BLASTX nr result
ID: Cheilocostus21_contig00010829
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00010829
(793 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009398771.1| PREDICTED: DNA topoisomerase 1 [Musa acumina... 157 9e-40
ref|XP_009407901.1| PREDICTED: DNA topoisomerase 1-like isoform ... 153 2e-38
ref|XP_008782916.2| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 125 8e-29
ref|XP_010928876.1| PREDICTED: DNA topoisomerase 1 alpha [Elaeis... 116 1e-25
ref|XP_009411876.1| PREDICTED: DNA topoisomerase 1 [Musa acumina... 114 4e-25
ref|XP_010913963.1| PREDICTED: DNA topoisomerase 1 alpha-like is... 106 3e-22
ref|XP_008798752.1| PREDICTED: DNA topoisomerase 1-like [Phoenix... 94 8e-18
gb|ONK70111.1| uncharacterized protein A4U43_C05F30370 [Asparagu... 71 4e-10
ref|XP_020265341.1| DNA topoisomerase 1 beta-like [Asparagus off... 71 4e-10
ref|XP_020271598.1| DNA topoisomerase 1 beta-like [Asparagus off... 68 4e-09
dbj|BAJ84827.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 3e-06
ref|XP_020111559.1| DNA topoisomerase 1 alpha-like isoform X2 [A... 59 5e-06
ref|XP_020111558.1| DNA topoisomerase 1 beta-like isoform X1 [An... 59 5e-06
gb|OAY66604.1| DNA topoisomerase 1 [Ananas comosus] 58 7e-06
ref|XP_020110487.1| DNA topoisomerase 1 alpha-like isoform X2 [A... 58 9e-06
ref|XP_020110486.1| DNA topoisomerase 1 alpha-like isoform X1 [A... 58 9e-06
>ref|XP_009398771.1| PREDICTED: DNA topoisomerase 1 [Musa acuminata subsp. malaccensis]
Length = 948
Score = 157 bits (396), Expect = 9e-40
Identities = 108/268 (40%), Positives = 141/268 (52%), Gaps = 8/268 (2%)
Frame = -3
Query: 785 RRPNSVSKQGQ-----KIDPQKYDSGNVASHQSARNGENANLQNAKLLSNTKAASEXXXX 621
+RPNS SKQ K QK+D N+ S Q ARNGEN+ LQ+A++L K +E
Sbjct: 25 KRPNSSSKQSHLSSTSKKTTQKHDGSNLVSGQIARNGENSRLQSAEVLPTAKTLNEKPIS 84
Query: 620 XXXXXXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVASAST 441
+ K TTN++ KY+D S+ +++SDDSDD KPL+ R+ S
Sbjct: 85 HSQSSVSVQSKHIS----YHKSTTNDVRPKYQDVSSLEVRESDDSDDGKPLSHRLNSPPA 140
Query: 440 VVHKRSFMNSEK--LQSPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXXXXX 267
V K++ M SEK + S DHKF+NKSTDK+N+D+ IK E+SDD DD K LS +F
Sbjct: 141 AVQKKNTMGSEKTHMHSSDHKFVNKSTDKMNLDKPIIKREDSDDSDDEKPLSLKFSSSTV 200
Query: 266 XXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDSEDE 87
SH A + QS ++ S K+N K S DSEDE
Sbjct: 201 VNKGGPSH-AMKTQSAKPTLLPSLKINSDIKGC--------------------SDDSEDE 239
