sbjct: 641  RLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDT 700

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 701  EEEETTMISMTINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 760

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 761  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 820

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 821  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 880

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYT+RDHSTSLRHSESGMVD
Sbjct: 881  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVD 940

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 941  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1000

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1001 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1060

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1061 TMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1120

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1121 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1180

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1181 VQVHIPYACKLLFQELMAMAIA 1202


>ref|XP_006650345.2| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
            [Oryza brachyantha]
          Length = 1254

 Score = 1674 bits (4335), Expect = 0.0
 Identities = 822/862 (95%), Positives = 837/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 376  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 435

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 436  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 495

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 496  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 555

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 556  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 615

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 616  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 675

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKKK IR LQQRETPEEGWHDLVAKGF      
Sbjct: 676  RLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDT 735

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 736  EEEETTMISMTINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 795

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 796  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 855

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 856  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 915

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYT+RDHSTSLRHSESGMVD
Sbjct: 916  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVD 975

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 976  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1035

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1036 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1095

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1096 TMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1155

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1156 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1215

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1216 VQVHIPYACKLLFQELMAMAIA 1237


>ref|XP_020677799.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
 gb|PKU84997.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
          Length = 1186

 Score = 1672 bits (4331), Expect = 0.0
 Identities = 822/862 (95%), Positives = 836/862 (96%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 307  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 366

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 367  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 426

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 427  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 486

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE
Sbjct: 487  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 546

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+TKIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGVIRDI
Sbjct: 547  EWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRKLRRQIDVNTEVGVIRDI 606

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI  LQQRETPEEGWHDLVAKGF      
Sbjct: 607  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIISLQQRETPEEGWHDLVAKGFIEYIDT 666

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVN RQNPE+AY+ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 667  EEEETTMISMTINDLVNGRQNPEDAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 726

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 
Sbjct: 727  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIT 786

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 787  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 846

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPI QD+AQG A+RYT+RDHSTSLRHSESGMVD
Sbjct: 847  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDEAQGAASRYTQRDHSTSLRHSESGMVD 906

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 907  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 966

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 967  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1026

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1027 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1086

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKNS ECRGCKNKTDI
Sbjct: 1087 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEICGLIAIANLKKNSVECRGCKNKTDI 1146

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELM+MAIA
Sbjct: 1147 VQVHIPYACKLLFQELMSMAIA 1168


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera]
 emb|CAN72948.1| hypothetical protein VITISV_033708 [Vitis vinifera]
 emb|CBI21848.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1193

 Score = 1672 bits (4331), Expect = 0.0
 Identities = 823/863 (95%), Positives = 840/863 (97%), Gaps = 1/863 (0%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 312  EEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 371

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDN
Sbjct: 372  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDN 431

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 432  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLN 491

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 492  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 551

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNP++LVKTLRQLRRQ+DVNTEVGVIRDI
Sbjct: 552  EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDI 611

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEG-WHDLVAKGFXXXXX 1512
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKK+DIR LQ RE+PE+G WHDLV+KGF     
Sbjct: 612  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVD 671

Query: 1511 XXXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 1332
                        INDL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 672  TEEEETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 731

Query: 1331 TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 1152
            TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 732  TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 791

Query: 1151 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH 972
            ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH
Sbjct: 792  ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH 851

Query: 971  GSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMV 792
            GSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI QDD+QGQA+RYTRRDHSTSLRHSESGMV
Sbjct: 852  GSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHSESGMV 911

Query: 791  DQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD 612
            DQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD
Sbjct: 912  DQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD 971

Query: 611  IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 432
            IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF
Sbjct: 972  IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 1031

Query: 431  ETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 252
            ETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR
Sbjct: 1032 ETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 1091

Query: 251  FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD 72
            FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD
Sbjct: 1092 FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD 1151

Query: 71   IVQVHIPYACKLLFQELMAMAIA 3
            IVQVHIPYACKLLFQELMAMAIA
Sbjct: 1152 IVQVHIPYACKLLFQELMAMAIA 1174


>gb|PKA65122.1| DNA-directed RNA polymerase II subunit RPB2 [Apostasia shenzhenica]
          Length = 1187

