BLASTX nr result
ID: Cheilocostus21_contig00011478
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00011478
(740 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018675322.1| PREDICTED: probable NOT transcription comple... 146 1e-36
ref|XP_009420232.1| PREDICTED: probable NOT transcription comple... 146 1e-36
ref|XP_009416331.1| PREDICTED: probable NOT transcription comple... 142 4e-35
ref|XP_017697085.1| PREDICTED: LOW QUALITY PROTEIN: probable NOT... 125 3e-29
ref|XP_008793379.1| PREDICTED: probable NOT transcription comple... 122 4e-28
ref|XP_010938109.1| PREDICTED: probable NOT transcription comple... 120 3e-27
ref|XP_010921271.1| PREDICTED: probable NOT transcription comple... 118 1e-26
ref|XP_010938104.1| PREDICTED: probable NOT transcription comple... 118 1e-26
ref|XP_010921270.1| PREDICTED: probable NOT transcription comple... 117 3e-26
ref|XP_010921269.1| PREDICTED: probable NOT transcription comple... 117 3e-26
ref|XP_019705916.1| PREDICTED: probable NOT transcription comple... 114 2e-25
gb|KJB83806.1| hypothetical protein B456_013G265700 [Gossypium r... 110 4e-24
ref|XP_016718962.1| PREDICTED: probable NOT transcription comple... 110 4e-24
ref|XP_012463264.1| PREDICTED: probable NOT transcription comple... 110 4e-24
ref|XP_016718887.1| PREDICTED: probable NOT transcription comple... 110 5e-24
ref|XP_012463263.1| PREDICTED: probable NOT transcription comple... 110 5e-24
ref|XP_016718816.1| PREDICTED: probable NOT transcription comple... 110 5e-24
ref|XP_012463262.1| PREDICTED: probable NOT transcription comple... 110 5e-24
ref|XP_017645996.1| PREDICTED: probable NOT transcription comple... 110 8e-24
ref|XP_017645995.1| PREDICTED: probable NOT transcription comple... 110 9e-24
>ref|XP_018675322.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Musa acuminata subsp. malaccensis]
ref|XP_018675323.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 678
Score = 146 bits (369), Expect = 1e-36
Identities = 93/182 (51%), Positives = 102/182 (56%), Gaps = 21/182 (11%)
Frame = +1
Query: 190 TSGIEF-LCSCEKDIMSGLLNTNHNGSQSNLTDSAGRPYT-SFSGQSTT-PGFHHSGXXX 360
TSGIE L + K IMSGLLN+ NGS SNLTDS GRPYT SFS QS T PGFH+S
Sbjct: 4 TSGIESSLNTYHKTIMSGLLNSTLNGSSSNLTDSTGRPYTTSFSSQSATIPGFHNSSGLQ 63
Query: 361 XXXXXXXXXXXXXXXXXXX------------------GNLPSGRFASNNLLVALSQMSHG 486
G++PSGRFASNNLLVALSQMSHG
Sbjct: 64 GLHNIHGSFNLPNMPGSLVSRNAAISGVPSGGVPQPGGSIPSGRFASNNLLVALSQMSHG 123
Query: 487 TGVSNRGGINVVGNHXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLT 666
+GV+NRGGINVVGNH RS++PGLGVSPVLGNVGPRL
Sbjct: 124 SGVTNRGGINVVGNHAFSSNMSGVGGSITGLSSSSATGNRSAVPGLGVSPVLGNVGPRLA 183
Query: 667 ST 672
ST
Sbjct: 184 ST 185
>ref|XP_009420232.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009420233.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009420234.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 679
Score = 146 bits (369), Expect = 1e-36
Identities = 93/182 (51%), Positives = 102/182 (56%), Gaps = 21/182 (11%)
Frame = +1
Query: 190 TSGIEF-LCSCEKDIMSGLLNTNHNGSQSNLTDSAGRPYT-SFSGQSTT-PGFHHSGXXX 360
TSGIE L + K IMSGLLN+ NGS SNLTDS GRPYT SFS QS T PGFH+S
Sbjct: 4 TSGIESSLNTYHKTIMSGLLNSTLNGSSSNLTDSTGRPYTTSFSSQSATIPGFHNSSGLQ 63
Query: 361 XXXXXXXXXXXXXXXXXXX------------------GNLPSGRFASNNLLVALSQMSHG 486
G++PSGRFASNNLLVALSQMSHG
Sbjct: 64 GLHNIHGSFNLPNMPGSLVSRNAAISGVPSGGVPQPGGSIPSGRFASNNLLVALSQMSHG 123
Query: 487 TGVSNRGGINVVGNHXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLT 666
+GV+NRGGINVVGNH RS++PGLGVSPVLGNVGPRL
Sbjct: 124 SGVTNRGGINVVGNHAFSSNMSGVGGSITGLSSSSATGNRSAVPGLGVSPVLGNVGPRLA 183
Query: 667 ST 672
ST
Sbjct: 184 ST 185
>ref|XP_009416331.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009416333.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 657
Score = 142 bits (358), Expect = 4e-35
Identities = 85/167 (50%), Positives = 94/167 (56%), Gaps = 20/167 (11%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYT-SFSGQSTT-PGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLNT NGS SN+ DS GRPYT SFS QS + PGFHHSG
Sbjct: 1 MSGLLNTTLNGSASNIPDSTGRPYTTSFSAQSASNPGFHHSGGLQGLHNIHGSFNLPNMP 60
Query: 406 XXXX------------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGNH 531
GN+PSGRFASNNLLVALSQMSHG+GV+NRGGINVVGNH
Sbjct: 61 GSLASRNAVMGGVPSGSVQQPGGNIPSGRFASNNLLVALSQMSHGSGVTNRGGINVVGNH 120
Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
R+S+PGLGVSPVLGNVGPRLT++
Sbjct: 121 AFSSSMNGVGGSITGISSNSATGNRNSVPGLGVSPVLGNVGPRLTNS 167
>ref|XP_017697085.1| PREDICTED: LOW QUALITY PROTEIN: probable NOT transcription complex
subunit VIP2 [Phoenix dactylifera]
Length = 662
Score = 125 bits (315), Expect = 3e-29
Identities = 79/168 (47%), Positives = 92/168 (54%), Gaps = 21/168 (12%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS GRP+TS FS QS TTPGFHHSG
Sbjct: 1 MSGLLNSTLNGSTSNLPDSTGRPFTSSFSAQSATTPGFHHSGGLQGLHNIHGSFNIPNMA 60
Query: 406 XXXX------------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN- 528
GN+ SGRFASNN+ VALSQ+SHG+GV+NRGGIN+VG+
Sbjct: 61 SSLASRNAAMSGVPSSGVQQPGGNISSGRFASNNIPVALSQISHGSGVTNRGGINIVGSP 120
Query: 529 HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
RSS+PGLGVSP+LGNVGPR+TS+
Sbjct: 121 AFSSSMSGVGGSIPGISSSSATAGNRSSVPGLGVSPILGNVGPRITSS 168
>ref|XP_008793379.1| PREDICTED: probable NOT transcription complex subunit VIP2 [Phoenix
dactylifera]
Length = 660
Score = 122 bits (306), Expect = 4e-28
Identities = 77/168 (45%), Positives = 92/168 (54%), Gaps = 21/168 (12%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS GRP+TS FS QS T+PGFHHSG
Sbjct: 1 MSGLLNSTLNGSTSNLPDSTGRPFTSSFSAQSATSPGFHHSGGLQGLHNIHGNFNIPNMP 60
Query: 406 XXXX------------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN- 528
GN+ SGRFASNN+ VALSQ+SHG+G++NRGGINVVG+
Sbjct: 61 SSLASRNAAMTGVPSSGVQQPGGNISSGRFASNNIPVALSQISHGSGITNRGGINVVGSP 120
Query: 529 HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
RSS+PGLGVSP+LG+VGPR+TS+
Sbjct: 121 AFSSSMNGVGGSIPGIPSSSAAAGNRSSVPGLGVSPILGSVGPRITSS 168
>ref|XP_010938109.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Elaeis guineensis]
Length = 659
Score = 120 bits (300), Expect = 3e-27
Identities = 76/164 (46%), Positives = 91/164 (55%), Gaps = 17/164 (10%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS+GRP+TS FS QS T+PGFHHSG
Sbjct: 1 MSGLLNSTLNGSASNLPDSSGRPFTSSFSAQSATSPGFHHSGLHNIHGSFNIPNMPSSLA 60
Query: 406 XXXX--------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN-HXXX 540
GN+ SGRFASNN+ VALSQ+SHG+GV+NRGGINVVG+
Sbjct: 61 SRNAAMSGVPSSGVQQPGGNISSGRFASNNIPVALSQISHGSGVTNRGGINVVGSPAFSS 120
Query: 541 XXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
R S+PGLGVSP+LG+VG R+TS+
Sbjct: 121 SMNGVGGSIPGISSSSATAGNRGSVPGLGVSPILGSVGSRITSS 164