Query: 86 KPLLARIQSKNTG-SSMKISNGTEKLLS 6
KPLL+R QSK G SSMK S +K LS
Sbjct: 240 KPLLSRFQSKAIGSSSMKSSTSDDKPLS 267
>ref|XP_009407901.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Musa acuminata
subsp. malaccensis]
ref|XP_009407902.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 951
Score = 153 bits (386), Expect = 2e-38
Identities = 102/269 (37%), Positives = 144/269 (53%), Gaps = 9/269 (3%)
Frame = -3
Query: 785 RRPNSVSKQGQ------KIDPQKYDSGNVASHQSARNGENANLQNAKLLSNTKAASEXXX 624
+RPNS SKQ + K PQKYD N+ S+Q+ NG+N++ QNAK+ S K +SE
Sbjct: 25 KRPNSSSKQSRLICSSKKTAPQKYDGFNITSNQNVGNGDNSHFQNAKVFSTVKPSSEKPN 84
Query: 623 XXXXXXXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVASAS 444
+ K TTN++ +++D+S+ +++ DDS+D+KPL+ R+ S S
Sbjct: 85 VAISSSRSWASVQDTS---YHKSTTNDVGLEHQDKSSPEVQELDDSNDDKPLSHRLNSVS 141
Query: 443 TVVHKRSFMNSEKLQ--SPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXXXX 270
V K++ + EK+ S DHKF+ KSTDK+++D+ IK+E+SD DD K LS++F
Sbjct: 142 VAVQKKNSTDLEKIDMHSLDHKFVKKSTDKMDLDKPIIKNEDSDYSDDDKPLSYKFSSSA 201
Query: 269 XXXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDSED 90
S K PQS + S K+N + S DSED
Sbjct: 202 AVNKSGFSRVMKAPQSSKPTSPPSMKMNSNIEGF--------------------SDDSED 241
Query: 89 EKPLLARIQSKNT-GSSMKISNGTEKLLS 6
EKPLL+R QSK T GSSMK SN EK S
Sbjct: 242 EKPLLSRFQSKATGGSSMKGSNSDEKPFS 270
>ref|XP_008782916.2| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Phoenix
dactylifera]
Length = 950
Score = 125 bits (314), Expect = 8e-29
Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 17/274 (6%)
Frame = -3
Query: 785 RRPNSVSKQGQ------KIDPQKYDS--GNVASHQSARNGENANLQNAKLLSNTKAASEX 630
+R NS SKQ Q K Q+ DS G + S +S N N+N Q K+ S KAASE
Sbjct: 25 KRSNSASKQKQLNSASKKSTSQRCDSSLGKLRSEKSVTNYGNSNFQKNKITSTVKAASEK 84
Query: 629 XXXXXXXXXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVAS 450
H KL +N+ ++ + D + SDDSDD+KPL+ R+ +
Sbjct: 85 SESMVAGSNSRIADQSKHFAEH-KLASNSKETAHLDNICADAESSDDSDDDKPLSHRLNA 143
Query: 449 ASTVVHKRSFMNSEKLQSPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXXXX 270
AS V H+ + M+++ S +HK S DK+++D+ KSE+SDD DD K LS +F
Sbjct: 144 ASMVFHRNNSMHAD---SSEHKLATSSKDKMDLDKPCNKSEDSDDSDDDKPLSSKFSSSV 200
Query: 269 XXXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDS-- 96
SH K +S + +S+KL + K ++PLL+ QPK G + +
Sbjct: 201 VVEKSSSSHAKKVFESPRHTSLSSQKLKERTKEDSDDSEDDEPLLSRFQPKSAGGASTKI 260
Query: 95 --EDEKPLLARIQ-----SKNTGSSMKISNGTEK 15