 Score = 1672 bits (4330), Expect = 0.0
 Identities = 820/862 (95%), Positives = 837/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAK+ILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 307  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKDILQKEMLPHVGVGEYCETKKAYYF 366

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFR LTRDVRSYVQKCVDN
Sbjct: 367  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRNLTRDVRSYVQKCVDN 426

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWG+ANQAGTR+GVSQVLNRLTYASTLSHLRRLN
Sbjct: 427  GKDVNLQFAIKAKTITSGLKYSLATGNWGRANQAGTRSGVSQVLNRLTYASTLSHLRRLN 486

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE
Sbjct: 487  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 546

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNP++LVKTLRQLRRQIDVNTEVGVIRDI
Sbjct: 547  EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDI 606

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKK+DIR LQQRETPEEGWH+LVAKGF      
Sbjct: 607  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEGWHELVAKGFIEYIDT 666

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNARQNPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 667  EEEETTMISMTINDLVNARQNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 726

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 727  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 786

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSY+DEEKKMGTLVKE+FG PNRENTMGMRHG
Sbjct: 787  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYKDEEKKMGTLVKEEFGCPNRENTMGMRHG 846

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGL PPGTRVSGEDV+IGKTSPI QDD QG A+RYT RDHSTSLRHSESGMVD
Sbjct: 847  SYDKLDDDGLTPPGTRVSGEDVLIGKTSPISQDDNQGAASRYTHRDHSTSLRHSESGMVD 906

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 907  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 966

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 967  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1026

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1027 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1086

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1087 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 1146

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1147 VQVHIPYACKLLFQELMAMAIA 1168


>ref|XP_020094305.1| DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
 gb|OAY64594.1| DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
          Length = 1187

 Score = 1671 bits (4328), Expect = 0.0
 Identities = 818/862 (94%), Positives = 838/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 309  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 368

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCA+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 369  GYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 428

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKT+TSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 429  GKEVNLQFAIKAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 488

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 489  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 548

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LV+TLR+LRRQIDVNTEVGV+RDI
Sbjct: 549  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDI 608

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKKKDIR LQQRE+PEEGWHDLVAKGF      
Sbjct: 609  RLKELRLYTDYGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDT 668

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLVNARQNP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 669  EEEETTMISMTINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 728

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 729  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 788

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG
Sbjct: 789  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 848

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPI QDD+QGQA+RYTRRDHST LRHSESGMVD
Sbjct: 849  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPISQDDSQGQASRYTRRDHSTCLRHSESGMVD 908

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 909  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 968

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 969  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1028

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1029 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1088

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1089 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1148

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1149 VQVHIPYACKLLFQELMAMAIA 1170


>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
          Length = 1218

 Score = 1668 bits (4319), Expect = 0.0
 Identities = 817/862 (94%), Positives = 836/862 (96%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 340  EEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 399

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 400  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 459

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 460  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 519

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 520  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 579

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 580  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 639

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKK+ IR LQQRETPEEGWHDLVAKGF      
Sbjct: 640  RLKELRLYTDYGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDT 699

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDL+ AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 700  EEEETTMISMTINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 759

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 760  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 819

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 820  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 879

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYT+RDHSTSLRHSESGMVD
Sbjct: 880  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVD 939

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 940  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 999

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1000 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1059

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1060 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1119

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1120 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1179

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1180 VQVHIPYACKLLFQELMAMAIA 1201


>ref|XP_015631661.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa
            Japonica Group]
 gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative,
            expressed [Oryza sativa Japonica Group]
 gb|EAY91202.1| hypothetical protein OsI_12811 [Oryza sativa Indica Group]
          Length = 1222

 Score = 1668 bits (4319), Expect = 0.0
 Identities = 817/862 (94%), Positives = 836/862 (96%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 344  EEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 403

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 404  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 463

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 464  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 523

