BLASTX nr result
ID: Cheilocostus21_contig00011198
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00011198
(557 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009413743.1| PREDICTED: ribosome-binding factor PSRP1, ch... 142 4e-38
gb|OAY74691.1| Ribosome-binding factor PSRP1, chloroplastic [Ana... 129 4e-33
ref|XP_022141073.1| ribosome-binding factor PSRP1, chloroplastic... 128 8e-33
ref|XP_010666127.1| PREDICTED: ribosome-binding factor PSRP1, ch... 127 1e-32
ref|XP_020089220.1| ribosome-binding factor PSRP1, chloroplastic... 127 2e-32
ref|XP_008460813.1| PREDICTED: ribosome-binding factor PSRP1, ch... 125 9e-32
pdb|5X8R|YY Chain y, Structure Of The 30s Small Subunit Of Chlor... 122 3e-31
ref|XP_020261710.1| ribosome-binding factor PSRP1, chloroplastic... 124 4e-31
gb|ONK72725.1| uncharacterized protein A4U43_C04F22490 [Asparagu... 124 4e-31
ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, ch... 124 5e-31
ref|XP_021775053.1| ribosome-binding factor PSRP1, chloroplastic... 123 6e-31
ref|XP_023551717.1| ribosome-binding factor PSRP1, chloroplastic... 123 7e-31
ref|XP_022922607.1| ribosome-binding factor PSRP1, chloroplastic... 123 8e-31
gb|PKA46560.1| Ribosome-binding factor PSRP1, chloroplastic [Apo... 122 1e-30
ref|XP_021763081.1| ribosome-binding factor PSRP1, chloroplastic... 122 2e-30
ref|XP_021858263.1| ribosome-binding factor PSRP1, chloroplastic... 122 2e-30
sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PS... 122 2e-30
ref|XP_008347268.1| PREDICTED: ribosome-binding factor PSRP1, ch... 119 2e-30
ref|XP_016181343.1| ribosome-binding factor PSRP1, chloroplastic... 121 3e-30
ref|XP_010251453.1| PREDICTED: ribosome-binding factor PSRP1, ch... 122 3e-30
>ref|XP_009413743.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Musa
acuminata subsp. malaccensis]
Length = 297
Score = 142 bits (357), Expect = 4e-38
Identities = 72/97 (74%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
Frame = -2
Query: 544 EEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINILYKR 365
EEFAP E E L +IVRTKYFDMPPL+V+EAKEQLENVDHSFYAFRN+ETGEINILYKR
Sbjct: 202 EEFAPAEEDVERLGRIVRTKYFDMPPLTVDEAKEQLENVDHSFYAFRNDETGEINILYKR 261
Query: 364 KEGGYGLILPK-DGKVHNLAATTEHAREPAATERVSG 257
KEGGYGLI+PK DG+ +L ++E RE + TERVSG
Sbjct: 262 KEGGYGLIIPKDDGQARDLETSSERTRE-SITERVSG 297
>gb|OAY74691.1| Ribosome-binding factor PSRP1, chloroplastic [Ananas comosus]
Length = 313
Score = 129 bits (324), Expect = 4e-33
Identities = 70/104 (67%), Positives = 83/104 (79%), Gaps = 4/104 (3%)
Frame = -2
Query: 556 EEKDEEFAP--VAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEI 383
EE+ + AP V E EVLD++VRTKYFDMPPL+VEEA+EQLENVDH FYAFRNEETGEI
Sbjct: 212 EEEQDLAAPGLVEEDGEVLDKVVRTKYFDMPPLTVEEAREQLENVDHDFYAFRNEETGEI 271
Query: 382 NILYKRKEGGYGLILPK-DGKVHNLAATTEHAR-EPAATERVSG 257
NILYKRK+GGYGLI+PK DG+V + T E A+ E E++SG
Sbjct: 272 NILYKRKDGGYGLIIPKDDGQVQKI--TEEPAKEEKTVAEQLSG 313
>ref|XP_022141073.1| ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]
Length = 310
Score = 128 bits (322), Expect = 8e-33
Identities = 63/98 (64%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Frame = -2
Query: 556 EEKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINI 377
+E++EE + + EV+D+IVRTKYFDMPPL+VEEA EQL+N+DH FY FRNEETGEINI
Sbjct: 213 DEEEEEEVSLEDSGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINI 272
Query: 376 LYKRKEGGYGLILPKD-GKVHNL-AATTEHAREPAATE 269
LYKRK+GGYGLI+PK+ G+ L T E AREP+ E