+DEKPL ++++ K T + ++ S G K
Sbjct: 261 SDDDEKPLASKVKPNGSVKKGTSNELRFSKGANK 294
>ref|XP_010928876.1| PREDICTED: DNA topoisomerase 1 alpha [Elaeis guineensis]
Length = 956
Score = 116 bits (290), Expect = 1e-25
Identities = 87/277 (31%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Frame = -3
Query: 785 RRPNSVSKQGQ------KIDPQKYDS--GNVASHQSARNGENANLQNAKLLSNTKAASEX 630
+RPNS SKQ Q K Q+ DS G + S +SA N N+N Q K+ S KA SE
Sbjct: 25 KRPNSASKQSQLNSALKKSVSQRCDSSLGKLTSEKSAMNHGNSNFQKNKITSTVKAPSEK 84
Query: 629 XXXXXXXXXXXXXXXXXXXXSHDKL-TTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVA 453
+K T+N+ ++ + D + SDDSDD+KPL+ R+
Sbjct: 85 SKSIIAGSNSRIALPDRSKHLPEKKPTSNSRETMHLDNICADAESSDDSDDDKPLSHRLN 144
Query: 452 SASTVVHKRSFMNSEKL--QSPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFX 279
+AS V K + M+ EK+ S +HK S DK+++D+ K E+SDD DD K LS +F
Sbjct: 145 AASMVFQKNNSMHPEKVVNHSSEHKLATSSKDKMDLDKPCRKREDSDDSDDDKPLSSKF- 203
Query: 278 XXXXXXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSD 99
H K +S + +++K+ K +KPLL QPK +G +
Sbjct: 204 SSSVVEKNSSLHSKKVLESPRHASPSAQKVQESTKEDSDDSEDDKPLLFRFQPKSSGGAS 263
Query: 98 S----EDEKPLLARIQ-----SKNTGSSMKISNGTEK 15
+ +DEKPL +++ K T + ++ G K
Sbjct: 264 TKISDDDEKPLAFKVKPNGSIKKGTSNELRFPKGANK 300
>ref|XP_009411876.1| PREDICTED: DNA topoisomerase 1 [Musa acuminata subsp. malaccensis]
Length = 926
Score = 114 bits (286), Expect = 4e-25
Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 3/188 (1%)
Frame = -3
Query: 560 KLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVASASTVVHKRSFMNSEKLQ--SPDH 387
K TT+++ +++DES +++SDDSDD+KPL+ R+ SAS V K+ FM+SEK+ S DH
Sbjct: 79 KSTTSHVKPQHQDESIAEVQNSDDSDDDKPLSHRLNSASVAVQKKFFMDSEKIHKHSSDH 138
Query: 386 KFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXXXXXXXXXXXSHKAKEPQSGISSV 207
F +T+K+ +D++ I++E S+D DD+K LS + SH K PQS +
Sbjct: 139 YFAKNNTNKMIVDKSIIRNEESNDSDDNKPLSSKISSIAACSTGGPSHVVKLPQSAKPTS 198
Query: 206 HASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDSEDEKPLLARIQSK-NTGSSMKIS 30
H S K+N K S DSEDEKPL++R QSK GSS+K
Sbjct: 199 HPSMKVNSNIKED--------------------SDDSEDEKPLISRFQSKVFGGSSVKNP 238
Query: 29 NGTEKLLS 6
+ +K LS
Sbjct: 239 DSYQKSLS 246
>ref|XP_010913963.1| PREDICTED: DNA topoisomerase 1 alpha-like isoform X1 [Elaeis
guineensis]
ref|XP_019704056.1| PREDICTED: DNA topoisomerase 1 alpha-like isoform X1 [Elaeis
guineensis]
Length = 951
Score = 106 bits (264), Expect = 3e-22
Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 12/272 (4%)
Frame = -3
Query: 785 RRPNSVSKQGQKIDPQKYDS--------GNVASHQSARNGENANLQNAKLLSNTKAASEX 630
+RPNS S+Q Q K + G +AS + N N+N Q K+ KA SE
Sbjct: 26 KRPNSASRQSQLNSGSKKPASQKRINSLGKLASDEGTPNYGNSNFQKNKMTCTVKAPSEK 85
Query: 629 XXXXXXXXXXXXXXXXXXXXSHD-KLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVA 453
+ KLT+NN ++ + D ++SDDSDD+KPL+ R+
Sbjct: 86 SKSIIAGSNSRTSFPDQSKHFAEQKLTSNNNETTHLDNFGADAENSDDSDDDKPLSHRLN 145
Query: 452 SASTVVHKRSFMNSEKL--QSPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFX 279
+ S V K + ++ EK+ S +HK K+N+D+ K E+SDD DD KTLS +F
Sbjct: 146 AVSMAVQKNNSVHMEKVANHSSEHKLATSCKGKMNLDKPCGKIEDSDDSDDDKTLSSKFS 205
Query: 278 XXXXXXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSD 99
S + +S + +S+KL I +D S D
Sbjct: 206 SSVVAEKNSFSQAKRALESPRPTSLSSQKLK------------------EIAKED--SDD 245
Query: 98 SEDEKPLLARIQSKNT-GSSMKISNGTEKLLS 6
SED+KPLL+R Q+K+T G+S K+S+ K L+
Sbjct: 246 SEDDKPLLSRFQTKSTGGASTKLSDSVGKPLA 277
>ref|XP_008798752.1| PREDICTED: DNA topoisomerase 1-like [Phoenix dactylifera]
Length = 948
Score = 93.6 bits (231), Expect = 8e-18
Identities = 86/274 (31%), Positives = 128/274 (46%), Gaps = 14/274 (5%)
Frame = -3
Query: 785 RRPNSVSKQGQ------KIDPQKY-DSGNVASHQSARNGENANLQNAKLLSNTKAASEXX 627
+R N SK+ Q K QK+ +S + + N N+N ++ KA SE
Sbjct: 25 KRTNPASKRSQLNSASKKPASQKHINSLGKLADKGTPNYGNSNFPKIEMTCTVKAPSEKS 84
Query: 626 XXXXXXXXXXXXXXXXXXXSHD-KLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVAS 450
+ KLT+NN + + + A ++SDDSDD+KPL+ R+ +
Sbjct: 85 KSIIAGSNSRTALPDQSKHFAEQKLTSNNNKTTHYNFCANA-ENSDDSDDDKPLSHRLNA 143
Query: 449 ASTVVHKRSFMNSEKL--QSPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXX 276
STVV K + M+ EK+ S +HK K+ +D+ K+E+SDD DD K LS +F
Sbjct: 144 VSTVVQKNNSMHMEKVVNHSSEHKLATSCKGKMTLDKPCGKNEDSDDSDDDKPLSSKFS- 202
Query: 275 XXXXXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDT---GS 105
SSV A K +L K L++ +PK++ S
Sbjct: 203 --------------------SSVVAGKNSSLHAKQALESPRHTS--LSSQKPKESTKEDS 240
Query: 104 SDSEDEKPLLARIQSKNT-GSSMKISNGTEKLLS 6
DSED+KPLL+R Q K+T G+S K S+ EK L+
Sbjct: 241 DDSEDDKPLLSRFQPKSTGGASTKNSHSVEKPLA 274
>gb|ONK70111.1| uncharacterized protein A4U43_C05F30370 [Asparagus officinalis]
Length = 926
Score = 70.9 bits (172), Expect = 4e-10
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 4/261 (1%)
Frame = -3
Query: 776 NSVSKQGQKIDPQKYDSGNVASHQSARNGENANLQNAKLLSNTKAASEXXXXXXXXXXXX 597