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 524  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 583

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 584  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 643

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKK+ IR LQQRETPEEGWHDLVAKGF      
Sbjct: 644  RLKELRLYTDYGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDT 703

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDL+ AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 704  EEEETTMISMTINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 763

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 764  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 823

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 824  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 883

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYT+RDHSTSLRHSESGMVD
Sbjct: 884  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVD 943

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 944  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1003

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1004 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1063

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1064 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1123

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1124 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1183

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1184 VQVHIPYACKLLFQELMAMAIA 1205


>ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
            nucifera]
          Length = 1189

 Score = 1667 bits (4317), Expect = 0.0
 Identities = 822/863 (95%), Positives = 838/863 (97%), Gaps = 1/863 (0%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 308  EEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 367

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDN
Sbjct: 368  GYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDN 427

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 428  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLN 487

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 488  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 547

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNPE+LVKTLRQLRRQ+DVNTEVGVIRDI
Sbjct: 548  EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDI 607

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEG-WHDLVAKGFXXXXX 1512
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIR LQQRE+ EEG WHDLVAKGF     
Sbjct: 608  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIEYVD 667

Query: 1511 XXXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 1332
                        INDLV AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 668  TEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 727

Query: 1331 TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 1152
            TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 728  TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 787

Query: 1151 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH 972
            ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+RENTMGMRH
Sbjct: 788  ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRH 847

Query: 971  GSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMV 792
            GSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI QDD+QGQ++RYTRRDHSTSLRHSESGMV
Sbjct: 848  GSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLRHSESGMV 907

Query: 791  DQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD 612
            DQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD
Sbjct: 908  DQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD 967

Query: 611  IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 432
            IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF
Sbjct: 968  IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 1027

Query: 431  ETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 252
            ETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR
Sbjct: 1028 ETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 1087

Query: 251  FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD 72
            FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD
Sbjct: 1088 FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD 1147

Query: 71   IVQVHIPYACKLLFQELMAMAIA 3
            IVQVHIPYACKLLFQELM+MAIA
Sbjct: 1148 IVQVHIPYACKLLFQELMSMAIA 1170


>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Brachypodium
            distachyon]
 gb|KQK13978.1| hypothetical protein BRADI_1g13720v3 [Brachypodium distachyon]
          Length = 1228

 Score = 1667 bits (4316), Expect = 0.0
 Identities = 817/862 (94%), Positives = 837/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 350  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 409

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 410  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 469

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 470  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 529

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 530  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 589

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 590  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 649

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIV+ QRLLIKKK IR LQQRETP+EGWHDLVAKGF      
Sbjct: 650  RLKELRLYTDYGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDT 709

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDLV+AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 710  EEEETTMISMTINDLVSARNNPQEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 769

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 770  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 829

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 830  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 889

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRY++RDHSTSLRHSESGMVD
Sbjct: 890  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVD 949

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 950  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1009

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1010 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1069

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1070 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1129

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1130 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1189

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1190 VQVHIPYACKLLFQELMAMAIA 1211


>ref|XP_020532114.1| DNA-directed RNA polymerase II subunit RPB2 isoform X2 [Amborella
            trichopoda]
          Length = 1035

 Score = 1663 bits (4307), Expect = 0.0
 Identities = 815/862 (94%), Positives = 837/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 151  EEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 210

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSYVQKCVDN
Sbjct: 211  GYIIHRLLVCALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDN 270

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLN
Sbjct: 271  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLN 330

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 331  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 390

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNPE+LVKTLRQLRRQ+DVNTEVGVIRDI
Sbjct: 391  EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDI 450

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKK DIR LQQRE+P+EGWHDLVAKGF      
Sbjct: 451  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDT 510

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       I+DLV+AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 511  EEEETTMISMTISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 570

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+
Sbjct: 571  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIS 630

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG
Sbjct: 631  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 690

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKT+PI Q++ QGQA+RYTRRDHSTSLRHSESGMVD
Sbjct: 691  SYDKLDDDGLAPPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVD 750