>ref|XP_010921271.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Elaeis guineensis]
Length = 657
Score = 118 bits (296), Expect = 1e-26
Identities = 75/164 (45%), Positives = 89/164 (54%), Gaps = 17/164 (10%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS GRP+TS FS Q+ TTPGFHHSG
Sbjct: 1 MSGLLNSTLNGSTSNLPDSTGRPFTSSFSAQAATTPGFHHSGLHNIHGSFNIPNMPSSLA 60
Query: 406 XXXX--------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN-HXXX 540
GN+ GRF SN++ VALSQ+SHG+GVS+RG INVVG+
Sbjct: 61 SRNVAMSGVPSSGVQQPGGNISGGRFTSNSIPVALSQISHGSGVSSRGAINVVGSPAFSS 120
Query: 541 XXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
RSS+PGLGVSP+LGNVGPR+TS+
Sbjct: 121 SMSGVGGSIPGISSSSATAGNRSSVPGLGVSPILGNVGPRITSS 164
>ref|XP_010938104.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Elaeis guineensis]
ref|XP_010938105.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Elaeis guineensis]
Length = 663
Score = 118 bits (296), Expect = 1e-26
Identities = 76/168 (45%), Positives = 91/168 (54%), Gaps = 21/168 (12%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS+GRP+TS FS QS T+PGFHHSG
Sbjct: 1 MSGLLNSTLNGSASNLPDSSGRPFTSSFSAQSATSPGFHHSGGLQGLHNIHGSFNIPNMP 60
Query: 406 XXXX------------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN- 528
GN+ SGRFASNN+ VALSQ+SHG+GV+NRGGINVVG+
Sbjct: 61 SSLASRNAAMSGVPSSGVQQPGGNISSGRFASNNIPVALSQISHGSGVTNRGGINVVGSP 120
Query: 529 HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
R S+PGLGVSP+LG+VG R+TS+
Sbjct: 121 AFSSSMNGVGGSIPGISSSSATAGNRGSVPGLGVSPILGSVGSRITSS 168
>ref|XP_010921270.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Elaeis guineensis]
Length = 660
Score = 117 bits (292), Expect = 3e-26
Identities = 75/168 (44%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS GRP+TS FS Q+ TTPGFHHSG
Sbjct: 1 MSGLLNSTLNGSTSNLPDSTGRPFTSSFSAQAATTPGFHHSGGLQGLHNIHGSFNIPNMP 60
Query: 406 XXXX------------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN- 528
GN+ GRF SN++ VALSQ+SHG+GVS+RG INVVG+
Sbjct: 61 SSLASRNVAMSGVPSSGVQQPGGNISGGRFTSNSIPVALSQISHGSGVSSRGAINVVGSP 120
Query: 529 HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
RSS+PGLGVSP+LGNVGPR+TS+
Sbjct: 121 AFSSSMSGVGGSIPGISSSSATAGNRSSVPGLGVSPILGNVGPRITSS 168
>ref|XP_010921269.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
Length = 661
Score = 117 bits (292), Expect = 3e-26
Identities = 75/168 (44%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPYTS-FSGQS-TTPGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL DS GRP+TS FS Q+ TTPGFHHSG
Sbjct: 1 MSGLLNSTLNGSTSNLPDSTGRPFTSSFSAQAATTPGFHHSGGLQGLHNIHGSFNIPNMP 60
Query: 406 XXXX------------------GNLPSGRFASNNLLVALSQMSHGTGVSNRGGINVVGN- 528
GN+ GRF SN++ VALSQ+SHG+GVS+RG INVVG+
Sbjct: 61 SSLASRNVAMSGVPSSGVQQPGGNISGGRFTSNSIPVALSQISHGSGVSSRGAINVVGSP 120
Query: 529 HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
RSS+PGLGVSP+LGNVGPR+TS+
Sbjct: 121 AFSSSMSGVGGSIPGISSSSATAGNRSSVPGLGVSPILGNVGPRITSS 168
>ref|XP_019705916.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
ref|XP_019705917.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
ref|XP_019705918.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
ref|XP_019705919.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
ref|XP_019705920.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
ref|XP_019705921.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
Length = 655