NS SK+ P++ G QSA NGE+++L K+ S ++E
Sbjct: 40 NSASKKPSSQKPEE-TRGRPIESQSACNGESSSLHKNKVTSTANVSTEKSGAVCSNFGAS 98
Query: 596 XXXXXXXXXSHDKLTTN--NLDSKYEDESARGIKDSDDSDDNKPLNQRVASASTVVHKRS 423
+ ++ +L + DE ++DSDDSDD+KPL+ R +AS + K
Sbjct: 99 VPSQSNHSSRNRSSSSGAKSLHTNTCDE----VEDSDDSDDDKPLSSRFNTASVALQKAY 154
Query: 422 FMNSEKLQ--SPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXXXXXXXXXXX 249
++ +K+ S ++K + DK+ +D++ +S SDD DD + LS RF
Sbjct: 155 SIDHQKVAQGSLENKARGEGADKMILDKSCPRSVVSDDSDDEQPLSARF----------- 203
Query: 248 SHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDSEDEKPLLAR 69
P + + S P Q S SEDEKPLL+R
Sbjct: 204 ----SSPSGAVQKSNES----------------PVPTSTPSQKIKATSYYSEDEKPLLSR 243
Query: 68 IQSKNTGSSMKISNGTEKLLS 6
+ + G+++K +K L+
Sbjct: 244 LSKSSVGTTIKKFKSMKKPLA 264
>ref|XP_020265341.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
ref|XP_020265342.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
Length = 950
Score = 70.9 bits (172), Expect = 4e-10
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 4/261 (1%)
Frame = -3
Query: 776 NSVSKQGQKIDPQKYDSGNVASHQSARNGENANLQNAKLLSNTKAASEXXXXXXXXXXXX 597
NS SK+ P++ G QSA NGE+++L K+ S ++E
Sbjct: 40 NSASKKPSSQKPEE-TRGRPIESQSACNGESSSLHKNKVTSTANVSTEKSGAVCSNFGAS 98
Query: 596 XXXXXXXXXSHDKLTTN--NLDSKYEDESARGIKDSDDSDDNKPLNQRVASASTVVHKRS 423
+ ++ +L + DE ++DSDDSDD+KPL+ R +AS + K
Sbjct: 99 VPSQSNHSSRNRSSSSGAKSLHTNTCDE----VEDSDDSDDDKPLSSRFNTASVALQKAY 154
Query: 422 FMNSEKLQ--SPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXXXXXXXXXXX 249
++ +K+ S ++K + DK+ +D++ +S SDD DD + LS RF
Sbjct: 155 SIDHQKVAQGSLENKARGEGADKMILDKSCPRSVVSDDSDDEQPLSARF----------- 203
Query: 248 SHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDSEDEKPLLAR 69
P + + S P Q S SEDEKPLL+R
Sbjct: 204 ----SSPSGAVQKSNES----------------PVPTSTPSQKIKATSYYSEDEKPLLSR 243
Query: 68 IQSKNTGSSMKISNGTEKLLS 6
+ + G+++K +K L+
Sbjct: 244 LSKSSVGTTIKKFKSMKKPLA 264
>ref|XP_020271598.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
ref|XP_020271602.1| DNA topoisomerase 1 beta-like [Asparagus officinalis]
Length = 936
Score = 67.8 bits (164), Expect = 4e-09
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 10/267 (3%)
Frame = -3
Query: 785 RRPNSVSKQG------QKIDPQKYDSGN---VASHQSAR-NGENANLQNAKLLSNTKAAS 636
+R N+ SKQ +K QK++ V+SH NGE+++ Q K++SN K +S
Sbjct: 27 KRTNTTSKQSHLNSALKKSLSQKHEETRERPVSSHNVRNGNGESSSSQKNKVISNAKLSS 86