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 751  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 810

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 811  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 870

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 871  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 930

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 931  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDI 990

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            +QVHIPYACKLLFQELMAMAIA
Sbjct: 991  IQVHIPYACKLLFQELMAMAIA 1012


>ref|XP_006859038.1| DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Amborella
            trichopoda]
 gb|ERN20505.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score = 1663 bits (4307), Expect = 0.0
 Identities = 815/862 (94%), Positives = 837/862 (97%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 306  EEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 365

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSYVQKCVDN
Sbjct: 366  GYIIHRLLVCALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDN 425

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLN
Sbjct: 426  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLN 485

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 486  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 545

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNPE+LVKTLRQLRRQ+DVNTEVGVIRDI
Sbjct: 546  EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDI 605

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKK DIR LQQRE+P+EGWHDLVAKGF      
Sbjct: 606  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDT 665

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       I+DLV+AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 666  EEEETTMISMTISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 725

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+
Sbjct: 726  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIS 785

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG
Sbjct: 786  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 845

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKT+PI Q++ QGQA+RYTRRDHSTSLRHSESGMVD
Sbjct: 846  SYDKLDDDGLAPPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVD 905

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI
Sbjct: 906  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 965

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 966  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1025

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1026 TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1085

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1086 GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDI 1145

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            +QVHIPYACKLLFQELMAMAIA
Sbjct: 1146 IQVHIPYACKLLFQELMAMAIA 1167


>gb|PAN45941.1| hypothetical protein PAHAL_I02415 [Panicum hallii]
          Length = 1230

 Score = 1661 bits (4301), Expect = 0.0
 Identities = 813/862 (94%), Positives = 836/862 (96%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 352  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 411

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 412  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 471

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 472  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 531

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 532  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 591

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRN ++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 592  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNADLLVKTLRRLRRQIDVNTEVGVVRDI 651

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKK  IR LQQRETP+EGWH+LV+KG+      
Sbjct: 652  RLKELRLYTDYGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDT 711

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDL+NARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 712  EEEETTMISMTINDLINARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 771

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 772  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 831

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 832  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 891

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQA+RY++RDHSTSLRHSESGMVD
Sbjct: 892  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHSESGMVD 951

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 952  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1011

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1012 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1071

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1072 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1131

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1132 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1191

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1192 VQVHIPYACKLLFQELMAMAIA 1213


>ref|XP_004982316.1| DNA-directed RNA polymerase II subunit RPB2 [Setaria italica]
 gb|KQK87931.1| hypothetical protein SETIT_033950mg [Setaria italica]
          Length = 1226

 Score = 1661 bits (4301), Expect = 0.0
 Identities = 812/862 (94%), Positives = 836/862 (96%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 348  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 407

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 408  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 467

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 468  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 527

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 528  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 587

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 588  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 647

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKK  IR LQQRETP+EGWH+LV+KG+      
Sbjct: 648  RLKELRLYTDYGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDT 707

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       INDL+NAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 708  EEEETTMISMTINDLINARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 767

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+
Sbjct: 768  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIS 827

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 828  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 887

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQA+RY++RDHSTSLRHSESGMVD
Sbjct: 888  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHSESGMVD 947

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 948  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1007

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1008 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1067

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1068 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1127

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1128 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1187

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1188 VQVHIPYACKLLFQELMAMAIA 1209


>ref|XP_020199539.1| DNA-directed RNA polymerase II subunit RPB2 [Aegilops tauschii subsp.
            tauschii]
          Length = 1221

 Score = 1659 bits (4297), Expect = 0.0
 Identities = 814/862 (94%), Positives = 833/862 (96%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+CETKKAYYF
Sbjct: 344  EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYF 403

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN
Sbjct: 404  GYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 463

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 464  GKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 523

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 524  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 583

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EW TENFEEISPAVIPQ+ KIFVNGCWVGIHRNP++LVKTLR+LRRQIDVNTEVGV+RDI
Sbjct: 584  EWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDI 643