Sbjct: 273 LYKRKDGGYGLIIPKENGRAEKLEPVTVEPAREPSLAE 310
>ref|XP_010666127.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Beta
vulgaris subsp. vulgaris]
gb|KMS96293.1| hypothetical protein BVRB_000070 [Beta vulgaris subsp. vulgaris]
Length = 300
Score = 127 bits (320), Expect = 1e-32
Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Frame = -2
Query: 553 EKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINIL 374
E++ E APV E +++IVRTKYFDMPPL++ EA EQLENVDH FYAFRNEETGEINIL
Sbjct: 206 EEEVEAAPVPV-EEDIEEIVRTKYFDMPPLTLNEAVEQLENVDHDFYAFRNEETGEINIL 264
Query: 373 YKRKEGGYGLILPKDGKVHNL-AATTEHAREPAATE 269
YKRKEGGYGLI+PKDGK L +H REP+ E
Sbjct: 265 YKRKEGGYGLIIPKDGKTEKLEPLEVQHDREPSYAE 300
>ref|XP_020089220.1| ribosome-binding factor PSRP1, chloroplastic [Ananas comosus]
gb|OAY85982.1| Ribosome-binding factor PSRP1, chloroplastic [Ananas comosus]
Length = 313
Score = 127 bits (319), Expect = 2e-32
Identities = 68/105 (64%), Positives = 83/105 (79%), Gaps = 5/105 (4%)
Frame = -2
Query: 556 EEKDEEFAPVA---EGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGE 386
EE++++ A E EVLD++VRTKYFDMPPL+VEEA+EQLENVDH FYAFRNEETGE
Sbjct: 211 EEEEQDLAAPGLEEEDGEVLDKVVRTKYFDMPPLTVEEAREQLENVDHDFYAFRNEETGE 270
Query: 385 INILYKRKEGGYGLILPK-DGKVHNLAATTEHAR-EPAATERVSG 257
INILYKRK+GGYGLI+PK DG+V + T E A+ E E++SG
Sbjct: 271 INILYKRKDGGYGLIIPKDDGQVQKI--TEEPAKEEKTVAEQLSG 313
>ref|XP_008460813.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis
melo]
Length = 310
Score = 125 bits (315), Expect = 9e-32
Identities = 64/97 (65%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Frame = -2
Query: 553 EKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINIL 374
E +EE +G EV+D+IVRTKYFDMPPL+VEEA EQL+N+DH FY FRNEETGEINIL
Sbjct: 214 EDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINIL 273
Query: 373 YKRKEGGYGLILPKD-GKVHNL-AATTEHAREPAATE 269
YKRK+GGYGLI+PK+ G L T E AREP+ E
Sbjct: 274 YKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE 310
>pdb|5X8R|YY Chain y, Structure Of The 30s Small Subunit Of Chloroplast Ribosome
From Spinach
Length = 236
Score = 122 bits (306), Expect = 3e-31
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = -2
Query: 556 EEKDEEFAPVA-EGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEIN 380
EE + APV+ E + ++++VRTKYFDMPPL++ EA EQLENVDH FYAFRNEETG+IN
Sbjct: 139 EEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDIN 198
Query: 379 ILYKRKEGGYGLILPKDGKVHNL 311
ILYKRKEGGYGLI+PKDGK L
Sbjct: 199 ILYKRKEGGYGLIIPKDGKTEKL 221
>ref|XP_020261710.1| ribosome-binding factor PSRP1, chloroplastic [Asparagus
officinalis]
Length = 319
Score = 124 bits (311), Expect = 4e-31
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 3/103 (2%)
Frame = -2
Query: 556 EEKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINI 377
EE D + P + +LD++VRTKYFDMPPL+V EA EQ+ENVDH FY FRN ETGE+NI
Sbjct: 217 EEGDVQLLPTGDDGGILDEVVRTKYFDMPPLTVAEALEQIENVDHDFYGFRNIETGEVNI 276
Query: 376 LYKRKEGGYGLILP-KDG-KVHNL-AATTEHAREPAATERVSG 257
LYKRKEGGYGLI+P KDG KV +L T+ A EP E++SG
Sbjct: 277 LYKRKEGGYGLIIPKKDGNKVQDLETRVTDAAIEPHVAEQISG 319
>gb|ONK72725.1| uncharacterized protein A4U43_C04F22490 [Asparagus officinalis]
Length = 320
Score = 124 bits (311), Expect = 4e-31
Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 3/103 (2%)
Frame = -2
Query: 556 EEKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINI 377
EE D + P + +LD++VRTKYFDMPPL+V EA EQ+ENVDH FY FRN ETGE+NI
Sbjct: 217 EEGDVQLLPTGDDGGILDEVVRTKYFDMPPLTVAEALEQIENVDHDFYGFRNIETGEVNI 276