Query: 635 EXXXXXXXXXXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRV 456
+ L + ++ + + + S +++SDDSDD KPL+ R
Sbjct: 87 AKSSAVTSNSGASSLRQPNHSSKNG-LPSVSVKTSHTNNSCDKVENSDDSDDGKPLSSRF 145
Query: 455 ASASTVVHKRSFMNSEKLQSPDHKFLNKSTDKLNMDQTTIKSENSDDCDDHKTLSFRFXX 276
SAS V K + +N + H +K+ ++ +++ +K E SDD +D LS +F
Sbjct: 146 NSASVAVQKTNSLNPATARVVKHSLEHKAGNENVDNKSRVKREVSDDSEDGLPLSAKFP- 204
Query: 275 XXXXXXXXXSHKAKEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQPKDTGSSDS 96
SS A ++ N K A + DS
Sbjct: 205 --------------------SSSGAVQRSNPSPMPTSTTSQKIKESTAAT------TGDS 238
Query: 95 EDEKPLLARIQSKNTGSSMKISNGTEK 15
EDEKPL +R+ SK SS+ +G+EK
Sbjct: 239 EDEKPLSSRLPSK---SSVIKKSGSEK 262
>dbj|BAJ84827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 946
Score = 59.3 bits (142), Expect = 3e-06
Identities = 67/202 (33%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Frame = -3
Query: 551 TNNLD-SKYEDESARGIKDSDDSDDNKPLNQRVASASTVVHKRSFMNSEKLQSPDHKFL- 378
+N +D SK + A G K SDDSDD+KPL R + + + + DHK L
Sbjct: 96 SNTVDKSKMKRPHAEGNK-SDDSDDDKPLAFRKKPDTKLKKVVAGGENAYDSDDDHKPLG 154
Query: 377 ----------NKSTDKLNMDQTTIKSENSDDC--DDHKTLSFRFXXXXXXXXXXXSHKAK 234
N ST K + +T K+ DD DDHK L RF + AK
Sbjct: 155 MNINSAKVASNNSTSKTVLVKTAPKTVQPDDDSDDDHKPLGQRF------------NSAK 202
Query: 233 EPQSGISSVHASKKLNLKNKXXXXXXXXEKPLLATIQP----KDTGS-SDSEDEKPLLAR 69
S ++ K K EKPL + + K GS SDSEDEKPL AR
Sbjct: 203 GASSNSTNKPVLLKSEPKIVQSDDDSEDEKPLASRLPTNAASKSRGSASDSEDEKPLSAR 262
Query: 68 IQSKNTGSSMKISNGTEKLLSH 3
G+S+ ISN +KL S+
Sbjct: 263 FSRGTAGTSVSISNSKDKLPSN 284
>ref|XP_020111559.1| DNA topoisomerase 1 alpha-like isoform X2 [Ananas comosus]
Length = 804
Score = 58.5 bits (140), Expect = 5e-06
Identities = 78/292 (26%), Positives = 119/292 (40%), Gaps = 43/292 (14%)
Frame = -3
Query: 782 RPNSVSKQGQKIDPQKYDSG--NVASHQSARNGENANLQNAKLLSNTKAASEXXXXXXXX 609
R +S++ K QK D S S+ NGEN+NLQ +K S +K +E
Sbjct: 31 RHSSLNSTSNKSTSQKRDISLQRARSDHSSPNGENSNLQKSKGTSTSKMPTERPKIPNPV 90
Query: 608 XXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVASASTVV-- 435
+K TT+++D R ++SDDSDDN PL+QR AS +V
Sbjct: 91 SRSSVPGPPNHSS-ENKHTTSSMD---RTNLKRPHENSDDSDDNIPLSQRANPASKMVKH 146
Query: 434 --HKRSFMNSEKLQSPD---------HKFLNKSTDKLNMDQTTIKS--ENSDDCDDHKTL 294
+R + + S D K+ + K+ + +S E++DD +D K L
Sbjct: 147 FSEQRDTSHGKVEPSSDSDDDNKPLISKYSSVGAGKVPASSSKNRSGKESADDSEDKKPL 206
Query: 293 SFRFXXXXXXXXXXXSHKAKEPQSGISSVHAS--KKLNLKNKXXXXXXXXEKPL------ 138