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEEGWHDLVAKGFXXXXXX 1509
            RLKELRLYTDYGRCSRPLFIVE QRLLIKKK IR LQQRETP+EGWHDLVAKGF      
Sbjct: 644  RLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDT 703

Query: 1508 XXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1329
                       I DL  +R NP EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 704  EEEETTMISMTIRDLETSRHNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 763

Query: 1328 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 1149
            YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 764  YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 823

Query: 1148 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 969
            CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHG
Sbjct: 824  CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHG 883

Query: 968  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMVD 789
            SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRY++RDHSTSLRHSESGMVD
Sbjct: 884  SYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVD 943

Query: 788  QVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDI 609
            QVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDI
Sbjct: 944  QVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDI 1003

Query: 608  IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 429
            IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE
Sbjct: 1004 IVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFE 1063

Query: 428  TMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 249
            TMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF
Sbjct: 1064 TMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRF 1123

Query: 248  GEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDI 69
            GEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI
Sbjct: 1124 GEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDI 1183

Query: 68   VQVHIPYACKLLFQELMAMAIA 3
            VQVHIPYACKLLFQELMAMAIA
Sbjct: 1184 VQVHIPYACKLLFQELMAMAIA 1205


>gb|PIA55355.1| hypothetical protein AQUCO_00800242v1 [Aquilegia coerulea]
          Length = 1208

 Score = 1656 bits (4289), Expect = 0.0
 Identities = 816/863 (94%), Positives = 834/863 (96%), Gaps = 1/863 (0%)
 Frame = -2

Query: 2588 EEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 2409
            EEAFVIQN+QVALDYIGKRG+TVGVTREKRIKYAKEIL+KEMLPHVGVGE+CETKKAYYF
Sbjct: 330  EEAFVIQNKQVALDYIGKRGSTVGVTREKRIKYAKEILEKEMLPHVGVGEHCETKKAYYF 389

Query: 2408 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDN 2229
            GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y QKCVDN
Sbjct: 390  GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYAQKCVDN 449

Query: 2228 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLN 2049
            GKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLN
Sbjct: 450  GKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLN 509

Query: 2048 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLE 1869
            SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLE
Sbjct: 510  SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 569

Query: 1868 EWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPEMLVKTLRQLRRQIDVNTEVGVIRDI 1689
            EWSTENFEEISP VIPQ+TKIFVNGCWVGIHRNPE+LV+TLRQLRRQ+DVNTEVGVIRDI
Sbjct: 570  EWSTENFEEISPGVIPQATKIFVNGCWVGIHRNPELLVRTLRQLRRQVDVNTEVGVIRDI 629

Query: 1688 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRQLQQRETPEE-GWHDLVAKGFXXXXX 1512
            RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIR LQQRE+ EE GWHDLV KG+     
Sbjct: 630  RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESTEEIGWHDLVQKGYIEYVD 689

Query: 1511 XXXXXXXXXXXXINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 1332
                        INDLV AR NP EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 690  TEEEETTMISMTINDLVTARLNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 749

Query: 1331 TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 1152
            TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 750  TYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 809

Query: 1151 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH 972
            ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH
Sbjct: 810  ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRH 869

Query: 971  GSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTRRDHSTSLRHSESGMV 792
            GSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI QD++QG A+RYTRRDHSTSLRHSESGMV
Sbjct: 870  GSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDESQGIASRYTRRDHSTSLRHSESGMV 929

Query: 791  DQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD 612
            DQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD
Sbjct: 930  DQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPD 989

Query: 611  IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 432
            IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF
Sbjct: 990  IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 1049

Query: 431  ETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 252
            ETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR
Sbjct: 1050 ETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 1109

Query: 251  FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD 72
            FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD
Sbjct: 1110 FGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTD 1169

Query: 71   IVQVHIPYACKLLFQELMAMAIA 3
            IVQVHIPYACKLLFQELMAMAIA
Sbjct: 1170 IVQVHIPYACKLLFQELMAMAIA 1192