Query: 376 LYKRKEGGYGLILP-KDG-KVHNL-AATTEHAREPAATERVSG 257
LYKRKEGGYGLI+P KDG KV +L T+ A EP E++SG
Sbjct: 277 LYKRKEGGYGLIIPKKDGNKVQDLETRVTDAAIEPHVAEQISG 319
>ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis
sativus]
Length = 310
Score = 124 bits (310), Expect = 5e-31
Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Frame = -2
Query: 553 EKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINIL 374
E +EE +G EV+D+IVRTKYFDMPPL+VEEA EQL+N+DH FY FRNEETGEINIL
Sbjct: 214 EDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINIL 273
Query: 373 YKRKEGGYGLILPKD-GKVHNL-AATTEHAREPAATE 269
YKRK+GGYGLI+PK+ G L T E REP+ E
Sbjct: 274 YKRKDGGYGLIIPKENGTAEKLEPVTIEATREPSLAE 310
>ref|XP_021775053.1| ribosome-binding factor PSRP1, chloroplastic-like [Chenopodium
quinoa]
Length = 302
Score = 123 bits (309), Expect = 6e-31
Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = -2
Query: 556 EEKDEEFAPVA-EGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEIN 380
EE+ E PV+ E + ++++VRTKYFDMPPL+V EA EQLENVDH FYAFRNEETGEIN
Sbjct: 205 EEEMETAPPVSVEDDDFIEEVVRTKYFDMPPLTVTEAVEQLENVDHDFYAFRNEETGEIN 264
Query: 379 ILYKRKEGGYGLILPKDGKVHNL 311
ILYKRKEGGYGLI+PKDGK L
Sbjct: 265 ILYKRKEGGYGLIVPKDGKTEKL 287
>ref|XP_023551717.1| ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp.
pepo]
Length = 315
Score = 123 bits (309), Expect = 7e-31
Identities = 62/97 (63%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Frame = -2
Query: 553 EKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINIL 374
E +EE +G E +D+IVRTKYFDMPPL+VEEA EQL+N+DH FY FRNEETGEINIL
Sbjct: 219 EDEEEEVSQEDGGEAIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINIL 278
Query: 373 YKRKEGGYGLILPK-DGKVHNL-AATTEHAREPAATE 269
YKRK+GGYGLI+PK DG + T E ARE + E
Sbjct: 279 YKRKDGGYGLIIPKEDGNAEKIETVTVEVAREASLAE 315
>ref|XP_022922607.1| ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]
Length = 317
Score = 123 bits (309), Expect = 8e-31
Identities = 62/97 (63%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Frame = -2
Query: 553 EKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINIL 374
E +EE +G E +D+IVRTKYFDMPPL+VEEA EQL+N+DH FY FRNEETGEINIL
Sbjct: 221 EDEEEEVSQEDGGEAIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINIL 280
Query: 373 YKRKEGGYGLILPK-DGKVHNL-AATTEHAREPAATE 269
YKRK+GGYGLI+PK DG + T E ARE + E
Sbjct: 281 YKRKDGGYGLIIPKEDGNAEKIETVTVEVAREASLAE 317
>gb|PKA46560.1| Ribosome-binding factor PSRP1, chloroplastic [Apostasia
shenzhenica]
Length = 314
Score = 122 bits (307), Expect = 1e-30
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 6/106 (5%)
Frame = -2
Query: 556 EEKDEEFAPVAEGTE----VLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETG 389
EE++EE A + E +LD++VRTKYF+MPPL+VEEAK+QLENVDH FY FRN ET
Sbjct: 209 EEEEEEEAAESSSKELDSNILDEVVRTKYFEMPPLTVEEAKQQLENVDHDFYGFRNVETS 268
Query: 388 EINILYKRKEGGYGLILPK-DGKVHNLAATTE-HAREPAATERVSG 257
EINILYKRK+GGYGLI+PK +GK H E A+EP E++ G
Sbjct: 269 EINILYKRKDGGYGLIIPKEEGKEHRTEMVAEPAAKEPTVLEQMKG 314
>ref|XP_021763081.1| ribosome-binding factor PSRP1, chloroplastic [Chenopodium quinoa]
Length = 302
Score = 122 bits (306), Expect = 2e-30
Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = -2
Query: 556 EEKDEEFAPVA-EGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEIN 380
EE+ E PV+ E + ++++VRTKYFDMPPL+V EA EQLENVDH FYAFRNEETG+IN
Sbjct: 205 EEEMETAPPVSVEDDDFIEEVVRTKYFDMPPLTVTEAVEQLENVDHDFYAFRNEETGQIN 264
Query: 379 ILYKRKEGGYGLILPKDGKVHNL 311
ILYKRKEGGYGLI+PKDGK L