+ + KA +G V +S +K+N +K EKPL
Sbjct: 207 ASKV-------------KANASTAGAEHVASSSARKINSSSKENADDSEDEKPLAFKFKA 253
Query: 137 ---------LATIQPKDTGSS----DSEDEKPLLARIQS-----KNTGSSMK 36
+A+ K SS DSED KPL ++I++ K TGS +
Sbjct: 254 NAATTGAGQVASSSSKKINSSSKANDSEDRKPLASKIKANMSIKKETGSESR 305
>ref|XP_020111558.1| DNA topoisomerase 1 beta-like isoform X1 [Ananas comosus]
Length = 970
Score = 58.5 bits (140), Expect = 5e-06
Identities = 78/292 (26%), Positives = 119/292 (40%), Gaps = 43/292 (14%)
Frame = -3
Query: 782 RPNSVSKQGQKIDPQKYDSG--NVASHQSARNGENANLQNAKLLSNTKAASEXXXXXXXX 609
R +S++ K QK D S S+ NGEN+NLQ +K S +K +E
Sbjct: 31 RHSSLNSTSNKSTSQKRDISLQRARSDHSSPNGENSNLQKSKGTSTSKMPTERPKIPNPV 90
Query: 608 XXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVASASTVV-- 435
+K TT+++D R ++SDDSDDN PL+QR AS +V
Sbjct: 91 SRSSVPGPPNHSS-ENKHTTSSMD---RTNLKRPHENSDDSDDNIPLSQRANPASKMVKH 146
Query: 434 --HKRSFMNSEKLQSPD---------HKFLNKSTDKLNMDQTTIKS--ENSDDCDDHKTL 294
+R + + S D K+ + K+ + +S E++DD +D K L
Sbjct: 147 FSEQRDTSHGKVEPSSDSDDDNKPLISKYSSVGAGKVPASSSKNRSGKESADDSEDKKPL 206
Query: 293 SFRFXXXXXXXXXXXSHKAKEPQSGISSVHAS--KKLNLKNKXXXXXXXXEKPL------ 138
+ + KA +G V +S +K+N +K EKPL
Sbjct: 207 ASKV-------------KANASTAGAEHVASSSARKINSSSKENADDSEDEKPLAFKFKA 253
Query: 137 ---------LATIQPKDTGSS----DSEDEKPLLARIQS-----KNTGSSMK 36
+A+ K SS DSED KPL ++I++ K TGS +
Sbjct: 254 NAATTGAGQVASSSSKKINSSSKANDSEDRKPLASKIKANMSIKKETGSESR 305
>gb|OAY66604.1| DNA topoisomerase 1 [Ananas comosus]
Length = 970
Score = 58.2 bits (139), Expect = 7e-06
Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 38/293 (12%)
Frame = -3
Query: 782 RPNSVSKQGQKIDPQKYDSG--NVASHQSARNGENANLQNAKLLSNTKAASEXXXXXXXX 609
R +S++ K QK D S S+ NGEN+NLQ +K S +K +E
Sbjct: 31 RHSSLNSTSNKSTSQKRDISLQRARSDHSSPNGENSNLQKSKGTSTSKMPTERPKIPNPV 90
Query: 608 XXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVASASTVV-- 435
+K TT+++D + R ++SDDSDDN PL+QR AS +V
Sbjct: 91 SRSSVPGPPNHSS-ENKHTTSSMD---KTNLKRPHENSDDSDDNIPLSQRANPASKMVKH 146
Query: 434 --HKRSFMNSEKLQSPD---------HKFLNKSTDKLNMDQTTIKS--ENSDDCDDHKTL 294
+R + + S D K+ + K+ + +S E++DD +D K L
Sbjct: 147 FSEQRDTSHGKVEPSSDSDDDNKPLISKYSSVGAGKVPASSSKNRSGKESADDSEDKKPL 206
Query: 293 SFRFXXXXXXXXXXXSHKAKEPQSGISSVHAS--KKLNLKNKXXXXXXXXEKPL------ 138
+ + KA +G V +S +K+N +K EKPL
Sbjct: 207 ASKV-------------KANASTAGAEHVASSSARKINSSSKENADDSEDEKPLAFKFKA 253
Query: 137 ---------LATIQPKDTGSS----DSEDEKPLLARIQSKNTGSSMKISNGTE 18
