BLASTX nr result

ID: Cheilocostus21_contig00011526 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00011526
         (577 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009383469.1| PREDICTED: nuclear cap-binding protein subun...    62   4e-08
dbj|GAY65469.1| hypothetical protein CUMW_241310 [Citrus unshiu]       57   2e-06
ref|XP_015874363.1| PREDICTED: nuclear cap-binding protein subun...    56   6e-06

>ref|XP_009383469.1| PREDICTED: nuclear cap-binding protein subunit 2 [Musa acuminata
           subsp. malaccensis]
          Length = 250

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = -1

Query: 577 VQRELEAQRELVDYGADALGSFQPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATE 398
           VQRELE+QRELVDYGA AL +FQP                                SA+E
Sbjct: 147 VQRELESQRELVDYGAGALSAFQPPMPYGRHGGDYGHGGSHRHGRDYRKRNREDEHSASE 206

Query: 397 AS-RPAGYDSTKATDPDSRPEKNP 329
            S R +GY+S +++D DSRPEKNP
Sbjct: 207 MSRRTSGYESRRSSDHDSRPEKNP 230


>dbj|GAY65469.1| hypothetical protein CUMW_241310 [Citrus unshiu]
          Length = 259

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = -1

Query: 577 VQRELEAQRELVDYGADALGSFQPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATE 398
           VQRELEAQR+LVDYG  +L SFQP                               R A E
Sbjct: 156 VQRELEAQRQLVDYGTGSLNSFQPMVDMVEATDMGALIGMAEKTDYQRKRHREDDRHAHE 215

Query: 397 AS-RPAGYDSTKATDPDSRPEKNP 329
            S R A ++S + +DPDSRPEKNP
Sbjct: 216 TSKRSADFESRRNSDPDSRPEKNP 239


>ref|XP_015874363.1| PREDICTED: nuclear cap-binding protein subunit 2 [Ziziphus jujuba]
          Length = 253

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/87 (41%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = -1

Query: 577 VQRELEAQRELVDYGADALGSFQPAP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 410
           VQRELEAQR+LVDYGA +LGSF P                                    
Sbjct: 147 VQRELEAQRQLVDYGAGSLGSFPPVMPPQYGRRGGSHSHGGSHRHGRDYHRKRHRDDDRH 206

Query: 409 SATEASRPAGYDSTKATDPDSRPEKNP 329
           S   + R +G+DS K TD DSRPEKNP
Sbjct: 207 SYEASKRNSGHDSRKNTDHDSRPEKNP 233


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