Score = 114 bits (286), Expect = 2e-25
Identities = 73/165 (44%), Positives = 91/165 (55%), Gaps = 18/165 (10%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQSTT-PGFHHSGXXXXXXXXXXXXXXXXXX 405
MSGLLN+ NGS SNL+DS GRP+ TSFS QS T PGFHHSG
Sbjct: 1 MSGLLNSGLNGSASNLSDSIGRPFATSFSAQSATVPGFHHSGLHNIHGSFNVPNMPSSFA 60
Query: 406 XXXX--------------GNLPSGRFASNNLLVALSQMSHG-TGVSNRGGINVVGN-HXX 537
G++ SGRFASNN+ VA+SQ+SHG +GV+NRGGI+VVGN
Sbjct: 61 SRNAAMSGIPSSGVQQPGGSISSGRFASNNIPVAMSQLSHGQSGVTNRGGISVVGNLAFS 120
Query: 538 XXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
R+S+PG+GVSP+LGN+GPR+T +
Sbjct: 121 NSTNGVGGLVPGISSNLASAGNRNSVPGIGVSPILGNLGPRITGS 165
>gb|KJB83806.1| hypothetical protein B456_013G265700 [Gossypium raimondii]
Length = 611
Score = 110 bits (276), Expect = 4e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_016718962.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Gossypium hirsutum]
Length = 612
Score = 110 bits (276), Expect = 4e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVTNRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_012463264.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Gossypium raimondii]
Length = 612
Score = 110 bits (276), Expect = 4e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_016718887.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Gossypium hirsutum]
Length = 639
Score = 110 bits (276), Expect = 5e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVTNRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_012463263.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Gossypium raimondii]
gb|KJB83807.1| hypothetical protein B456_013G265700 [Gossypium raimondii]
Length = 639
Score = 110 bits (276), Expect = 5e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_016718816.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Gossypium hirsutum]
Length = 664
Score = 110 bits (276), Expect = 5e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVTNRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_012463262.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Gossypium raimondii]
gb|KJB83808.1| hypothetical protein B456_013G265700 [Gossypium raimondii]
Length = 664
Score = 110 bits (276), Expect = 5e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSS 174
>ref|XP_017645996.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Gossypium arboreum]
Length = 612
Score = 110 bits (274), Expect = 8e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVTNRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNSGPRITSS 174
>ref|XP_017645995.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Gossypium arboreum]
Length = 639
Score = 110 bits (274), Expect = 9e-24
Identities = 74/174 (42%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Frame = +1
Query: 232 MSGLLNTNHNGSQSNLTDSAGRPY-TSFSGQS--TTPGFHHSGXXXXXXXXXXXXXXXXX 402
MSGLLN++ NGS SN+ DS+GR + TSFSGQS +PGFHH+G
Sbjct: 1 MSGLLNSSVNGSASNIPDSSGRSFATSFSGQSGAASPGFHHTGTIQGLHGIHGSFNVPNM 60
Query: 403 XXXXX------------------GNLPSGRFASNNLLVALSQMSHG-----TGVSNRGGI 513
GNL GRFASNNL VALSQ+SHG +GV+NRGGI
Sbjct: 61 PGTLTSRNSTLSNVPTGGVQQPTGNLSGGRFASNNLPVALSQLSHGSSHGHSGVTNRGGI 120
Query: 514 NVVGN-HXXXXXXXXXXXXXXXXXXXXXXXXRSSIPGLGVSPVLGNVGPRLTST 672
+VVGN R+++PGLGVSP+LGN GPR+TS+
Sbjct: 121 SVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNSGPRITSS 174