+A+ K SS DSED KPL ++I++ S+K G E
Sbjct: 254 NAATTGAGQVASSSSKKISSSSKANDSEDRKPLASKIKA---NMSIKKETGNE 303
>ref|XP_020110487.1| DNA topoisomerase 1 alpha-like isoform X2 [Ananas comosus]
Length = 765
Score = 57.8 bits (138), Expect = 9e-06
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 31/284 (10%)
Frame = -3
Query: 785 RRPNSVSKQGQKIDPQK-------YDS--GNVASHQSARNGENANLQNAKLLSNTKAASE 633
+RP+S SK GQ K Y+S G S++ + NGEN+N Q K +S K +++
Sbjct: 25 KRPSS-SKNGQINSSLKKPASQNHYNSSLGRTTSNKHSSNGENSNSQKNKAISAVKISNQ 83
Query: 632 XXXXXXXXXXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVA 453
+ +N+ S + +++DDSDD+KPL R+
Sbjct: 84 NPRSTSLVSRA-------------SVPVSNVKSTHLQRPHSEAENTDDSDDDKPLTYRLN 130
Query: 452 SASTVVHKRSFMNSEK-LQSPDHKFLNKSTDKLNMDQTTI--------KSENSDDCDDHK 300
SAS K + M E+ + +F S D + ++ K E SDD +D K
Sbjct: 131 SASAASQKSNSMLVERAILDSKSEFSYDSDDNRPLSSKSLPAVTEKGSKKEYSDDSEDDK 190
Query: 299 TLSFRFXXXXXXXXXXXSHKA--KEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLL--- 135
L R + + KE S + K L + +KP +
Sbjct: 191 PLLSRLPLKSTSASKVAPNASIKKESSSDLGFTKGLNKRPLGDSNSSIGPSIKKPKIFNS 250
Query: 134 -ATIQPKDTGS-------SDSEDEKPLLARIQSKNTGSSMKISN 27
A+++ KD GS D +D+ PL R+++ + SN
Sbjct: 251 SASVKVKDEGSVKEELKTEDDDDDIPLSQRLKNSQSSERKPSSN 294
>ref|XP_020110486.1| DNA topoisomerase 1 alpha-like isoform X1 [Ananas comosus]
gb|OAY76967.1| DNA topoisomerase 1 [Ananas comosus]
Length = 885
Score = 57.8 bits (138), Expect = 9e-06
Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 31/284 (10%)
Frame = -3
Query: 785 RRPNSVSKQGQKIDPQK-------YDS--GNVASHQSARNGENANLQNAKLLSNTKAASE 633
+RP+S SK GQ K Y+S G S++ + NGEN+N Q K +S K +++
Sbjct: 25 KRPSS-SKNGQINSSLKKPASQNHYNSSLGRTTSNKHSSNGENSNSQKNKAISAVKISNQ 83
Query: 632 XXXXXXXXXXXXXXXXXXXXXSHDKLTTNNLDSKYEDESARGIKDSDDSDDNKPLNQRVA 453
+ +N+ S + +++DDSDD+KPL R+
Sbjct: 84 NPRSTSLVSRA-------------SVPVSNVKSTHLQRPHSEAENTDDSDDDKPLTYRLN 130
Query: 452 SASTVVHKRSFMNSEK-LQSPDHKFLNKSTDKLNMDQTTI--------KSENSDDCDDHK 300
SAS K + M E+ + +F S D + ++ K E SDD +D K
Sbjct: 131 SASAASQKSNSMLVERAILDSKSEFSYDSDDNRPLSSKSLPAVTEKGSKKEYSDDSEDDK 190
Query: 299 TLSFRFXXXXXXXXXXXSHKA--KEPQSGISSVHASKKLNLKNKXXXXXXXXEKPLL--- 135
L R + + KE S + K L + +KP +
Sbjct: 191 PLLSRLPLKSTSASKVAPNASIKKESSSDLGFTKGLNKRPLGDSNSSIGPSIKKPKIFNS 250
Query: 134 -ATIQPKDTGS-------SDSEDEKPLLARIQSKNTGSSMKISN 27
A+++ KD GS D +D+ PL R+++ + SN
Sbjct: 251 SASVKVKDEGSVKEELKTEDDDDDIPLSQRLKNSQSSERKPSSN 294