Sbjct: 265 ILYKRKEGGYGLIVPKDGKTEKL 287
>ref|XP_021858263.1| ribosome-binding factor PSRP1, chloroplastic [Spinacia oleracea]
gb|AAA34039.1| ribosomal protein 30S subunit [Spinacia oleracea]
Length = 302
Score = 122 bits (306), Expect = 2e-30
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = -2
Query: 556 EEKDEEFAPVA-EGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEIN 380
EE + APV+ E + ++++VRTKYFDMPPL++ EA EQLENVDH FYAFRNEETG+IN
Sbjct: 205 EEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDIN 264
Query: 379 ILYKRKEGGYGLILPKDGKVHNL 311
ILYKRKEGGYGLI+PKDGK L
Sbjct: 265 ILYKRKEGGYGLIIPKDGKTEKL 287
>sp|P19954.2|PRSP1_SPIOL RecName: Full=Ribosome-binding factor PSRP1, chloroplastic;
AltName: Full=30S ribosomal protein 1; AltName:
Full=CS-S5; Short=CS5; AltName: Full=Plastid-specific
30S ribosomal protein 1; Short=PSrp-1; AltName:
Full=Ribosomal protein 1; AltName: Full=S22; AltName:
Full=Translation factor pY; Flags: Precursor
pdb|5MMJ|YY Chain y, Structure Of The Small Subunit Of The Chloroplast Ribosome
pdb|5MMM|YY Chain y, Structure of the 70S chloroplast ribosome
emb|CAA41960.1| chloroplast ribosomal protein S22 (chloroplast) [Spinacia oleracea]
emb|CAA33403.1| spinach S22 r-protein [Spinacia oleracea]
gb|KNA06792.1| hypothetical protein SOVF_177810 [Spinacia oleracea]
Length = 302
Score = 122 bits (306), Expect = 2e-30
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = -2
Query: 556 EEKDEEFAPVA-EGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEIN 380
EE + APV+ E + ++++VRTKYFDMPPL++ EA EQLENVDH FYAFRNEETG+IN
Sbjct: 205 EEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDIN 264
Query: 379 ILYKRKEGGYGLILPKDGKVHNL 311
ILYKRKEGGYGLI+PKDGK L
Sbjct: 265 ILYKRKEGGYGLIIPKDGKTEKL 287
>ref|XP_008347268.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Malus
domestica]
Length = 214
Score = 119 bits (299), Expect = 2e-30
Identities = 58/98 (59%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Frame = -2
Query: 556 EEKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINI 377
E+++EE P + + +D++VRTKYFDMPPL+V EA +QLENVDH FYAFRNEETGEIN+
Sbjct: 117 EDEEEEAVPQEQEEDFIDEVVRTKYFDMPPLTVAEAVDQLENVDHDFYAFRNEETGEINV 176
Query: 376 LYKRKEGGYGLILPK-DGKVHNLA-ATTEHAREPAATE 269
+YKR+EGGYGLI+PK +GK E ARE + E
Sbjct: 177 IYKREEGGYGLIIPKGNGKAEKSEHVVVERARERSLAE 214
>ref|XP_016181343.1| ribosome-binding factor PSRP1, chloroplastic [Arachis ipaensis]
Length = 295
Score = 121 bits (304), Expect = 3e-30
Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Frame = -2
Query: 547 DEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINILYK 368
DEE E E +D++VRTKYFDMPPL+V EA EQLENVDH FYAFRNEETGEINI+YK
Sbjct: 201 DEEEISAKEEEETIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYAFRNEETGEINIVYK 260
Query: 367 RKEGGYGLILPK-DGKVHNL-AATTEHAREPAATE 269
RKEGGYGLI+PK DG+ L E ARE + E
Sbjct: 261 RKEGGYGLIIPKGDGEAQKLEPLVIEQAREHSLKE 295
>ref|XP_010251453.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Nelumbo
nucifera]
Length = 330
Score = 122 bits (306), Expect = 3e-30
Identities = 62/97 (63%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Frame = -2
Query: 553 EKDEEFAPVAEGTEVLDQIVRTKYFDMPPLSVEEAKEQLENVDHSFYAFRNEETGEINIL 374
E+D E P E + +D+IVRTKYF+MPPL+V EA EQLEN+DH FY FRNEETGEINIL
Sbjct: 234 EEDVETVPQQEEGDFIDEIVRTKYFNMPPLTVNEALEQLENIDHDFYGFRNEETGEINIL 293
Query: 373 YKRKEGGYGLILPK-DGKVHNL-AATTEHAREPAATE 269
YKRK GGYGLI+PK DGK L E A+EP+ E
Sbjct: 294 YKRKAGGYGLIIPKGDGKTETLEPVVMEPAKEPSMAE 330